RNA–Protein interactions for RNA: ENST00000360752.4

RDH16-201, Transcript of retinol dehydrogenase 16, humanhuman

TSL 1 (best)

Gene RDH16, Length 3,198 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH16-201ENST00000360752 NISCHQ9Y2I1 1504 aa18.93■□□□□ 0.62
RDH16-201ENST00000360752 SHROOM4Q9ULL8 1493 aa17.04■□□□□ 0.32
RDH16-201ENST00000360752 SUPT5HO00267 1087 aaKnown RBP16.84■□□□□ 0.29
RDH16-201ENST00000360752 DCAF8L2P0C7V8 631 aa16.5■□□□□ 0.23
RDH16-201ENST00000360752 PCGF6Q9BYE7 350 aa16.2■□□□□ 0.18
RDH16-201ENST00000360752 CHIC1Q5VXU3 224 aa16.14■□□□□ 0.17
RDH16-201ENST00000360752 MYO15BQ96JP2 1530 aa16.14■□□□□ 0.17
RDH16-201ENST00000360752 HRCP23327 699 aa16.08■□□□□ 0.17
RDH16-201ENST00000360752 PPARGC1BQ86YN6 1023 aaKnown RBP16.06■□□□□ 0.16
RDH16-201ENST00000360752 ZCCHC6Q5VYS8 1495 aaKnown RBP16■□□□□ 0.15
RDH16-201ENST00000360752 LOC105371045A0A1W2PR82 267 aa15.94■□□□□ 0.14
RDH16-201ENST00000360752 EHMT2Q96KQ7 1210 aa15.8■□□□□ 0.12
RDH16-201ENST00000360752 PELP1Q8IZL8 1130 aaKnown RBP15.74■□□□□ 0.11
RDH16-201ENST00000360752 CCDC180Q9P1Z9 1646 aa15.68■□□□□ 0.1
RDH16-201ENST00000360752 FAM9AQ8IZU1 332 aaPredicted RBP15.67■□□□□ 0.1
RDH16-201ENST00000360752 TRIM26Q12899 539 aaPredicted RBP15.54■□□□□ 0.08
RDH16-201ENST00000360752 DCAF1Q9Y4B6 1507 aa15.48■□□□□ 0.07
RDH16-201ENST00000360752 TRIM41Q8WV44 630 aa15.46■□□□□ 0.07
RDH16-201ENST00000360752 SCAF1Q9H7N4 1312 aaKnown RBP15.46■□□□□ 0.07
RDH16-201ENST00000360752 TTBK1Q5TCY1 1321 aaPredicted RBP15.31■□□□□ 0.04
RDH16-201ENST00000360752 SCRIBQ14160 1630 aa15.26■□□□□ 0.03
RDH16-201ENST00000360752 RSF1Q96T23 1441 aaPredicted RBP15.2■□□□□ 0.02
RDH16-201ENST00000360752 ZEB1P37275 1124 aaPredicted RBP15.19■□□□□ 0.02
RDH16-201ENST00000360752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.16■□□□□ 0.02
RDH16-201ENST00000360752 ABCC9O60706 1549 aa15.14■□□□□ 0.01
RDH16-201ENST00000360752 RB1CC1Q8TDY2 1594 aa15.14■□□□□ 0.01
RDH16-201ENST00000360752 MYT1Q01538 1121 aa15.12■□□□□ 0.01
RDH16-201ENST00000360752 CCER1Q8TC90 406 aaPredicted RBP15.09■□□□□ 0.01
RDH16-201ENST00000360752 CECR2Q9BXF3 1484 aa14.98□□□□□ -0.01
RDH16-201ENST00000360752 NEUROD1Q13562 356 aa14.97□□□□□ -0.01
RDH16-201ENST00000360752 GTF3C3Q9Y5Q9 886 aa14.95□□□□□ -0.02
RDH16-201ENST00000360752 ACIN1Q9UKV3 1341 aaKnown RBP14.92□□□□□ -0.02
RDH16-201ENST00000360752 MROH2BQ7Z745 1585 aa14.86□□□□□ -0.03
RDH16-201ENST00000360752 DIEXFQ68CQ4 756 aaKnown RBP14.84□□□□□ -0.03
RDH16-201ENST00000360752 YTHDC1Q96MU7 727 aaKnown RBP14.84□□□□□ -0.03
RDH16-201ENST00000360752 UBTFP17480 764 aaKnown RBP14.81□□□□□ -0.04
RDH16-201ENST00000360752 WIZO95785 1651 aa14.8□□□□□ -0.04
RDH16-201ENST00000360752 RANGAP1P46060 587 aaPredicted RBP14.8□□□□□ -0.04
RDH16-201ENST00000360752 CENPBP07199 599 aaPredicted RBP14.72□□□□□ -0.05
RDH16-201ENST00000360752 ABCC8Q09428 1581 aa14.71□□□□□ -0.05
RDH16-201ENST00000360752 HNRNPUL2Q1KMD3 747 aaKnown RBP14.71□□□□□ -0.06
RDH16-201ENST00000360752 CCDC88BA6NC98 1476 aa14.66□□□□□ -0.06
RDH16-201ENST00000360752 SOGA1O94964 1423 aa14.64□□□□□ -0.07
RDH16-201ENST00000360752 CEP162Q5TB80 1403 aa14.63□□□□□ -0.07
RDH16-201ENST00000360752 PABPN1Q86U42 306 aaKnown RBP eCLIP14.58□□□□□ -0.08
RDH16-201ENST00000360752 NACADO15069 1562 aa14.58□□□□□ -0.08
RDH16-201ENST00000360752 CSRNP3Q8WYN3 585 aa14.57□□□□□ -0.08
RDH16-201ENST00000360752 RUSC2Q8N2Y8 1516 aa14.56□□□□□ -0.08
RDH16-201ENST00000360752 ZNF316A6NFI3 1004 aaPredicted RBP14.55□□□□□ -0.08
RDH16-201ENST00000360752 BAZ1AQ9NRL2 1556 aaPredicted RBP14.53□□□□□ -0.08
RDH16-201ENST00000360752 MIER1Q8N108 512 aa14.5□□□□□ -0.09
RDH16-201ENST00000360752 APLP2Q06481 763 aa14.49□□□□□ -0.09
RDH16-201ENST00000360752 BCL11AQ9H165 835 aa14.47□□□□□ -0.09
RDH16-201ENST00000360752 TNIKQ9UKE5 1360 aa14.45□□□□□ -0.1
RDH16-201ENST00000360752 WRNQ14191 1432 aaPredicted RBP eCLIP14.41□□□□□ -0.1
RDH16-201ENST00000360752 EIF4G1Q04637 1599 aaKnown RBP14.41□□□□□ -0.1
RDH16-201ENST00000360752 TOP2AP11388 1531 aaKnown RBP14.4□□□□□ -0.1
RDH16-201ENST00000360752 SMARCA2P51531 1590 aa14.38□□□□□ -0.11
RDH16-201ENST00000360752 GOLGA3Q08378 1498 aa14.36□□□□□ -0.11
RDH16-201ENST00000360752 SMARCA4P51532 1647 aa14.35□□□□□ -0.11
RDH16-201ENST00000360752 ITGAEP38570 1179 aa14.35□□□□□ -0.11
RDH16-201ENST00000360752 CLIP1P30622 1438 aa14.33□□□□□ -0.12
RDH16-201ENST00000360752 EEA1Q15075 1411 aa14.26□□□□□ -0.13
RDH16-201ENST00000360752 CEP164Q9UPV0 1460 aa14.22□□□□□ -0.13
RDH16-201ENST00000360752 RAPGEF2Q9Y4G8 1499 aa14.21□□□□□ -0.13
RDH16-201ENST00000360752 ANP32EQ9BTT0 268 aa14.2□□□□□ -0.14
RDH16-201ENST00000360752 SYNJ1O43426 1573 aa14.18□□□□□ -0.14
RDH16-201ENST00000360752 VPS8Q8N3P4 1428 aa14.18□□□□□ -0.14
RDH16-201ENST00000360752 KANK4Q5T7N3 995 aaPredicted RBP14.17□□□□□ -0.14
RDH16-201ENST00000360752 BCANQ96GW7 911 aa14.14□□□□□ -0.15
RDH16-201ENST00000360752 UNC13AQ9UPW8 1703 aa14.13□□□□□ -0.15
RDH16-201ENST00000360752 ATP1B4Q9UN42 357 aaPredicted RBP14.12□□□□□ -0.15
RDH16-201ENST00000360752 KCNH8Q96L42 1107 aa14.09□□□□□ -0.15
RDH16-201ENST00000360752 TSHZ2Q9NRE2 1034 aa14.08□□□□□ -0.16
RDH16-201ENST00000360752 SUPT16HQ9Y5B9 1047 aaKnown RBP14.07□□□□□ -0.16
RDH16-201ENST00000360752 PRKCSHP14314 528 aaPredicted RBP14.07□□□□□ -0.16
RDH16-201ENST00000360752 BAZ1BQ9UIG0 1483 aaKnown RBP14.07□□□□□ -0.16
RDH16-201ENST00000360752 DHX57Q6P158 1386 aaKnown RBP14.06□□□□□ -0.16
RDH16-201ENST00000360752 KIF21BO75037 1637 aa14.06□□□□□ -0.16
RDH16-201ENST00000360752 HIRIP3Q9BW71 556 aaPredicted RBP14.05□□□□□ -0.16
RDH16-201ENST00000360752 P3H3Q8IVL6 736 aa14.01□□□□□ -0.17
RDH16-201ENST00000360752 ATAD2BQ9ULI0 1458 aa14□□□□□ -0.17
RDH16-201ENST00000360752 FAM50AQ14320 339 aaKnown RBP14□□□□□ -0.17
RDH16-201ENST00000360752 DDX10Q13206 875 aaKnown RBP13.98□□□□□ -0.17
RDH16-201ENST00000360752 BICRAQ9NZM4 1560 aa13.98□□□□□ -0.17
RDH16-201ENST00000360752 SIN3AQ96ST3 1273 aa13.95□□□□□ -0.18
RDH16-201ENST00000360752 ARAP1Q96P48 1450 aa13.94□□□□□ -0.18
RDH16-201ENST00000360752 CCNB3Q8WWL7 1395 aa13.92□□□□□ -0.18
RDH16-201ENST00000360752 FKBP8Q14318 412 aa13.91□□□□□ -0.18
RDH16-201ENST00000360752 TRIM52Q96A61 297 aa13.91□□□□□ -0.18
RDH16-201ENST00000360752 CLSPNQ9HAW4 1339 aa13.88□□□□□ -0.19
RDH16-201ENST00000360752 RAB3GAP2Q9H2M9 1393 aa13.88□□□□□ -0.19
RDH16-201ENST00000360752 TOP2BQ02880 1626 aa13.84□□□□□ -0.19
RDH16-201ENST00000360752 KIF27Q86VH2 1401 aa13.84□□□□□ -0.19
RDH16-201ENST00000360752 PRXQ9BXM0 1461 aa13.83□□□□□ -0.2
RDH16-201ENST00000360752 PEG3Q9GZU2 1588 aa13.83□□□□□ -0.2
RDH16-201ENST00000360752 NEFLP07196 543 aa13.81□□□□□ -0.2
RDH16-201ENST00000360752 ARHGAP35Q9NRY4 1499 aa13.79□□□□□ -0.2
RDH16-201ENST00000360752 RRBP1Q9P2E9 1410 aaKnown RBP13.79□□□□□ -0.2
RDH16-201ENST00000360752 CUX1P39880 1505 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms