RNA–Protein interactions for RNA: ENST00000356906.7

NBR2-201, neighbor of BRCA1 lncRNA 2, humanhuman

TSL 1 (best)

Gene NBR2, Length 978 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR2-201ENST00000356906 AEBP2Q6ZN18 517 aaPredicted RBP27.45■■□□□ 1.98
NBR2-201ENST00000356906 CHIC1Q5VXU3 224 aa25.86■■□□□ 1.73
NBR2-201ENST00000356906 SENP3Q9H4L4 574 aaPredicted RBP23.5■■□□□ 1.35
NBR2-201ENST00000356906 PHF23Q9BUL5 403 aaPredicted RBP23.12■■□□□ 1.29
NBR2-201ENST00000356906 FOXD1Q16676 465 aa21.9■■□□□ 1.1
NBR2-201ENST00000356906 MSH5O43196 834 aa20.65■□□□□ 0.9
NBR2-201ENST00000356906 POTEDQ86YR6 584 aa20.56■□□□□ 0.88
NBR2-201ENST00000356906 PLPPR3Q6T4P5 718 aa20.54■□□□□ 0.88
NBR2-201ENST00000356906 PIAS4Q8N2W9 510 aaPredicted RBP20.4■□□□□ 0.86
NBR2-201ENST00000356906 PPP6R1Q9UPN7 881 aa20.25■□□□□ 0.83
NBR2-201ENST00000356906 ADRA2BP18089 450 aa20.15■□□□□ 0.82
NBR2-201ENST00000356906 DMRT2Q9Y5R5 561 aa18.6■□□□□ 0.57
NBR2-201ENST00000356906 MAPK8IP2Q13387 824 aaPredicted RBP18.57■□□□□ 0.56
NBR2-201ENST00000356906 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
NBR2-201ENST00000356906 PPP4R3CPQ6ZMV5 832 aa17.94■□□□□ 0.46
NBR2-201ENST00000356906 HOXD11P31277 338 aaPredicted RBP17.83■□□□□ 0.44
NBR2-201ENST00000356906 CACNB1Q02641 598 aaPredicted RBP17.81■□□□□ 0.44
NBR2-201ENST00000356906 DCAF8L1A6NGE4 600 aa17.74■□□□□ 0.43
NBR2-201ENST00000356906 CNKSR2Q8WXI2 1034 aa17.7■□□□□ 0.42
NBR2-201ENST00000356906 RNF216Q9NWF9 866 aaPredicted RBP17.61■□□□□ 0.41
NBR2-201ENST00000356906 RNF39Q9H2S5 420 aa17.57■□□□□ 0.4
NBR2-201ENST00000356906 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
NBR2-201ENST00000356906 C1QBPQ07021 282 aaKnown RBP17.32■□□□□ 0.36
NBR2-201ENST00000356906 NCBP3Q53F19 620 aaKnown RBP17.18■□□□□ 0.34
NBR2-201ENST00000356906 NISCHQ9Y2I1 1504 aa17.13■□□□□ 0.33
NBR2-201ENST00000356906 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
NBR2-201ENST00000356906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.91■□□□□ 0.31e-7■□□□□ 10
NBR2-201ENST00000356906 U3KPZ7 1027 aaPredicted RBP16.57■□□□□ 0.24
NBR2-201ENST00000356906 SPINK5Q9NQ38 1064 aaPredicted RBP16.37■□□□□ 0.21
NBR2-201ENST00000356906 DSG3P32926 999 aa16.36■□□□□ 0.21
NBR2-201ENST00000356906 KCNA4P22459 653 aa16.35■□□□□ 0.21
NBR2-201ENST00000356906 CAPN15O75808 1086 aa16.34■□□□□ 0.21
NBR2-201ENST00000356906 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
NBR2-201ENST00000356906 APLP2Q06481 763 aa16.12■□□□□ 0.17
NBR2-201ENST00000356906 POTEHQ6S545 545 aa16.06■□□□□ 0.16
NBR2-201ENST00000356906 ZNF219Q9P2Y4 722 aaPredicted RBP16.05■□□□□ 0.16
NBR2-201ENST00000356906 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
NBR2-201ENST00000356906 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
NBR2-201ENST00000356906 TRHP20396 242 aaPredicted RBP16.01■□□□□ 0.15
NBR2-201ENST00000356906 ABCB7O75027 752 aa15.93■□□□□ 0.14
NBR2-201ENST00000356906 SAMD1Q6SPF0 538 aaPredicted RBP15.92■□□□□ 0.14
NBR2-201ENST00000356906 MYCNP04198 464 aaPredicted RBP15.7■□□□□ 0.1
NBR2-201ENST00000356906 RBM42Q9BTD8 480 aaKnown RBP15.65■□□□□ 0.1
NBR2-201ENST00000356906 POLA2Q14181 598 aa15.53■□□□□ 0.08
NBR2-201ENST00000356906 SLC4A1APQ9BWU0 796 aaKnown RBP15.38■□□□□ 0.05
NBR2-201ENST00000356906 FOXD4L1Q9NU39 408 aa15.38■□□□□ 0.05
NBR2-201ENST00000356906 CHRDL2Q6WN34 429 aa15.37■□□□□ 0.05
NBR2-201ENST00000356906 ATF5Q9Y2D1 282 aaPredicted RBP15.29■□□□□ 0.04
NBR2-201ENST00000356906 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
NBR2-201ENST00000356906 AKT1S1Q96B36 256 aa15.22■□□□□ 0.03
NBR2-201ENST00000356906 CCDC180Q9P1Z9 1646 aa15.18■□□□□ 0.02
NBR2-201ENST00000356906 OSCARQ8IYS5 282 aa15.06■□□□□ 0
NBR2-201ENST00000356906 REM2Q8IYK8 340 aaPredicted RBP15.04■□□□□ -0
NBR2-201ENST00000356906 ZBTB22O15209 634 aa15.03■□□□□ -0
NBR2-201ENST00000356906 ATXN8OSP0DMR3 200 aa14.97□□□□□ -0.01
NBR2-201ENST00000356906 PIP4P2Q8N4L2 257 aa14.94□□□□□ -0.02
NBR2-201ENST00000356906 SP7Q8TDD2 431 aaPredicted RBP14.94□□□□□ -0.02
NBR2-201ENST00000356906 PITPNM1O00562 1244 aa14.89□□□□□ -0.03
NBR2-201ENST00000356906 FXR2P51116 673 aaKnown RBP eCLIP14.84□□□□□ -0.03
NBR2-201ENST00000356906 SPDYE2BA6NHP3 402 aa14.77□□□□□ -0.05
NBR2-201ENST00000356906 SPDYE6P0CI01 402 aa14.77□□□□□ -0.05
NBR2-201ENST00000356906 SPDYE2Q495Y8 402 aa14.77□□□□□ -0.05
NBR2-201ENST00000356906 FBLN2P98095 1184 aa14.75□□□□□ -0.05
NBR2-201ENST00000356906 ABCC9O60706 1549 aa14.71□□□□□ -0.05
NBR2-201ENST00000356906 HAX1O00165 279 aa14.7□□□□□ -0.06
NBR2-201ENST00000356906 MKRN4PQ13434 485 aaPredicted RBP14.6□□□□□ -0.07
NBR2-201ENST00000356906 SPDYE1Q8NFV5 336 aaPredicted RBP14.56□□□□□ -0.08
NBR2-201ENST00000356906 SSUH2Q9Y2M2 353 aa14.55□□□□□ -0.08
NBR2-201ENST00000356906 EVX2Q03828 476 aa14.51□□□□□ -0.09
NBR2-201ENST00000356906 PRKAR2AP13861 404 aaKnown RBP14.49□□□□□ -0.09
NBR2-201ENST00000356906 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
NBR2-201ENST00000356906 CLEC11AQ9Y240 323 aa14.49□□□□□ -0.09
NBR2-201ENST00000356906 C19orf67A6NJJ6 358 aa14.37□□□□□ -0.11
NBR2-201ENST00000356906 ZCCHC6Q5VYS8 1495 aaKnown RBP14.3□□□□□ -0.12
NBR2-201ENST00000356906 DCAF8L2P0C7V8 631 aa14.29□□□□□ -0.12
NBR2-201ENST00000356906 PABPN1Q86U42 306 aaKnown RBP eCLIP14.27□□□□□ -0.13
NBR2-201ENST00000356906 CHADLQ6NUI6 762 aa14.24□□□□□ -0.13
NBR2-201ENST00000356906 PRR29P0C7W0 189 aa14.23□□□□□ -0.13
NBR2-201ENST00000356906 NACADO15069 1562 aa14.2□□□□□ -0.14
NBR2-201ENST00000356906 RB1CC1Q8TDY2 1594 aa14.2□□□□□ -0.14
NBR2-201ENST00000356906 GABBR2O75899 941 aa14.19□□□□□ -0.14
NBR2-201ENST00000356906 DCAF1Q9Y4B6 1507 aa14.14□□□□□ -0.15
NBR2-201ENST00000356906 MYO15BQ96JP2 1530 aa14.12□□□□□ -0.15
NBR2-201ENST00000356906 CSRNP3Q8WYN3 585 aa14.1□□□□□ -0.15
NBR2-201ENST00000356906 FARP1Q9Y4F1 1045 aaPredicted RBP14.04□□□□□ -0.16
NBR2-201ENST00000356906 CD44P16070 742 aaKnown RBP14.02□□□□□ -0.17
NBR2-201ENST00000356906 LHX8Q68G74 356 aa13.99□□□□□ -0.17
NBR2-201ENST00000356906 UNC13AQ9UPW8 1703 aa13.98□□□□□ -0.17
NBR2-201ENST00000356906 CLCN6P51797 869 aa13.97□□□□□ -0.17
NBR2-201ENST00000356906 SCRIBQ14160 1630 aa13.9□□□□□ -0.18
NBR2-201ENST00000356906 POTEIP0CG38 1075 aa13.9□□□□□ -0.18
NBR2-201ENST00000356906 STAG3Q9UJ98 1225 aa13.87□□□□□ -0.19
NBR2-201ENST00000356906 ZNF579Q8NAF0 562 aaKnown RBP13.84□□□□□ -0.19
NBR2-201ENST00000356906 CREBZFQ9NS37 354 aa13.84□□□□□ -0.19
NBR2-201ENST00000356906 BICRAQ9NZM4 1560 aa13.79□□□□□ -0.2
NBR2-201ENST00000356906 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
NBR2-201ENST00000356906 ZRANB1Q9UGI0 708 aa13.77□□□□□ -0.21
NBR2-201ENST00000356906 DCBLD2Q96PD2 775 aa13.74□□□□□ -0.21
NBR2-201ENST00000356906 EHMT2Q96KQ7 1210 aa13.7□□□□□ -0.22
NBR2-201ENST00000356906 SHROOM4Q9ULL8 1493 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms