RNA–Protein interactions for RNA: ENST00000355731.8

RPL23A-201, Transcript of ribosomal protein L23a, humanhuman

TSL 5

Gene RPL23A, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23A-201ENST00000355731 AEBP2Q6ZN18 517 aaPredicted RBP32.59■■■□□ 2.81
RPL23A-201ENST00000355731 CHIC1Q5VXU3 224 aa31.25■■■□□ 2.59
RPL23A-201ENST00000355731 SENP3Q9H4L4 574 aaPredicted RBP27.86■■■□□ 2.05
RPL23A-201ENST00000355731 PHF23Q9BUL5 403 aaPredicted RBP27.51■■□□□ 1.99
RPL23A-201ENST00000355731 FOXD1Q16676 465 aa25.88■■□□□ 1.73
RPL23A-201ENST00000355731 PLPPR3Q6T4P5 718 aa25.13■■□□□ 1.61
RPL23A-201ENST00000355731 PPP6R1Q9UPN7 881 aa24.37■■□□□ 1.49
RPL23A-201ENST00000355731 ADRA2BP18089 450 aa24.34■■□□□ 1.49
RPL23A-201ENST00000355731 PIAS4Q8N2W9 510 aaPredicted RBP24.29■■□□□ 1.48
RPL23A-201ENST00000355731 MSH5O43196 834 aa24.18■■□□□ 1.46
RPL23A-201ENST00000355731 POTEDQ86YR6 584 aa23.1■■□□□ 1.29
RPL23A-201ENST00000355731 SCAF1Q9H7N4 1312 aaKnown RBP22.36■■□□□ 1.17
RPL23A-201ENST00000355731 MAPK8IP2Q13387 824 aaPredicted RBP22.26■■□□□ 1.15
RPL23A-201ENST00000355731 DMRT2Q9Y5R5 561 aa22.1■■□□□ 1.13
RPL23A-201ENST00000355731 PPP4R3CPQ6ZMV5 832 aa22.04■■□□□ 1.12
RPL23A-201ENST00000355731 CNKSR2Q8WXI2 1034 aa21.58■■□□□ 1.05
RPL23A-201ENST00000355731 HOXD11P31277 338 aaPredicted RBP21.38■■□□□ 1.01
RPL23A-201ENST00000355731 NCBP3Q53F19 620 aaKnown RBP21.34■■□□□ 1.01
RPL23A-201ENST00000355731 RNF216Q9NWF9 866 aaPredicted RBP21.32■■□□□ 1
RPL23A-201ENST00000355731 DCAF8L1A6NGE4 600 aa21.25■□□□□ 0.99
RPL23A-201ENST00000355731 NPM3O75607 178 aaKnown RBP20.95■□□□□ 0.94
RPL23A-201ENST00000355731 KCNA4P22459 653 aa20.78■□□□□ 0.92
RPL23A-201ENST00000355731 RNF39Q9H2S5 420 aa20.61■□□□□ 0.89
RPL23A-201ENST00000355731 DNAJC5BQ9UF47 199 aa20.61■□□□□ 0.89
RPL23A-201ENST00000355731 CACNB1Q02641 598 aaPredicted RBP20.6■□□□□ 0.89
RPL23A-201ENST00000355731 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.44■□□□□ 0.867e-8■■□□□ 13.2
RPL23A-201ENST00000355731 C1QBPQ07021 282 aaKnown RBP20.37■□□□□ 0.85
RPL23A-201ENST00000355731 U3KPZ7 1027 aaPredicted RBP19.96■□□□□ 0.79
RPL23A-201ENST00000355731 SLC4A2P04920 1241 aa19.91■□□□□ 0.78
RPL23A-201ENST00000355731 SLC4A1APQ9BWU0 796 aaKnown RBP19.71■□□□□ 0.75
RPL23A-201ENST00000355731 CAPN15O75808 1086 aa19.62■□□□□ 0.73
RPL23A-201ENST00000355731 SPINK5Q9NQ38 1064 aaPredicted RBP19.6■□□□□ 0.73
RPL23A-201ENST00000355731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.59■□□□□ 0.73
RPL23A-201ENST00000355731 HNRNPUL2Q1KMD3 747 aaKnown RBP19.59■□□□□ 0.73
RPL23A-201ENST00000355731 APLP2Q06481 763 aa19.56■□□□□ 0.72
RPL23A-201ENST00000355731 SAMD1Q6SPF0 538 aaPredicted RBP19.47■□□□□ 0.71
RPL23A-201ENST00000355731 MYCNP04198 464 aaPredicted RBP19.41■□□□□ 0.7
RPL23A-201ENST00000355731 DSG3P32926 999 aa19.39■□□□□ 0.69
RPL23A-201ENST00000355731 TRHP20396 242 aaPredicted RBP19.36■□□□□ 0.69
RPL23A-201ENST00000355731 ZNF219Q9P2Y4 722 aaPredicted RBP19.35■□□□□ 0.69
RPL23A-201ENST00000355731 FOXD4L1Q9NU39 408 aa19.34■□□□□ 0.69
RPL23A-201ENST00000355731 ABCB7O75027 752 aa19.15■□□□□ 0.66
RPL23A-201ENST00000355731 ZBTB22O15209 634 aa19.05■□□□□ 0.64
RPL23A-201ENST00000355731 POLA2Q14181 598 aa18.88■□□□□ 0.61
RPL23A-201ENST00000355731 ATF5Q9Y2D1 282 aaPredicted RBP18.87■□□□□ 0.61
RPL23A-201ENST00000355731 ATXN8OSP0DMR3 200 aa18.73■□□□□ 0.59
RPL23A-201ENST00000355731 ZBTB12Q9Y330 459 aaPredicted RBP18.58■□□□□ 0.56
RPL23A-201ENST00000355731 RBM42Q9BTD8 480 aaKnown RBP18.57■□□□□ 0.56
RPL23A-201ENST00000355731 CSRNP3Q8WYN3 585 aa18.45■□□□□ 0.54
RPL23A-201ENST00000355731 EHMT2Q96KQ7 1210 aa18.4■□□□□ 0.54
RPL23A-201ENST00000355731 OSCARQ8IYS5 282 aa18.26■□□□□ 0.51
RPL23A-201ENST00000355731 FBLN2P98095 1184 aa18.24■□□□□ 0.51
RPL23A-201ENST00000355731 POTEHQ6S545 545 aa18.18■□□□□ 0.5
RPL23A-201ENST00000355731 AKT1S1Q96B36 256 aa18.17■□□□□ 0.5
RPL23A-201ENST00000355731 MKRN4PQ13434 485 aaPredicted RBP18.02■□□□□ 0.48
RPL23A-201ENST00000355731 CHRDL2Q6WN34 429 aa18.02■□□□□ 0.48
RPL23A-201ENST00000355731 SPDYE2BA6NHP3 402 aa17.99■□□□□ 0.47
RPL23A-201ENST00000355731 SPDYE6P0CI01 402 aa17.99■□□□□ 0.47
RPL23A-201ENST00000355731 SPDYE2Q495Y8 402 aa17.99■□□□□ 0.47
RPL23A-201ENST00000355731 REM2Q8IYK8 340 aaPredicted RBP17.98■□□□□ 0.47
RPL23A-201ENST00000355731 ZNF692Q9BU19 519 aaPredicted RBP17.83■□□□□ 0.44
RPL23A-201ENST00000355731 PITPNM1O00562 1244 aa17.76■□□□□ 0.43
RPL23A-201ENST00000355731 SSUH2Q9Y2M2 353 aa17.74■□□□□ 0.43
RPL23A-201ENST00000355731 SPDYE1Q8NFV5 336 aaPredicted RBP17.63■□□□□ 0.41
RPL23A-201ENST00000355731 PIP4P2Q8N4L2 257 aa17.62■□□□□ 0.41
RPL23A-201ENST00000355731 CLEC11AQ9Y240 323 aa17.59■□□□□ 0.41
RPL23A-201ENST00000355731 FXR2P51116 673 aaKnown RBP eCLIP17.56■□□□□ 0.4
RPL23A-201ENST00000355731 PABPN1Q86U42 306 aaKnown RBP eCLIP17.56■□□□□ 0.4
RPL23A-201ENST00000355731 SPDYE4A6NLX3 237 aa17.37■□□□□ 0.37
RPL23A-201ENST00000355731 PRR29P0C7W0 189 aa17.34■□□□□ 0.37
RPL23A-201ENST00000355731 PRKAR2AP13861 404 aaKnown RBP17.34■□□□□ 0.37
RPL23A-201ENST00000355731 HAX1O00165 279 aa17.29■□□□□ 0.36
RPL23A-201ENST00000355731 CHADLQ6NUI6 762 aa17.17■□□□□ 0.34
RPL23A-201ENST00000355731 SP7Q8TDD2 431 aaPredicted RBP17.17■□□□□ 0.34
RPL23A-201ENST00000355731 STAG3Q9UJ98 1225 aa17.17■□□□□ 0.34
RPL23A-201ENST00000355731 EVX2Q03828 476 aa17■□□□□ 0.31
RPL23A-201ENST00000355731 C19orf67A6NJJ6 358 aa16.98■□□□□ 0.31
RPL23A-201ENST00000355731 FARP1Q9Y4F1 1045 aaPredicted RBP16.97■□□□□ 0.31
RPL23A-201ENST00000355731 PROM2Q8N271 834 aa16.93■□□□□ 0.3
RPL23A-201ENST00000355731 CREBZFQ9NS37 354 aa16.91■□□□□ 0.3
RPL23A-201ENST00000355731 CD44P16070 742 aaKnown RBP16.81■□□□□ 0.28
RPL23A-201ENST00000355731 FKBP8Q14318 412 aa16.76■□□□□ 0.27
RPL23A-201ENST00000355731 NPM1P06748 294 aaKnown RBP eCLIP16.69■□□□□ 0.26
RPL23A-201ENST00000355731 GABBR2O75899 941 aa16.68■□□□□ 0.26
RPL23A-201ENST00000355731 MNX1P50219 401 aaPredicted RBP16.62■□□□□ 0.25
RPL23A-201ENST00000355731 ZRANB1Q9UGI0 708 aa16.62■□□□□ 0.25
RPL23A-201ENST00000355731 PAK3O75914 559 aaPredicted RBP16.6■□□□□ 0.25
RPL23A-201ENST00000355731 PLEKHG5O94827 1062 aa16.6■□□□□ 0.25
RPL23A-201ENST00000355731 CLCN6P51797 869 aa16.58■□□□□ 0.24
RPL23A-201ENST00000355731 MIER1Q8N108 512 aa16.57■□□□□ 0.24
RPL23A-201ENST00000355731 ZNF579Q8NAF0 562 aaKnown RBP16.55■□□□□ 0.24
RPL23A-201ENST00000355731 PLCD3Q8N3E9 789 aa16.48■□□□□ 0.23
RPL23A-201ENST00000355731 FBXO3Q9UK99 471 aa16.4■□□□□ 0.22
RPL23A-201ENST00000355731 PHF12Q96QT6 1004 aa16.37■□□□□ 0.21
RPL23A-201ENST00000355731 TSPYL2Q9H2G4 693 aaPredicted RBP16.36■□□□□ 0.21
RPL23A-201ENST00000355731 ZBTB47Q9UFB7 747 aaPredicted RBP16.36■□□□□ 0.21
RPL23A-201ENST00000355731 DCBLD2Q96PD2 775 aa16.35■□□□□ 0.21
RPL23A-201ENST00000355731 GALR2O43603 387 aaPredicted RBP16.31■□□□□ 0.2
RPL23A-201ENST00000355731 POTEIP0CG38 1075 aa16.28■□□□□ 0.2
RPL23A-201ENST00000355731 RASEFQ8IZ41 740 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms