RNA–Protein interactions for RNA: ENST00000355182.8

SPART-201, Transcript of spartin, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SPART, Length 4,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPART-201ENST00000355182 NISCHQ9Y2I1 1504 aa9.3□□□□□ -0.92
SPART-201ENST00000355182 DCAF8L2P0C7V8 631 aa9.13□□□□□ -0.95
SPART-201ENST00000355182 SHROOM4Q9ULL8 1493 aa8.41□□□□□ -1.06
SPART-201ENST00000355182 SUPT5HO00267 1087 aaKnown RBP8.38□□□□□ -1.07
SPART-201ENST00000355182 ABCC9O60706 1549 aa8.13□□□□□ -1.11
SPART-201ENST00000355182 FAM9AQ8IZU1 332 aaPredicted RBP8.04□□□□□ -1.12
SPART-201ENST00000355182 EHMT2Q96KQ7 1210 aa7.94□□□□□ -1.14
SPART-201ENST00000355182 PABPN1Q86U42 306 aaKnown RBP eCLIP7.93□□□□□ -1.14
SPART-201ENST00000355182 APLP2Q06481 763 aa7.9□□□□□ -1.14
SPART-201ENST00000355182 CCDC180Q9P1Z9 1646 aa7.86□□□□□ -1.15
SPART-201ENST00000355182 TRIM41Q8WV44 630 aa7.85□□□□□ -1.15
SPART-201ENST00000355182 RANGAP1P46060 587 aaPredicted RBP7.75□□□□□ -1.17
SPART-201ENST00000355182 UBTFP17480 764 aaKnown RBP7.73□□□□□ -1.17
SPART-201ENST00000355182 ATP1B4Q9UN42 357 aaPredicted RBP7.73□□□□□ -1.17
SPART-201ENST00000355182 RB1CC1Q8TDY2 1594 aa7.7□□□□□ -1.18
SPART-201ENST00000355182 ZCCHC6Q5VYS8 1495 aaKnown RBP7.68□□□□□ -1.18
SPART-201ENST00000355182 SCRIBQ14160 1630 aa7.67□□□□□ -1.18
SPART-201ENST00000355182 NACADO15069 1562 aa7.62□□□□□ -1.19
SPART-201ENST00000355182 TTBK1Q5TCY1 1321 aaPredicted RBP7.61□□□□□ -1.19
SPART-201ENST00000355182 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.59□□□□□ -1.19
SPART-201ENST00000355182 HNRNPUL2Q1KMD3 747 aaKnown RBP7.59□□□□□ -1.19
SPART-201ENST00000355182 MYT1LQ9UL68 1186 aa7.53□□□□□ -1.2
SPART-201ENST00000355182 FBLN2P98095 1184 aa7.53□□□□□ -1.2
SPART-201ENST00000355182 CHIC1Q5VXU3 224 aa7.48□□□□□ -1.21
SPART-201ENST00000355182 DCAF1Q9Y4B6 1507 aa7.45□□□□□ -1.22
SPART-201ENST00000355182 PCGF6Q9BYE7 350 aa7.41□□□□□ -1.22
SPART-201ENST00000355182 BAZ1BQ9UIG0 1483 aaKnown RBP7.38□□□□□ -1.23
SPART-201ENST00000355182 CCER1Q8TC90 406 aaPredicted RBP7.37□□□□□ -1.23
SPART-201ENST00000355182 LOC105371045A0A1W2PR82 267 aa7.36□□□□□ -1.23
SPART-201ENST00000355182 PPARGC1BQ86YN6 1023 aaKnown RBP7.36□□□□□ -1.23
SPART-201ENST00000355182 ITGAEP38570 1179 aa7.35□□□□□ -1.23
SPART-201ENST00000355182 MYO15BQ96JP2 1530 aa7.34□□□□□ -1.23
SPART-201ENST00000355182 ERCC6Q03468 1493 aa7.34□□□□□ -1.23
SPART-201ENST00000355182 NPM1P06748 294 aaKnown RBP eCLIP7.34□□□□□ -1.24
SPART-201ENST00000355182 CSRNP3Q8WYN3 585 aa7.34□□□□□ -1.24
SPART-201ENST00000355182 BAZ1AQ9NRL2 1556 aaPredicted RBP7.33□□□□□ -1.24
SPART-201ENST00000355182 CHMP7Q8WUX9 453 aaPredicted RBP7.31□□□□□ -1.24
SPART-201ENST00000355182 ZEB1P37275 1124 aaPredicted RBP7.31□□□□□ -1.24
SPART-201ENST00000355182 RSF1Q96T23 1441 aaPredicted RBP7.31□□□□□ -1.24
SPART-201ENST00000355182 CDK11AQ9UQ88 783 aaPredicted RBP7.29□□□□□ -1.24
SPART-201ENST00000355182 P3H3Q8IVL6 736 aa7.28□□□□□ -1.24
SPART-201ENST00000355182 FAM50AQ14320 339 aaKnown RBP7.27□□□□□ -1.25
SPART-201ENST00000355182 TRIM26Q12899 539 aaPredicted RBP7.26□□□□□ -1.25
SPART-201ENST00000355182 SMARCA2P51531 1590 aa7.25□□□□□ -1.25
SPART-201ENST00000355182 CECR2Q9BXF3 1484 aa7.24□□□□□ -1.25
SPART-201ENST00000355182 ARID3CA6NKF2 412 aa7.24□□□□□ -1.25
SPART-201ENST00000355182 PDS5BQ9NTI5 1447 aa7.21□□□□□ -1.25
SPART-201ENST00000355182 TRIM52Q96A61 297 aa7.21□□□□□ -1.26
SPART-201ENST00000355182 ESF1Q9H501 851 aaKnown RBP7.2□□□□□ -1.26
SPART-201ENST00000355182 WRNQ14191 1432 aaPredicted RBP eCLIP7.19□□□□□ -1.26
SPART-201ENST00000355182 ZNF777Q9ULD5 760 aaPredicted RBP7.19□□□□□ -1.26
SPART-201ENST00000355182 MROH2BQ7Z745 1585 aa7.16□□□□□ -1.26
SPART-201ENST00000355182 KIF27Q86VH2 1401 aa7.15□□□□□ -1.26
SPART-201ENST00000355182 PELP1Q8IZL8 1130 aaKnown RBP7.15□□□□□ -1.26
SPART-201ENST00000355182 POLR3GLQ9BT43 218 aa7.14□□□□□ -1.27
SPART-201ENST00000355182 EEA1Q15075 1411 aa7.14□□□□□ -1.27
SPART-201ENST00000355182 CADPSQ9ULU8 1353 aa7.12□□□□□ -1.27
SPART-201ENST00000355182 ATAD2BQ9ULI0 1458 aa7.12□□□□□ -1.27
SPART-201ENST00000355182 BCANQ96GW7 911 aa7.12□□□□□ -1.27
SPART-201ENST00000355182 SLC4A1APQ9BWU0 796 aaKnown RBP7.11□□□□□ -1.27
SPART-201ENST00000355182 CCDC88BA6NC98 1476 aa7.1□□□□□ -1.27
SPART-201ENST00000355182 PLEKHD1A6NEE1 506 aa7.1□□□□□ -1.27
SPART-201ENST00000355182 KCNH8Q96L42 1107 aa7.08□□□□□ -1.28
SPART-201ENST00000355182 SMARCA4P51532 1647 aa7.08□□□□□ -1.28
SPART-201ENST00000355182 TOP2AP11388 1531 aaKnown RBP7.08□□□□□ -1.28
SPART-201ENST00000355182 TSPY4P0CV99 314 aa7.08□□□□□ -1.28
SPART-201ENST00000355182 TSPY10P0CW01 314 aa7.08□□□□□ -1.28
SPART-201ENST00000355182 MTUS2Q5JR59 1369 aa7.08□□□□□ -1.28
SPART-201ENST00000355182 STAG3Q9UJ98 1225 aa7.07□□□□□ -1.28
SPART-201ENST00000355182 CUX2O14529 1486 aa7.07□□□□□ -1.28
SPART-201ENST00000355182 SOGA1O94964 1423 aa7.07□□□□□ -1.28
SPART-201ENST00000355182 PLPPR3Q6T4P5 718 aa7.06□□□□□ -1.28
SPART-201ENST00000355182 CEP164Q9UPV0 1460 aa7.06□□□□□ -1.28
SPART-201ENST00000355182 GOLGA3Q08378 1498 aa7.06□□□□□ -1.28
SPART-201ENST00000355182 TRHP20396 242 aaPredicted RBP7.05□□□□□ -1.28
SPART-201ENST00000355182 NEUROD1Q13562 356 aa7.05□□□□□ -1.28
SPART-201ENST00000355182 CLIP1P30622 1438 aa7.05□□□□□ -1.28
SPART-201ENST00000355182 EIF4G1Q04637 1599 aaKnown RBP7.04□□□□□ -1.28
SPART-201ENST00000355182 WIZO95785 1651 aa7.04□□□□□ -1.28
SPART-201ENST00000355182 ZNF326Q5BKZ1 582 aaKnown RBP7.04□□□□□ -1.28
SPART-201ENST00000355182 CARMIL1Q5VZK9 1371 aa7.04□□□□□ -1.28
SPART-201ENST00000355182 CENPBP07199 599 aaPredicted RBP7.02□□□□□ -1.29
SPART-201ENST00000355182 TDRD9Q8NDG6 1382 aaKnown RBP7.02□□□□□ -1.29
SPART-201ENST00000355182 CHGAP10645 457 aaKnown RBP7.02□□□□□ -1.29
SPART-201ENST00000355182 ABCC8Q09428 1581 aa7.02□□□□□ -1.29
SPART-201ENST00000355182 NCAPD3P42695 1498 aa7.02□□□□□ -1.29
SPART-201ENST00000355182 CARMIL2Q6F5E8 1435 aa7.01□□□□□ -1.29
SPART-201ENST00000355182 FANCD2Q9BXW9 1451 aa7.01□□□□□ -1.29
SPART-201ENST00000355182 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7□□□□□ -1.292e-7■■■■□ 23.8
SPART-201ENST00000355182 ARID4BQ4LE39 1312 aaPredicted RBP7□□□□□ -1.29
SPART-201ENST00000355182 CNGB1Q14028 1251 aaPredicted RBP6.99□□□□□ -1.29
SPART-201ENST00000355182 CHIC2Q9UKJ5 165 aa6.99□□□□□ -1.29
SPART-201ENST00000355182 CFDP1Q9UEE9 299 aaPredicted RBP6.98□□□□□ -1.29
SPART-201ENST00000355182 OSCARQ8IYS5 282 aa6.97□□□□□ -1.29
SPART-201ENST00000355182 NEFLP07196 543 aa6.97□□□□□ -1.29
SPART-201ENST00000355182 TNIKQ9UKE5 1360 aa6.96□□□□□ -1.29
SPART-201ENST00000355182 CC2D2AQ9P2K1 1620 aa6.96□□□□□ -1.3
SPART-201ENST00000355182 FHAD1B1AJZ9 1412 aa6.95□□□□□ -1.3
SPART-201ENST00000355182 CEP162Q5TB80 1403 aa6.95□□□□□ -1.3
SPART-201ENST00000355182 ACIN1Q9UKV3 1341 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms