RNA–Protein interactions for RNA: ENST00000353247.9

CASP1-201, Transcript of caspase 1, humanhuman

TSL 1 (best) BASIC

Gene CASP1, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1-201ENST00000353247 AEBP2Q6ZN18 517 aaPredicted RBP20.64■□□□□ 0.89
CASP1-201ENST00000353247 CHIC1Q5VXU3 224 aa19.53■□□□□ 0.72
CASP1-201ENST00000353247 SENP3Q9H4L4 574 aaPredicted RBP18■□□□□ 0.47
CASP1-201ENST00000353247 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
CASP1-201ENST00000353247 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
CASP1-201ENST00000353247 FOXD1Q16676 465 aa16.67■□□□□ 0.26
CASP1-201ENST00000353247 MSH5O43196 834 aa16.15■□□□□ 0.18
CASP1-201ENST00000353247 PIAS4Q8N2W9 510 aaPredicted RBP15.47■□□□□ 0.07
CASP1-201ENST00000353247 PLPPR3Q6T4P5 718 aa14.86□□□□□ -0.03
CASP1-201ENST00000353247 PPP6R1Q9UPN7 881 aa14.86□□□□□ -0.03
CASP1-201ENST00000353247 ADRA2BP18089 450 aa14.78□□□□□ -0.04
CASP1-201ENST00000353247 CACNB1Q02641 598 aaPredicted RBP14.23□□□□□ -0.13
CASP1-201ENST00000353247 DMRT2Q9Y5R5 561 aa14.09□□□□□ -0.15
CASP1-201ENST00000353247 SCAF1Q9H7N4 1312 aaKnown RBP13.82□□□□□ -0.2
CASP1-201ENST00000353247 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
CASP1-201ENST00000353247 RNF39Q9H2S5 420 aa13.61□□□□□ -0.23
CASP1-201ENST00000353247 DCAF8L1A6NGE4 600 aa13.45□□□□□ -0.26
CASP1-201ENST00000353247 C1QBPQ07021 282 aaKnown RBP13.45□□□□□ -0.26
CASP1-201ENST00000353247 HOXD11P31277 338 aaPredicted RBP13.24□□□□□ -0.29
CASP1-201ENST00000353247 POTEHQ6S545 545 aa13.19□□□□□ -0.3
CASP1-201ENST00000353247 DNAJC5BQ9UF47 199 aa13.14□□□□□ -0.31
CASP1-201ENST00000353247 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
CASP1-201ENST00000353247 CNKSR2Q8WXI2 1034 aa12.85□□□□□ -0.35
CASP1-201ENST00000353247 PPP4R3CPQ6ZMV5 832 aa12.79□□□□□ -0.36
CASP1-201ENST00000353247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.6□□□□□ -0.39
CASP1-201ENST00000353247 DSG3P32926 999 aa12.41□□□□□ -0.42
CASP1-201ENST00000353247 CAPN15O75808 1086 aa12.29□□□□□ -0.44
CASP1-201ENST00000353247 NCBP3Q53F19 620 aaKnown RBP12.22□□□□□ -0.45
CASP1-201ENST00000353247 SPINK5Q9NQ38 1064 aaPredicted RBP12.18□□□□□ -0.46
CASP1-201ENST00000353247 U3KPZ7 1027 aaPredicted RBP12.18□□□□□ -0.46
CASP1-201ENST00000353247 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
CASP1-201ENST00000353247 APLP2Q06481 763 aa12.06□□□□□ -0.48
CASP1-201ENST00000353247 SP7Q8TDD2 431 aaPredicted RBP12.01□□□□□ -0.49
CASP1-201ENST00000353247 ZNF219Q9P2Y4 722 aaPredicted RBP12□□□□□ -0.49
CASP1-201ENST00000353247 CHRDL2Q6WN34 429 aa11.99□□□□□ -0.49
CASP1-201ENST00000353247 NPM3O75607 178 aaKnown RBP11.87□□□□□ -0.51
CASP1-201ENST00000353247 ABCB7O75027 752 aa11.86□□□□□ -0.51
CASP1-201ENST00000353247 TRHP20396 242 aaPredicted RBP11.86□□□□□ -0.51
CASP1-201ENST00000353247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.8□□□□□ -0.52
CASP1-201ENST00000353247 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
CASP1-201ENST00000353247 SAMD1Q6SPF0 538 aaPredicted RBP11.64□□□□□ -0.55
CASP1-201ENST00000353247 AKT1S1Q96B36 256 aa11.53□□□□□ -0.56
CASP1-201ENST00000353247 SLC4A2P04920 1241 aa11.5□□□□□ -0.57
CASP1-201ENST00000353247 HAX1O00165 279 aa11.49□□□□□ -0.57
CASP1-201ENST00000353247 PIP4P2Q8N4L2 257 aa11.47□□□□□ -0.57
CASP1-201ENST00000353247 POLA2Q14181 598 aa11.37□□□□□ -0.59
CASP1-201ENST00000353247 ZBTB12Q9Y330 459 aaPredicted RBP11.34□□□□□ -0.59
CASP1-201ENST00000353247 REM2Q8IYK8 340 aaPredicted RBP11.32□□□□□ -0.6
CASP1-201ENST00000353247 FXR2P51116 673 aaKnown RBP eCLIP11.31□□□□□ -0.6
CASP1-201ENST00000353247 PITPNM1O00562 1244 aa11.21□□□□□ -0.61
CASP1-201ENST00000353247 LHX8Q68G74 356 aa11.2□□□□□ -0.62
CASP1-201ENST00000353247 MYCNP04198 464 aaPredicted RBP11.13□□□□□ -0.63
CASP1-201ENST00000353247 PLSCR2Q9NRY7 297 aa11.13□□□□□ -0.63
CASP1-201ENST00000353247 EVX2Q03828 476 aa11.11□□□□□ -0.63
CASP1-201ENST00000353247 OSCARQ8IYS5 282 aa11.06□□□□□ -0.64
CASP1-201ENST00000353247 C19orf67A6NJJ6 358 aa10.97□□□□□ -0.65
CASP1-201ENST00000353247 GABBR2O75899 941 aa10.96□□□□□ -0.65
CASP1-201ENST00000353247 PRKAR2AP13861 404 aaKnown RBP10.91□□□□□ -0.66
CASP1-201ENST00000353247 KCNA4P22459 653 aa10.85□□□□□ -0.67
CASP1-201ENST00000353247 SPDYE1Q8NFV5 336 aaPredicted RBP10.82□□□□□ -0.68
CASP1-201ENST00000353247 SPDYE2BA6NHP3 402 aa10.81□□□□□ -0.68
CASP1-201ENST00000353247 SPDYE6P0CI01 402 aa10.81□□□□□ -0.68
CASP1-201ENST00000353247 SPDYE2Q495Y8 402 aa10.81□□□□□ -0.68
CASP1-201ENST00000353247 CLCN6P51797 869 aa10.8□□□□□ -0.68
CASP1-201ENST00000353247 CLEC11AQ9Y240 323 aa10.69□□□□□ -0.7
CASP1-201ENST00000353247 ATF5Q9Y2D1 282 aaPredicted RBP10.68□□□□□ -0.7
CASP1-201ENST00000353247 PCDH10Q9P2E7 1040 aa10.66□□□□□ -0.7
CASP1-201ENST00000353247 POTEIP0CG38 1075 aa10.64□□□□□ -0.71
CASP1-201ENST00000353247 POTEMA6NI47 508 aa10.6□□□□□ -0.71
CASP1-201ENST00000353247 FBLN2P98095 1184 aa10.6□□□□□ -0.71
CASP1-201ENST00000353247 DCBLD2Q96PD2 775 aa10.59□□□□□ -0.71
CASP1-201ENST00000353247 CD44P16070 742 aaKnown RBP10.54□□□□□ -0.72
CASP1-201ENST00000353247 POTEGQ6S5H5 508 aa10.53□□□□□ -0.72
CASP1-201ENST00000353247 FOXD4L1Q9NU39 408 aa10.53□□□□□ -0.72
CASP1-201ENST00000353247 SSUH2Q9Y2M2 353 aa10.52□□□□□ -0.73
CASP1-201ENST00000353247 CHADLQ6NUI6 762 aa10.49□□□□□ -0.73
CASP1-201ENST00000353247 PRR29P0C7W0 189 aa10.47□□□□□ -0.73
CASP1-201ENST00000353247 OTUD5Q96G74 571 aa10.47□□□□□ -0.73
CASP1-201ENST00000353247 ZNF692Q9BU19 519 aaPredicted RBP10.45□□□□□ -0.74
CASP1-201ENST00000353247 ZNF579Q8NAF0 562 aaKnown RBP10.4□□□□□ -0.74
CASP1-201ENST00000353247 ATXN8OSP0DMR3 200 aa10.39□□□□□ -0.75
CASP1-201ENST00000353247 FARP1Q9Y4F1 1045 aaPredicted RBP10.39□□□□□ -0.75
CASP1-201ENST00000353247 MAMSTRQ6ZN01 415 aa10.25□□□□□ -0.77
CASP1-201ENST00000353247 POTEB2H3BUK9 544 aa10.24□□□□□ -0.77
CASP1-201ENST00000353247 PABPN1Q86U42 306 aaKnown RBP eCLIP10.24□□□□□ -0.77
CASP1-201ENST00000353247 ZRANB1Q9UGI0 708 aa10.23□□□□□ -0.77
CASP1-201ENST00000353247 MKRN4PQ13434 485 aaPredicted RBP10.21□□□□□ -0.77
CASP1-201ENST00000353247 GALR2O43603 387 aaPredicted RBP10.19□□□□□ -0.78
CASP1-201ENST00000353247 SLC4A1APQ9BWU0 796 aaKnown RBP10.17□□□□□ -0.78
CASP1-201ENST00000353247 PAK3O75914 559 aaPredicted RBP10.14□□□□□ -0.79
CASP1-201ENST00000353247 C7P10643 843 aa10.1□□□□□ -0.79
CASP1-201ENST00000353247 LCE2DQ5TA82 110 aaPredicted RBP10.1□□□□□ -0.79
CASP1-201ENST00000353247 SLC39A7Q92504 469 aa10.1□□□□□ -0.79
CASP1-201ENST00000353247 SCUBE2Q9NQ36 999 aa10.1□□□□□ -0.79
CASP1-201ENST00000353247 METRNQ9UJH8 293 aa10.1□□□□□ -0.79
CASP1-201ENST00000353247 ASTLQ6HA08 431 aaPredicted RBP10.04□□□□□ -0.8
CASP1-201ENST00000353247 FAM163AQ96GL9 167 aaPredicted RBP10.04□□□□□ -0.8
CASP1-201ENST00000353247 PELP1Q8IZL8 1130 aaKnown RBP10□□□□□ -0.81
CASP1-201ENST00000353247 CDAN1Q8IWY9 1227 aa9.97□□□□□ -0.81
CASP1-201ENST00000353247 POTEJP0CG39 1038 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 234.3 ms