RNA–Protein interactions for RNA: ENST00000350092.8

PTBP1-202, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-202ENST00000350092 NISCHQ9Y2I1 1504 aa32.37■■■□□ 2.77
PTBP1-202ENST00000350092 SHROOM4Q9ULL8 1493 aa27.58■■■□□ 2.01
PTBP1-202ENST00000350092 ZCCHC6Q5VYS8 1495 aaKnown RBP27.52■■■□□ 2
PTBP1-202ENST00000350092 CCDC180Q9P1Z9 1646 aa27.52■■■□□ 2
PTBP1-202ENST00000350092 SUPT5HO00267 1087 aaKnown RBP27.14■■□□□ 1.93
PTBP1-202ENST00000350092 MYO15BQ96JP2 1530 aa26.96■■□□□ 1.91
PTBP1-202ENST00000350092 CHIC1Q5VXU3 224 aa26.75■■□□□ 1.87
PTBP1-202ENST00000350092 DCAF1Q9Y4B6 1507 aa26.67■■□□□ 1.86
PTBP1-202ENST00000350092 HRCP23327 699 aa26.6■■□□□ 1.85
PTBP1-202ENST00000350092 DCAF8L2P0C7V8 631 aa26.2■■□□□ 1.78
PTBP1-202ENST00000350092 PCGF6Q9BYE7 350 aa26.18■■□□□ 1.78
PTBP1-202ENST00000350092 ABCC9O60706 1549 aa26.11■■□□□ 1.77
PTBP1-202ENST00000350092 PPARGC1BQ86YN6 1023 aaKnown RBP25.91■■□□□ 1.74
PTBP1-202ENST00000350092 LOC105371045A0A1W2PR82 267 aa25.88■■□□□ 1.73
PTBP1-202ENST00000350092 RSF1Q96T23 1441 aaPredicted RBP25.71■■□□□ 1.71
PTBP1-202ENST00000350092 TRIM26Q12899 539 aaPredicted RBP25.68■■□□□ 1.7
PTBP1-202ENST00000350092 SCRIBQ14160 1630 aa25.67■■□□□ 1.7
PTBP1-202ENST00000350092 RB1CC1Q8TDY2 1594 aa25.6■■□□□ 1.69
PTBP1-202ENST00000350092 TRIM41Q8WV44 630 aa25.28■■□□□ 1.64
PTBP1-202ENST00000350092 ZEB1P37275 1124 aaPredicted RBP25.27■■□□□ 1.64
PTBP1-202ENST00000350092 NACADO15069 1562 aa25.2■■□□□ 1.63
PTBP1-202ENST00000350092 MROH2BQ7Z745 1585 aa25.17■■□□□ 1.62
PTBP1-202ENST00000350092 CECR2Q9BXF3 1484 aa25.16■■□□□ 1.62
PTBP1-202ENST00000350092 EIF4G1Q04637 1599 aaKnown RBP25.15■■□□□ 1.62
PTBP1-202ENST00000350092 WIZO95785 1651 aa25.12■■□□□ 1.61
PTBP1-202ENST00000350092 BAZ1AQ9NRL2 1556 aaPredicted RBP25.06■■□□□ 1.6
PTBP1-202ENST00000350092 FAM9AQ8IZU1 332 aaPredicted RBP25.02■■□□□ 1.6
PTBP1-202ENST00000350092 SCAF1Q9H7N4 1312 aaKnown RBP24.76■■□□□ 1.55
PTBP1-202ENST00000350092 TOP2AP11388 1531 aaKnown RBP24.73■■□□□ 1.55
PTBP1-202ENST00000350092 EHMT2Q96KQ7 1210 aa24.72■■□□□ 1.55
PTBP1-202ENST00000350092 WRNQ14191 1432 aaPredicted RBP eCLIP24.66■■□□□ 1.543e-6■■■□□ 18.3
PTBP1-202ENST00000350092 PELP1Q8IZL8 1130 aaKnown RBP24.65■■□□□ 1.54
PTBP1-202ENST00000350092 SMARCA4P51532 1647 aa24.64■■□□□ 1.53
PTBP1-202ENST00000350092 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
PTBP1-202ENST00000350092 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
PTBP1-202ENST00000350092 UNC13AQ9UPW8 1703 aa24.58■■□□□ 1.53
PTBP1-202ENST00000350092 CCDC88BA6NC98 1476 aa24.57■■□□□ 1.52
PTBP1-202ENST00000350092 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.51■■□□□ 1.51
PTBP1-202ENST00000350092 CEP162Q5TB80 1403 aa24.47■■□□□ 1.51
PTBP1-202ENST00000350092 CCER1Q8TC90 406 aaPredicted RBP24.42■■□□□ 1.5
PTBP1-202ENST00000350092 TNIKQ9UKE5 1360 aa24.41■■□□□ 1.5
PTBP1-202ENST00000350092 SOGA1O94964 1423 aa24.39■■□□□ 1.5
PTBP1-202ENST00000350092 EEA1Q15075 1411 aa24.37■■□□□ 1.49
PTBP1-202ENST00000350092 ACIN1Q9UKV3 1341 aaKnown RBP24.36■■□□□ 1.49
PTBP1-202ENST00000350092 RUSC2Q8N2Y8 1516 aa24.29■■□□□ 1.48
PTBP1-202ENST00000350092 NEUROD1Q13562 356 aa24.28■■□□□ 1.48
PTBP1-202ENST00000350092 DIEXFQ68CQ4 756 aaKnown RBP24.22■■□□□ 1.47
PTBP1-202ENST00000350092 GOLGA3Q08378 1498 aa24.22■■□□□ 1.47
PTBP1-202ENST00000350092 PEG3Q9GZU2 1588 aa24.21■■□□□ 1.47
PTBP1-202ENST00000350092 KIF21BO75037 1637 aa24.18■■□□□ 1.46
PTBP1-202ENST00000350092 CSRNP3Q8WYN3 585 aa24.16■■□□□ 1.46
PTBP1-202ENST00000350092 BICRAQ9NZM4 1560 aa24.12■■□□□ 1.45
PTBP1-202ENST00000350092 SYNJ1O43426 1573 aa24.11■■□□□ 1.45
PTBP1-202ENST00000350092 TTBK1Q5TCY1 1321 aaPredicted RBP24.06■■□□□ 1.44
PTBP1-202ENST00000350092 CENPBP07199 599 aaPredicted RBP24.04■■□□□ 1.44
PTBP1-202ENST00000350092 CEP164Q9UPV0 1460 aa24.04■■□□□ 1.44
PTBP1-202ENST00000350092 GTF3C3Q9Y5Q9 886 aa24.02■■□□□ 1.44
PTBP1-202ENST00000350092 ZNF316A6NFI3 1004 aaPredicted RBP23.99■■□□□ 1.43
PTBP1-202ENST00000350092 UBTFP17480 764 aaKnown RBP23.97■■□□□ 1.43
PTBP1-202ENST00000350092 BAZ1BQ9UIG0 1483 aaKnown RBP23.95■■□□□ 1.42
PTBP1-202ENST00000350092 VPS8Q8N3P4 1428 aa23.9■■□□□ 1.42
PTBP1-202ENST00000350092 CLIP1P30622 1438 aa23.89■■□□□ 1.41
PTBP1-202ENST00000350092 RAPGEF2Q9Y4G8 1499 aa23.81■■□□□ 1.4
PTBP1-202ENST00000350092 ATAD2BQ9ULI0 1458 aa23.8■■□□□ 1.4
PTBP1-202ENST00000350092 TOP2BQ02880 1626 aa23.79■■□□□ 1.4
PTBP1-202ENST00000350092 BIVM-ERCC5R4GMW8 1640 aa23.78■■□□□ 1.4
PTBP1-202ENST00000350092 HNRNPUL2Q1KMD3 747 aaKnown RBP23.69■■□□□ 1.38
PTBP1-202ENST00000350092 PABPN1Q86U42 306 aaKnown RBP eCLIP23.69■■□□□ 1.382e-11■□□□□ 9.4
PTBP1-202ENST00000350092 MIER1Q8N108 512 aa23.69■■□□□ 1.38
PTBP1-202ENST00000350092 ERICH3Q5RHP9 1530 aa23.68■■□□□ 1.38
PTBP1-202ENST00000350092 ARAP1Q96P48 1450 aa23.61■■□□□ 1.37
PTBP1-202ENST00000350092 PRXQ9BXM0 1461 aa23.59■■□□□ 1.37
PTBP1-202ENST00000350092 YTHDC1Q96MU7 727 aaKnown RBP23.57■■□□□ 1.36
PTBP1-202ENST00000350092 CLSPNQ9HAW4 1339 aa23.54■■□□□ 1.36
PTBP1-202ENST00000350092 DHX57Q6P158 1386 aaKnown RBP23.53■■□□□ 1.36
PTBP1-202ENST00000350092 MYT1Q01538 1121 aa23.48■■□□□ 1.35
PTBP1-202ENST00000350092 CUX2O14529 1486 aa23.48■■□□□ 1.35
PTBP1-202ENST00000350092 APLP2Q06481 763 aa23.47■■□□□ 1.35
PTBP1-202ENST00000350092 RRBP1Q9P2E9 1410 aaKnown RBP23.46■■□□□ 1.35
PTBP1-202ENST00000350092 CUX1P39880 1505 aa23.43■■□□□ 1.34
PTBP1-202ENST00000350092 HMGXB3Q12766 1538 aa23.4■■□□□ 1.34
PTBP1-202ENST00000350092 KANK4Q5T7N3 995 aaPredicted RBP23.34■■□□□ 1.33
PTBP1-202ENST00000350092 PRDM2Q13029 1718 aa23.33■■□□□ 1.32
PTBP1-202ENST00000350092 RANGAP1P46060 587 aaPredicted RBP23.3■■□□□ 1.32
PTBP1-202ENST00000350092 ARHGAP35Q9NRY4 1499 aa23.3■■□□□ 1.32
PTBP1-202ENST00000350092 NCAPD3P42695 1498 aa23.27■■□□□ 1.32
PTBP1-202ENST00000350092 KIF27Q86VH2 1401 aa23.26■■□□□ 1.31
PTBP1-202ENST00000350092 MAPKBP1O60336 1514 aa23.21■■□□□ 1.31
PTBP1-202ENST00000350092 CFTRP13569 1480 aa23.21■■□□□ 1.31
PTBP1-202ENST00000350092 CCNB3Q8WWL7 1395 aa23.21■■□□□ 1.31
PTBP1-202ENST00000350092 MAP3K1Q13233 1512 aa23.2■■□□□ 1.3
PTBP1-202ENST00000350092 TIAM1Q13009 1591 aa23.18■■□□□ 1.3
PTBP1-202ENST00000350092 SUPT16HQ9Y5B9 1047 aaKnown RBP23.12■■□□□ 1.29
PTBP1-202ENST00000350092 CFAP43Q8NDM7 1665 aa23.11■■□□□ 1.29
PTBP1-202ENST00000350092 RAB3GAP2Q9H2M9 1393 aa23.06■■□□□ 1.28
PTBP1-202ENST00000350092 LRRC9Q6ZRR7 1453 aa23.01■■□□□ 1.27
PTBP1-202ENST00000350092 IGF1RP08069 1367 aa23■■□□□ 1.27
PTBP1-202ENST00000350092 WDR97A6NE52 1622 aa22.96■■□□□ 1.27
PTBP1-202ENST00000350092 PCF11O94913 1555 aaKnown RBP22.96■■□□□ 1.27
PTBP1-202ENST00000350092 SETD5Q9C0A6 1442 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms