RNA–Protein interactions for RNA: ENST00000348459.9

HELLS-202, Transcript of helicase, lymphoid specific, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HELLS, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HELLS-202ENST00000348459 NISCHQ9Y2I1 1504 aa30.54■■■□□ 2.48
HELLS-202ENST00000348459 CCDC180Q9P1Z9 1646 aa26.19■■□□□ 1.78
HELLS-202ENST00000348459 ZCCHC6Q5VYS8 1495 aaKnown RBP25.81■■□□□ 1.72
HELLS-202ENST00000348459 SHROOM4Q9ULL8 1493 aa25.63■■□□□ 1.69
HELLS-202ENST00000348459 DCAF1Q9Y4B6 1507 aa25.14■■□□□ 1.62
HELLS-202ENST00000348459 DCAF8L2P0C7V8 631 aa25.07■■□□□ 1.6
HELLS-202ENST00000348459 SUPT5HO00267 1087 aaKnown RBP24.97■■□□□ 1.59
HELLS-202ENST00000348459 MYO15BQ96JP2 1530 aa24.52■■□□□ 1.52
HELLS-202ENST00000348459 SCRIBQ14160 1630 aa24.37■■□□□ 1.49
HELLS-202ENST00000348459 ABCC9O60706 1549 aa24.33■■□□□ 1.49
HELLS-202ENST00000348459 CHIC1Q5VXU3 224 aa24.26■■□□□ 1.47
HELLS-202ENST00000348459 NACADO15069 1562 aa24.2■■□□□ 1.47
HELLS-202ENST00000348459 RSF1Q96T23 1441 aaPredicted RBP24.03■■□□□ 1.44
HELLS-202ENST00000348459 RB1CC1Q8TDY2 1594 aa23.84■■□□□ 1.41
HELLS-202ENST00000348459 CECR2Q9BXF3 1484 aa23.78■■□□□ 1.4
HELLS-202ENST00000348459 MROH2BQ7Z745 1585 aa23.7■■□□□ 1.39
HELLS-202ENST00000348459 WIZO95785 1651 aa23.58■■□□□ 1.37
HELLS-202ENST00000348459 UNC13AQ9UPW8 1703 aa23.57■■□□□ 1.36
HELLS-202ENST00000348459 BAZ1AQ9NRL2 1556 aaPredicted RBP23.47■■□□□ 1.35
HELLS-202ENST00000348459 LOC105371045A0A1W2PR82 267 aa23.46■■□□□ 1.35
HELLS-202ENST00000348459 SMARCA4P51532 1647 aa23.34■■□□□ 1.33
HELLS-202ENST00000348459 TRIM41Q8WV44 630 aa23.32■■□□□ 1.32
HELLS-202ENST00000348459 EIF4G1Q04637 1599 aaKnown RBP23.26■■□□□ 1.31
HELLS-202ENST00000348459 BICRAQ9NZM4 1560 aa23.25■■□□□ 1.31
HELLS-202ENST00000348459 TOP2AP11388 1531 aaKnown RBP23.24■■□□□ 1.31
HELLS-202ENST00000348459 PCGF6Q9BYE7 350 aa23.14■■□□□ 1.3
HELLS-202ENST00000348459 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
HELLS-202ENST00000348459 PABPN1Q86U42 306 aaKnown RBP eCLIP23.08■■□□□ 1.29
HELLS-202ENST00000348459 CCDC88BA6NC98 1476 aa23.07■■□□□ 1.28
HELLS-202ENST00000348459 FAM9AQ8IZU1 332 aaPredicted RBP23.05■■□□□ 1.28
HELLS-202ENST00000348459 HRCP23327 699 aa23.05■■□□□ 1.28
HELLS-202ENST00000348459 PEG3Q9GZU2 1588 aa22.96■■□□□ 1.27
HELLS-202ENST00000348459 ABCC8Q09428 1581 aa22.92■■□□□ 1.26
HELLS-202ENST00000348459 TRIM26Q12899 539 aaPredicted RBP22.84■■□□□ 1.25
HELLS-202ENST00000348459 EHMT2Q96KQ7 1210 aa22.8■■□□□ 1.24
HELLS-202ENST00000348459 ATAD2BQ9ULI0 1458 aa22.75■■□□□ 1.23
HELLS-202ENST00000348459 BAZ1BQ9UIG0 1483 aaKnown RBP22.65■■□□□ 1.22
HELLS-202ENST00000348459 SOGA1O94964 1423 aa22.62■■□□□ 1.21
HELLS-202ENST00000348459 PPARGC1BQ86YN6 1023 aaKnown RBP22.56■■□□□ 1.2
HELLS-202ENST00000348459 WRNQ14191 1432 aaPredicted RBP eCLIP22.55■■□□□ 1.2
HELLS-202ENST00000348459 RUSC2Q8N2Y8 1516 aa22.54■■□□□ 1.2
HELLS-202ENST00000348459 SYNJ1O43426 1573 aa22.52■■□□□ 1.19
HELLS-202ENST00000348459 EEA1Q15075 1411 aa22.51■■□□□ 1.19
HELLS-202ENST00000348459 CSRNP3Q8WYN3 585 aa22.42■■□□□ 1.18
HELLS-202ENST00000348459 HMGXB3Q12766 1538 aa22.4■■□□□ 1.18
HELLS-202ENST00000348459 CEP162Q5TB80 1403 aa22.4■■□□□ 1.18
HELLS-202ENST00000348459 TNIKQ9UKE5 1360 aa22.4■■□□□ 1.18
HELLS-202ENST00000348459 NCAPD3P42695 1498 aa22.37■■□□□ 1.17
HELLS-202ENST00000348459 GOLGA3Q08378 1498 aa22.33■■□□□ 1.16
HELLS-202ENST00000348459 TOP2BQ02880 1626 aa22.29■■□□□ 1.16
HELLS-202ENST00000348459 KIF21BO75037 1637 aa22.28■■□□□ 1.16
HELLS-202ENST00000348459 BIVM-ERCC5R4GMW8 1640 aa22.25■■□□□ 1.15
HELLS-202ENST00000348459 CEP164Q9UPV0 1460 aa22.23■■□□□ 1.15
HELLS-202ENST00000348459 UBTFP17480 764 aaKnown RBP22.22■■□□□ 1.15
HELLS-202ENST00000348459 ZEB1P37275 1124 aaPredicted RBP22.2■■□□□ 1.14
HELLS-202ENST00000348459 CFTRP13569 1480 aa22.12■■□□□ 1.13
HELLS-202ENST00000348459 RAPGEF2Q9Y4G8 1499 aa22.1■■□□□ 1.13
HELLS-202ENST00000348459 CUX1P39880 1505 aa22.1■■□□□ 1.13
HELLS-202ENST00000348459 PRDM2Q13029 1718 aa22.05■■□□□ 1.12
HELLS-202ENST00000348459 CLIP1P30622 1438 aa22.02■■□□□ 1.12
HELLS-202ENST00000348459 TTBK1Q5TCY1 1321 aaPredicted RBP22.01■■□□□ 1.11
HELLS-202ENST00000348459 PRXQ9BXM0 1461 aa21.96■■□□□ 1.11
HELLS-202ENST00000348459 ERICH3Q5RHP9 1530 aa21.96■■□□□ 1.11
HELLS-202ENST00000348459 CC2D2AQ9P2K1 1620 aa21.94■■□□□ 1.1
HELLS-202ENST00000348459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.93■■□□□ 1.1
HELLS-202ENST00000348459 VPS8Q8N3P4 1428 aa21.93■■□□□ 1.1
HELLS-202ENST00000348459 CADPSQ9ULU8 1353 aa21.87■■□□□ 1.09
HELLS-202ENST00000348459 KIF27Q86VH2 1401 aa21.86■■□□□ 1.09
HELLS-202ENST00000348459 CCER1Q8TC90 406 aaPredicted RBP21.83■■□□□ 1.09
HELLS-202ENST00000348459 ARAP1Q96P48 1450 aa21.78■■□□□ 1.08
HELLS-202ENST00000348459 RANGAP1P46060 587 aaPredicted RBP21.77■■□□□ 1.08
HELLS-202ENST00000348459 FGD5Q6ZNL6 1462 aa21.71■■□□□ 1.07
HELLS-202ENST00000348459 CUX2O14529 1486 aa21.71■■□□□ 1.07
HELLS-202ENST00000348459 FANCD2Q9BXW9 1451 aa21.67■■□□□ 1.06
HELLS-202ENST00000348459 IGF1RP08069 1367 aa21.66■■□□□ 1.06
HELLS-202ENST00000348459 APLP2Q06481 763 aa21.64■■□□□ 1.05
HELLS-202ENST00000348459 ARHGAP35Q9NRY4 1499 aa21.62■■□□□ 1.05
HELLS-202ENST00000348459 NESP48681 1621 aa21.59■■□□□ 1.05
HELLS-202ENST00000348459 DNMBPQ6XZF7 1577 aa21.59■■□□□ 1.05
HELLS-202ENST00000348459 HNRNPUL2Q1KMD3 747 aaKnown RBP21.57■■□□□ 1.04
HELLS-202ENST00000348459 CARMIL1Q5VZK9 1371 aa21.53■■□□□ 1.04
HELLS-202ENST00000348459 TOPBP1Q92547 1522 aa21.53■■□□□ 1.04
HELLS-202ENST00000348459 KANK4Q5T7N3 995 aaPredicted RBP21.52■■□□□ 1.03
HELLS-202ENST00000348459 POLA1P09884 1462 aaPredicted RBP21.5■■□□□ 1.03
HELLS-202ENST00000348459 RAD54L2Q9Y4B4 1467 aa21.49■■□□□ 1.03
HELLS-202ENST00000348459 ABCA10Q8WWZ4 1543 aa21.49■■□□□ 1.03
HELLS-202ENST00000348459 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
HELLS-202ENST00000348459 WDR97A6NE52 1622 aa21.41■■□□□ 1.02
HELLS-202ENST00000348459 URB2Q14146 1524 aaKnown RBP21.41■■□□□ 1.02
HELLS-202ENST00000348459 RRBP1Q9P2E9 1410 aaKnown RBP21.4■■□□□ 1.02
HELLS-202ENST00000348459 CUL7Q14999 1698 aa21.36■■□□□ 1.01
HELLS-202ENST00000348459 TIAM1Q13009 1591 aa21.35■■□□□ 1.01
HELLS-202ENST00000348459 DNAJC5BQ9UF47 199 aa21.35■■□□□ 1.01
HELLS-202ENST00000348459 MAP3K1Q13233 1512 aa21.34■■□□□ 1.01
HELLS-202ENST00000348459 KIF21AQ7Z4S6 1674 aa21.3■■□□□ 1
HELLS-202ENST00000348459 CTTNBP2Q8WZ74 1663 aa21.29■■□□□ 1
HELLS-202ENST00000348459 ABCA5Q8WWZ7 1642 aa21.29■■□□□ 1
HELLS-202ENST00000348459 PCF11O94913 1555 aaKnown RBP21.28■■□□□ 1
HELLS-202ENST00000348459 DIEXFQ68CQ4 756 aaKnown RBP21.28■■□□□ 1
HELLS-202ENST00000348459 CCNB3Q8WWL7 1395 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms