RNA–Protein interactions for RNA: ENST00000347328.9

LARP4-202, Transcript of La ribonucleoprotein domain family member 4, humanhuman

TSL 1 (best) BASIC

Gene LARP4, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-202ENST00000347328 NISCHQ9Y2I1 1504 aa11.59□□□□□ -0.55
LARP4-202ENST00000347328 CCDC180Q9P1Z9 1646 aa11.24□□□□□ -0.61
LARP4-202ENST00000347328 MYO15BQ96JP2 1530 aa10.69□□□□□ -0.7
LARP4-202ENST00000347328 DCAF1Q9Y4B6 1507 aa10.65□□□□□ -0.7
LARP4-202ENST00000347328 ZCCHC6Q5VYS8 1495 aaKnown RBP10.07□□□□□ -0.8
LARP4-202ENST00000347328 SHROOM4Q9ULL8 1493 aa10.05□□□□□ -0.8
LARP4-202ENST00000347328 UNC13AQ9UPW8 1703 aa10.02□□□□□ -0.8
LARP4-202ENST00000347328 NACADO15069 1562 aa9.98□□□□□ -0.81
LARP4-202ENST00000347328 RB1CC1Q8TDY2 1594 aa9.92□□□□□ -0.82
LARP4-202ENST00000347328 AEBP2Q6ZN18 517 aaPredicted RBP9.9□□□□□ -0.82
LARP4-202ENST00000347328 PEG3Q9GZU2 1588 aa9.8□□□□□ -0.84
LARP4-202ENST00000347328 ABCC9O60706 1549 aa9.8□□□□□ -0.84
LARP4-202ENST00000347328 PRDM2Q13029 1718 aa9.76□□□□□ -0.85
LARP4-202ENST00000347328 EIF4G1Q04637 1599 aaKnown RBP9.74□□□□□ -0.85
LARP4-202ENST00000347328 BICRAQ9NZM4 1560 aa9.71□□□□□ -0.85
LARP4-202ENST00000347328 CHIC1Q5VXU3 224 aa9.56□□□□□ -0.88
LARP4-202ENST00000347328 SMARCA2P51531 1590 aa9.4□□□□□ -0.91
LARP4-202ENST00000347328 CC2D2AQ9P2K1 1620 aa9.28□□□□□ -0.92
LARP4-202ENST00000347328 BAZ1AQ9NRL2 1556 aaPredicted RBP9.26□□□□□ -0.93
LARP4-202ENST00000347328 HMGXB3Q12766 1538 aa9.2□□□□□ -0.94
LARP4-202ENST00000347328 WDR97A6NE52 1622 aa9.16□□□□□ -0.94
LARP4-202ENST00000347328 SCRIBQ14160 1630 aa9.16□□□□□ -0.94
LARP4-202ENST00000347328 SMARCA4P51532 1647 aa9.09□□□□□ -0.95
LARP4-202ENST00000347328 DNAJC5BQ9UF47 199 aa9.09□□□□□ -0.96
LARP4-202ENST00000347328 NCAPD3P42695 1498 aa9.07□□□□□ -0.96
LARP4-202ENST00000347328 BIVM-ERCC5R4GMW8 1640 aa9.07□□□□□ -0.96
LARP4-202ENST00000347328 CUX2O14529 1486 aa9.02□□□□□ -0.96
LARP4-202ENST00000347328 CECR2Q9BXF3 1484 aa9.02□□□□□ -0.96
LARP4-202ENST00000347328 THOC2Q8NI27 1593 aaKnown RBP8.99□□□□□ -0.97
LARP4-202ENST00000347328 LAMC3Q9Y6N6 1575 aa8.97□□□□□ -0.97
LARP4-202ENST00000347328 TOP2AP11388 1531 aaKnown RBP8.96□□□□□ -0.98
LARP4-202ENST00000347328 ATAD2BQ9ULI0 1458 aa8.91□□□□□ -0.98
LARP4-202ENST00000347328 WDR62O43379 1518 aa8.83□□□□□ -1
LARP4-202ENST00000347328 KIF21AQ7Z4S6 1674 aa8.82□□□□□ -1
LARP4-202ENST00000347328 PABPN1Q86U42 306 aaKnown RBP eCLIP8.76□□□□□ -1.01
LARP4-202ENST00000347328 PHF23Q9BUL5 403 aaPredicted RBP8.74□□□□□ -1.01
LARP4-202ENST00000347328 BAZ1BQ9UIG0 1483 aaKnown RBP8.73□□□□□ -1.01
LARP4-202ENST00000347328 MROH2BQ7Z745 1585 aa8.71□□□□□ -1.02
LARP4-202ENST00000347328 WIZO95785 1651 aa8.67□□□□□ -1.02
LARP4-202ENST00000347328 TOP2BQ02880 1626 aa8.65□□□□□ -1.02
LARP4-202ENST00000347328 CFTRP13569 1480 aa8.64□□□□□ -1.03
LARP4-202ENST00000347328 MRC2Q9UBG0 1479 aa8.63□□□□□ -1.03
LARP4-202ENST00000347328 KIF21BO75037 1637 aa8.61□□□□□ -1.03
LARP4-202ENST00000347328 ABCA5Q8WWZ7 1642 aa8.61□□□□□ -1.03
LARP4-202ENST00000347328 PDS5BQ9NTI5 1447 aa8.57□□□□□ -1.04
LARP4-202ENST00000347328 RSF1Q96T23 1441 aaPredicted RBP8.56□□□□□ -1.04
LARP4-202ENST00000347328 TARBP1Q13395 1621 aaKnown RBP8.56□□□□□ -1.04
LARP4-202ENST00000347328 ABCC8Q09428 1581 aa8.55□□□□□ -1.04
LARP4-202ENST00000347328 CADPSQ9ULU8 1353 aa8.54□□□□□ -1.04
LARP4-202ENST00000347328 DNMBPQ6XZF7 1577 aa8.52□□□□□ -1.04
LARP4-202ENST00000347328 DNAJC5Q9H3Z4 198 aa8.51□□□□□ -1.05
LARP4-202ENST00000347328 NESP48681 1621 aa8.51□□□□□ -1.05
LARP4-202ENST00000347328 CTTNBP2Q8WZ74 1663 aa8.5□□□□□ -1.05
LARP4-202ENST00000347328 SHROOM2Q13796 1616 aa8.49□□□□□ -1.05
LARP4-202ENST00000347328 CEP164Q9UPV0 1460 aa8.49□□□□□ -1.05
LARP4-202ENST00000347328 URB2Q14146 1524 aaKnown RBP8.47□□□□□ -1.05
LARP4-202ENST00000347328 ERICH3Q5RHP9 1530 aa8.47□□□□□ -1.05
LARP4-202ENST00000347328 PBRM1Q86U86 1689 aa8.47□□□□□ -1.05
LARP4-202ENST00000347328 CUL7Q14999 1698 aa8.47□□□□□ -1.05
LARP4-202ENST00000347328 ERCC6Q03468 1493 aa8.46□□□□□ -1.06
LARP4-202ENST00000347328 IFT140Q96RY7 1462 aa8.44□□□□□ -1.06
LARP4-202ENST00000347328 FANCD2Q9BXW9 1451 aa8.44□□□□□ -1.06
LARP4-202ENST00000347328 LRRIQ1Q96JM4 1722 aa8.44□□□□□ -1.06
LARP4-202ENST00000347328 CLASP1Q7Z460 1538 aa8.44□□□□□ -1.06
LARP4-202ENST00000347328 EIF4G3O43432 1585 aaKnown RBP8.43□□□□□ -1.06
LARP4-202ENST00000347328 CFAP43Q8NDM7 1665 aa8.43□□□□□ -1.06
LARP4-202ENST00000347328 SAMD9Q5K651 1589 aa8.43□□□□□ -1.06
LARP4-202ENST00000347328 BCORL1Q5H9F3 1711 aa8.42□□□□□ -1.06
LARP4-202ENST00000347328 CHD1O14646 1710 aa8.4□□□□□ -1.06
LARP4-202ENST00000347328 ADCY10Q96PN6 1610 aa8.4□□□□□ -1.06
LARP4-202ENST00000347328 MAP3K1Q13233 1512 aa8.38□□□□□ -1.07
LARP4-202ENST00000347328 TOPBP1Q92547 1522 aa8.38□□□□□ -1.07
LARP4-202ENST00000347328 CCDC88BA6NC98 1476 aa8.36□□□□□ -1.07
LARP4-202ENST00000347328 RIMBP3CA6NJZ7 1639 aa8.36□□□□□ -1.07
LARP4-202ENST00000347328 RIMBP3BA6NNM3 1639 aa8.36□□□□□ -1.07
LARP4-202ENST00000347328 RIMBP3Q9UFD9 1639 aa8.36□□□□□ -1.07
LARP4-202ENST00000347328 DCAF8L2P0C7V8 631 aa8.34□□□□□ -1.07
LARP4-202ENST00000347328 SYNJ1O43426 1573 aa8.34□□□□□ -1.07
LARP4-202ENST00000347328 PELP1Q8IZL8 1130 aaKnown RBP8.34□□□□□ -1.07
LARP4-202ENST00000347328 MAGI1Q96QZ7 1491 aaPredicted RBP8.3□□□□□ -1.08
LARP4-202ENST00000347328 MYT1Q01538 1121 aa8.29□□□□□ -1.08
LARP4-202ENST00000347328 ABCA10Q8WWZ4 1543 aa8.27□□□□□ -1.08
LARP4-202ENST00000347328 ADAMTS12P58397 1594 aa8.27□□□□□ -1.09
LARP4-202ENST00000347328 CUX1P39880 1505 aa8.25□□□□□ -1.09
LARP4-202ENST00000347328 ARHGEF11O15085 1522 aa8.25□□□□□ -1.09
LARP4-202ENST00000347328 POLA1P09884 1462 aaPredicted RBP8.25□□□□□ -1.09
LARP4-202ENST00000347328 CROCC2H7BZ55 1655 aa8.24□□□□□ -1.09
LARP4-202ENST00000347328 WRNQ14191 1432 aaPredicted RBP eCLIP8.19□□□□□ -1.1
LARP4-202ENST00000347328 EEA1Q15075 1411 aa8.18□□□□□ -1.1
LARP4-202ENST00000347328 SYNJ2O15056 1496 aa8.17□□□□□ -1.1
LARP4-202ENST00000347328 RUSC2Q8N2Y8 1516 aa8.17□□□□□ -1.1
LARP4-202ENST00000347328 NUP160Q12769 1436 aa8.17□□□□□ -1.1
LARP4-202ENST00000347328 POLR1AO95602 1720 aaPredicted RBP8.17□□□□□ -1.1
LARP4-202ENST00000347328 ZNF608Q9ULD9 1512 aaPredicted RBP8.16□□□□□ -1.1
LARP4-202ENST00000347328 KIF13AQ9H1H9 1805 aa8.16□□□□□ -1.1
LARP4-202ENST00000347328 NEURL4Q96JN8 1562 aa8.15□□□□□ -1.1
LARP4-202ENST00000347328 GRIN2BQ13224 1484 aa8.15□□□□□ -1.1
LARP4-202ENST00000347328 AQRO60306 1485 aaKnown RBP eCLIP8.14□□□□□ -1.111e-8■■■■■ 37.4
LARP4-202ENST00000347328 FGD5Q6ZNL6 1462 aa8.14□□□□□ -1.11
LARP4-202ENST00000347328 PRXQ9BXM0 1461 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms