RNA–Protein interactions for RNA: ENST00000347132.9

KCNQ4-201, Transcript of potassium voltage-gated channel subfamily Q member 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KCNQ4, Length 4,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4-201ENST00000347132 NISCHQ9Y2I1 1504 aa28.19■■■□□ 2.1
KCNQ4-201ENST00000347132 DCAF8L2P0C7V8 631 aa26.75■■□□□ 1.87
KCNQ4-201ENST00000347132 SHROOM4Q9ULL8 1493 aa26.64■■□□□ 1.86
KCNQ4-201ENST00000347132 SUPT5HO00267 1087 aaKnown RBP26.51■■□□□ 1.83
KCNQ4-201ENST00000347132 EHMT2Q96KQ7 1210 aa25.48■■□□□ 1.67
KCNQ4-201ENST00000347132 PCGF6Q9BYE7 350 aa25.14■■□□□ 1.62
KCNQ4-201ENST00000347132 FAM9AQ8IZU1 332 aaPredicted RBP24.89■■□□□ 1.58
KCNQ4-201ENST00000347132 LOC105371045A0A1W2PR82 267 aa24.67■■□□□ 1.54
KCNQ4-201ENST00000347132 PPARGC1BQ86YN6 1023 aaKnown RBP24.61■■□□□ 1.53
KCNQ4-201ENST00000347132 CHIC1Q5VXU3 224 aa24.59■■□□□ 1.53
KCNQ4-201ENST00000347132 TTBK1Q5TCY1 1321 aaPredicted RBP24.56■■□□□ 1.52
KCNQ4-201ENST00000347132 HRCP23327 699 aa24.3■■□□□ 1.48
KCNQ4-201ENST00000347132 TRIM41Q8WV44 630 aa24.16■■□□□ 1.46
KCNQ4-201ENST00000347132 MYO15BQ96JP2 1530 aa23.95■■□□□ 1.42
KCNQ4-201ENST00000347132 RANGAP1P46060 587 aaPredicted RBP23.9■■□□□ 1.42
KCNQ4-201ENST00000347132 TRIM26Q12899 539 aaPredicted RBP23.77■■□□□ 1.4
KCNQ4-201ENST00000347132 CCER1Q8TC90 406 aaPredicted RBP23.66■■□□□ 1.38
KCNQ4-201ENST00000347132 ZCCHC6Q5VYS8 1495 aaKnown RBP23.59■■□□□ 1.37
KCNQ4-201ENST00000347132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.54■■□□□ 1.36
KCNQ4-201ENST00000347132 PELP1Q8IZL8 1130 aaKnown RBP23.47■■□□□ 1.35
KCNQ4-201ENST00000347132 UBTFP17480 764 aaKnown RBP23.45■■□□□ 1.34
KCNQ4-201ENST00000347132 YTHDC1Q96MU7 727 aaKnown RBP23.42■■□□□ 1.34
KCNQ4-201ENST00000347132 ABCC9O60706 1549 aa23.33■■□□□ 1.33
KCNQ4-201ENST00000347132 ZEB1P37275 1124 aaPredicted RBP23.3■■□□□ 1.32
KCNQ4-201ENST00000347132 HNRNPUL2Q1KMD3 747 aaKnown RBP23.17■■□□□ 1.3
KCNQ4-201ENST00000347132 APLP2Q06481 763 aa23.15■■□□□ 1.3
KCNQ4-201ENST00000347132 PABPN1Q86U42 306 aaKnown RBP eCLIP23.11■■□□□ 1.29
KCNQ4-201ENST00000347132 SCRIBQ14160 1630 aa23.09■■□□□ 1.29
KCNQ4-201ENST00000347132 ITGAEP38570 1179 aa22.93■■□□□ 1.26
KCNQ4-201ENST00000347132 CENPBP07199 599 aaPredicted RBP22.92■■□□□ 1.26
KCNQ4-201ENST00000347132 DCAF1Q9Y4B6 1507 aa22.9■■□□□ 1.26
KCNQ4-201ENST00000347132 ATP1B4Q9UN42 357 aaPredicted RBP22.9■■□□□ 1.26
KCNQ4-201ENST00000347132 DIEXFQ68CQ4 756 aaKnown RBP22.87■■□□□ 1.25
KCNQ4-201ENST00000347132 CCDC180Q9P1Z9 1646 aa22.85■■□□□ 1.25
KCNQ4-201ENST00000347132 RSF1Q96T23 1441 aaPredicted RBP22.79■■□□□ 1.24
KCNQ4-201ENST00000347132 SCAF1Q9H7N4 1312 aaKnown RBP22.74■■□□□ 1.23
KCNQ4-201ENST00000347132 GTF3C3Q9Y5Q9 886 aa22.73■■□□□ 1.23
KCNQ4-201ENST00000347132 MYT1Q01538 1121 aa22.7■■□□□ 1.22
KCNQ4-201ENST00000347132 NEUROD1Q13562 356 aa22.61■■□□□ 1.21
KCNQ4-201ENST00000347132 CECR2Q9BXF3 1484 aa22.6■■□□□ 1.21
KCNQ4-201ENST00000347132 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
KCNQ4-201ENST00000347132 CSRNP3Q8WYN3 585 aa22.49■■□□□ 1.19
KCNQ4-201ENST00000347132 ACIN1Q9UKV3 1341 aaKnown RBP22.48■■□□□ 1.19
KCNQ4-201ENST00000347132 ZNF316A6NFI3 1004 aaPredicted RBP22.34■■□□□ 1.17
KCNQ4-201ENST00000347132 CNGB1Q14028 1251 aaPredicted RBP22.31■■□□□ 1.16
KCNQ4-201ENST00000347132 P3H3Q8IVL6 736 aa22.25■■□□□ 1.15
KCNQ4-201ENST00000347132 BCANQ96GW7 911 aa22.25■■□□□ 1.15
KCNQ4-201ENST00000347132 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
KCNQ4-201ENST00000347132 MIER1Q8N108 512 aa22.24■■□□□ 1.15
KCNQ4-201ENST00000347132 SOGA1O94964 1423 aa22.19■■□□□ 1.14
KCNQ4-201ENST00000347132 FAM50AQ14320 339 aaKnown RBP22.16■■□□□ 1.14
KCNQ4-201ENST00000347132 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
KCNQ4-201ENST00000347132 CEP162Q5TB80 1403 aa22.14■■□□□ 1.13
KCNQ4-201ENST00000347132 CCDC88BA6NC98 1476 aa22.07■■□□□ 1.12
KCNQ4-201ENST00000347132 HIRIP3Q9BW71 556 aaPredicted RBP22.06■■□□□ 1.12
KCNQ4-201ENST00000347132 WIZO95785 1651 aa22.05■■□□□ 1.12
KCNQ4-201ENST00000347132 ERICH6Q7L0X2 663 aa22.04■■□□□ 1.12
KCNQ4-201ENST00000347132 ARID3CA6NKF2 412 aa22.01■■□□□ 1.11
KCNQ4-201ENST00000347132 RUSC2Q8N2Y8 1516 aa21.95■■□□□ 1.1
KCNQ4-201ENST00000347132 POLR3GLQ9BT43 218 aa21.95■■□□□ 1.1
KCNQ4-201ENST00000347132 CLIP1P30622 1438 aa21.88■■□□□ 1.09
KCNQ4-201ENST00000347132 NEFLP07196 543 aa21.84■■□□□ 1.09
KCNQ4-201ENST00000347132 DDX10Q13206 875 aaKnown RBP21.82■■□□□ 1.08
KCNQ4-201ENST00000347132 WRNQ14191 1432 aaPredicted RBP eCLIP21.79■■□□□ 1.08
KCNQ4-201ENST00000347132 TNIKQ9UKE5 1360 aa21.77■■□□□ 1.08
KCNQ4-201ENST00000347132 NACADO15069 1562 aa21.73■■□□□ 1.07
KCNQ4-201ENST00000347132 KANK4Q5T7N3 995 aaPredicted RBP21.72■■□□□ 1.07
KCNQ4-201ENST00000347132 TRIM52Q96A61 297 aa21.72■■□□□ 1.07
KCNQ4-201ENST00000347132 GOLGA3Q08378 1498 aa21.69■■□□□ 1.06
KCNQ4-201ENST00000347132 BAZ1AQ9NRL2 1556 aaPredicted RBP21.67■■□□□ 1.06
KCNQ4-201ENST00000347132 SENP3-EIF4A1A0A087X0R7 540 aa21.67■■□□□ 1.06
KCNQ4-201ENST00000347132 SIN3AQ96ST3 1273 aa21.64■■□□□ 1.05
KCNQ4-201ENST00000347132 FKBP8Q14318 412 aa21.62■■□□□ 1.05
KCNQ4-201ENST00000347132 IRX6P78412 446 aaPredicted RBP21.58■■□□□ 1.05
KCNQ4-201ENST00000347132 ZNF326Q5BKZ1 582 aaKnown RBP21.57■■□□□ 1.04
KCNQ4-201ENST00000347132 CHIC2Q9UKJ5 165 aa21.57■■□□□ 1.04
KCNQ4-201ENST00000347132 KCNH8Q96L42 1107 aa21.57■■□□□ 1.04
KCNQ4-201ENST00000347132 ANP32CO43423 234 aa21.48■■□□□ 1.03
KCNQ4-201ENST00000347132 CEP164Q9UPV0 1460 aa21.46■■□□□ 1.03
KCNQ4-201ENST00000347132 BAZ1BQ9UIG0 1483 aaKnown RBP21.45■■□□□ 1.02
KCNQ4-201ENST00000347132 RAPGEF2Q9Y4G8 1499 aa21.45■■□□□ 1.02
KCNQ4-201ENST00000347132 EEA1Q15075 1411 aa21.42■■□□□ 1.02
KCNQ4-201ENST00000347132 TOP2AP11388 1531 aaKnown RBP21.37■■□□□ 1.01
KCNQ4-201ENST00000347132 SUPT16HQ9Y5B9 1047 aaKnown RBP21.36■■□□□ 1.01
KCNQ4-201ENST00000347132 VPS8Q8N3P4 1428 aa21.35■■□□□ 1.01
KCNQ4-201ENST00000347132 FBLN2P98095 1184 aa21.35■■□□□ 1.01
KCNQ4-201ENST00000347132 HNRNPUQ00839 825 aaKnown RBP eCLIP21.35■■□□□ 1.01
KCNQ4-201ENST00000347132 RRP7BPQ9NSQ0 103 aa21.35■■□□□ 1.01
KCNQ4-201ENST00000347132 FAM9BQ8IZU0 186 aa21.3■■□□□ 1
KCNQ4-201ENST00000347132 ZNF777Q9ULD5 760 aaPredicted RBP21.29■■□□□ 1
KCNQ4-201ENST00000347132 SMARCA2P51531 1590 aa21.28■■□□□ 1
KCNQ4-201ENST00000347132 SMARCA4P51532 1647 aa21.28■■□□□ 1
KCNQ4-201ENST00000347132 TONSLQ96HA7 1378 aa21.26■□□□□ 0.99
KCNQ4-201ENST00000347132 SALL2Q9Y467 1007 aaPredicted RBP21.23■□□□□ 0.99
KCNQ4-201ENST00000347132 CCNB3Q8WWL7 1395 aa21.21■□□□□ 0.99
KCNQ4-201ENST00000347132 MYT1LQ9UL68 1186 aa21.18■□□□□ 0.98
KCNQ4-201ENST00000347132 KIF27Q86VH2 1401 aa21.17■□□□□ 0.98
KCNQ4-201ENST00000347132 DHX57Q6P158 1386 aaKnown RBP21.16■□□□□ 0.98
KCNQ4-201ENST00000347132 FOXD1Q16676 465 aa21.16■□□□□ 0.98
KCNQ4-201ENST00000347132 RAB3GAP2Q9H2M9 1393 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms