RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 NISCHQ9Y2I1 1504 aa21.2■□□□□ 0.98
SSX2IP-201ENST00000342203 SUPT5HO00267 1087 aaKnown RBP21.03■□□□□ 0.96
SSX2IP-201ENST00000342203 DCAF8L2P0C7V8 631 aa20.87■□□□□ 0.93
SSX2IP-201ENST00000342203 SHROOM4Q9ULL8 1493 aa20.7■□□□□ 0.9
SSX2IP-201ENST00000342203 PCGF6Q9BYE7 350 aa20.49■□□□□ 0.87
SSX2IP-201ENST00000342203 EHMT2Q96KQ7 1210 aa20.18■□□□□ 0.82
SSX2IP-201ENST00000342203 HRCP23327 699 aa20.01■□□□□ 0.79
SSX2IP-201ENST00000342203 PPARGC1BQ86YN6 1023 aaKnown RBP19.92■□□□□ 0.78
SSX2IP-201ENST00000342203 PELP1Q8IZL8 1130 aaKnown RBP19.85■□□□□ 0.77
SSX2IP-201ENST00000342203 FAM9AQ8IZU1 332 aaPredicted RBP19.75■□□□□ 0.75
SSX2IP-201ENST00000342203 TTBK1Q5TCY1 1321 aaPredicted RBP19.59■□□□□ 0.73
SSX2IP-201ENST00000342203 ZEB1P37275 1124 aaPredicted RBP19.52■□□□□ 0.71
SSX2IP-201ENST00000342203 LOC105371045A0A1W2PR82 267 aa19.48■□□□□ 0.71
SSX2IP-201ENST00000342203 CENPBP07199 599 aaPredicted RBP19.47■□□□□ 0.71
SSX2IP-201ENST00000342203 CHIC1Q5VXU3 224 aa19.43■□□□□ 0.7
SSX2IP-201ENST00000342203 CCER1Q8TC90 406 aaPredicted RBP19.4■□□□□ 0.7
SSX2IP-201ENST00000342203 TRIM26Q12899 539 aaPredicted RBP19.38■□□□□ 0.69
SSX2IP-201ENST00000342203 YTHDC1Q96MU7 727 aaKnown RBP19.34■□□□□ 0.69
SSX2IP-201ENST00000342203 MYT1Q01538 1121 aa19.24■□□□□ 0.67
SSX2IP-201ENST00000342203 TRIM41Q8WV44 630 aa19.23■□□□□ 0.67
SSX2IP-201ENST00000342203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.94■□□□□ 0.62
SSX2IP-201ENST00000342203 GTF3C3Q9Y5Q9 886 aa18.93■□□□□ 0.62
SSX2IP-201ENST00000342203 APLP2Q06481 763 aa18.92■□□□□ 0.62
SSX2IP-201ENST00000342203 RANGAP1P46060 587 aaPredicted RBP18.88■□□□□ 0.61
SSX2IP-201ENST00000342203 DIEXFQ68CQ4 756 aaKnown RBP18.85■□□□□ 0.61
SSX2IP-201ENST00000342203 SCAF1Q9H7N4 1312 aaKnown RBP18.79■□□□□ 0.6
SSX2IP-201ENST00000342203 ACIN1Q9UKV3 1341 aaKnown RBP18.73■□□□□ 0.59
SSX2IP-201ENST00000342203 UBTFP17480 764 aaKnown RBP18.72■□□□□ 0.59
SSX2IP-201ENST00000342203 ERICH6Q7L0X2 663 aa18.71■□□□□ 0.59
SSX2IP-201ENST00000342203 NEUROD1Q13562 356 aa18.59■□□□□ 0.57
SSX2IP-201ENST00000342203 HNRNPUL2Q1KMD3 747 aaKnown RBP18.59■□□□□ 0.57
SSX2IP-201ENST00000342203 NEFLP07196 543 aa18.53■□□□□ 0.56
SSX2IP-201ENST00000342203 MYO15BQ96JP2 1530 aa18.53■□□□□ 0.56
SSX2IP-201ENST00000342203 BCANQ96GW7 911 aa18.37■□□□□ 0.53
SSX2IP-201ENST00000342203 DCAF1Q9Y4B6 1507 aa18.35■□□□□ 0.53
SSX2IP-201ENST00000342203 ITGAEP38570 1179 aa18.31■□□□□ 0.52
SSX2IP-201ENST00000342203 ZNF316A6NFI3 1004 aaPredicted RBP18.31■□□□□ 0.52
SSX2IP-201ENST00000342203 ATP1B4Q9UN42 357 aaPredicted RBP18.25■□□□□ 0.51
SSX2IP-201ENST00000342203 MIER1Q8N108 512 aa18.05■□□□□ 0.48
SSX2IP-201ENST00000342203 CNGB1Q14028 1251 aaPredicted RBP18.01■□□□□ 0.47
SSX2IP-201ENST00000342203 FKBP8Q14318 412 aa17.88■□□□□ 0.45
SSX2IP-201ENST00000342203 POLR3GLQ9BT43 218 aa17.83■□□□□ 0.45
SSX2IP-201ENST00000342203 CCDC180Q9P1Z9 1646 aa17.8■□□□□ 0.44
SSX2IP-201ENST00000342203 RTL5Q5HYW3 569 aaPredicted RBP17.78■□□□□ 0.44
SSX2IP-201ENST00000342203 CDK11AQ9UQ88 783 aaPredicted RBP17.76■□□□□ 0.43
SSX2IP-201ENST00000342203 ZCCHC6Q5VYS8 1495 aaKnown RBP17.73■□□□□ 0.43
SSX2IP-201ENST00000342203 ANP32EQ9BTT0 268 aa17.71■□□□□ 0.43
SSX2IP-201ENST00000342203 ANP32CO43423 234 aa17.7■□□□□ 0.42
SSX2IP-201ENST00000342203 CSRNP3Q8WYN3 585 aa17.7■□□□□ 0.42
SSX2IP-201ENST00000342203 FAM50AQ14320 339 aaKnown RBP17.69■□□□□ 0.42
SSX2IP-201ENST00000342203 TRIM52Q96A61 297 aa17.67■□□□□ 0.42
SSX2IP-201ENST00000342203 DDX10Q13206 875 aaKnown RBP17.66■□□□□ 0.42
SSX2IP-201ENST00000342203 DAXXQ9UER7 740 aaPredicted RBP17.63■□□□□ 0.41
SSX2IP-201ENST00000342203 CLSPNQ9HAW4 1339 aa17.63■□□□□ 0.41
SSX2IP-201ENST00000342203 BCL11AQ9H165 835 aa17.61■□□□□ 0.41
SSX2IP-201ENST00000342203 SUPT16HQ9Y5B9 1047 aaKnown RBP17.59■□□□□ 0.41
SSX2IP-201ENST00000342203 IRX6P78412 446 aaPredicted RBP17.57■□□□□ 0.4
SSX2IP-201ENST00000342203 HIRIP3Q9BW71 556 aaPredicted RBP17.54■□□□□ 0.4
SSX2IP-201ENST00000342203 NBR1Q14596 966 aa17.53■□□□□ 0.4
SSX2IP-201ENST00000342203 HNRNPUQ00839 825 aaKnown RBP eCLIP17.5■□□□□ 0.39
SSX2IP-201ENST00000342203 NPM2Q86SE8 214 aaKnown RBP17.44■□□□□ 0.38
SSX2IP-201ENST00000342203 EIF5BO60841 1220 aaKnown RBP17.39■□□□□ 0.38
SSX2IP-201ENST00000342203 TSHZ2Q9NRE2 1034 aa17.39■□□□□ 0.37
SSX2IP-201ENST00000342203 ANP32AP39687 249 aaKnown RBP17.38■□□□□ 0.37
SSX2IP-201ENST00000342203 CEP162Q5TB80 1403 aa17.35■□□□□ 0.37
SSX2IP-201ENST00000342203 PABPN1Q86U42 306 aaKnown RBP eCLIP17.34■□□□□ 0.37
SSX2IP-201ENST00000342203 RSF1Q96T23 1441 aaPredicted RBP17.34■□□□□ 0.37
SSX2IP-201ENST00000342203 FAM9BQ8IZU0 186 aa17.34■□□□□ 0.37
SSX2IP-201ENST00000342203 P3H3Q8IVL6 736 aa17.33■□□□□ 0.36
SSX2IP-201ENST00000342203 ZNF326Q5BKZ1 582 aaKnown RBP17.31■□□□□ 0.36
SSX2IP-201ENST00000342203 RBM19Q9Y4C8 960 aaKnown RBP17.29■□□□□ 0.36
SSX2IP-201ENST00000342203 SCRIBQ14160 1630 aa17.27■□□□□ 0.36
SSX2IP-201ENST00000342203 ABCC9O60706 1549 aa17.26■□□□□ 0.35
SSX2IP-201ENST00000342203 SENP3-EIF4A1A0A087X0R7 540 aa17.23■□□□□ 0.35
SSX2IP-201ENST00000342203 ZBTB47Q9UFB7 747 aaPredicted RBP17.2■□□□□ 0.34
SSX2IP-201ENST00000342203 RTN4Q9NQC3 1192 aaKnown RBP17.2■□□□□ 0.34
SSX2IP-201ENST00000342203 MYT1LQ9UL68 1186 aa17.19■□□□□ 0.34
SSX2IP-201ENST00000342203 CLIP1P30622 1438 aa17.19■□□□□ 0.34
SSX2IP-201ENST00000342203 CCDC136Q96JN2 1154 aa17.18■□□□□ 0.34
SSX2IP-201ENST00000342203 TONSLQ96HA7 1378 aa17.18■□□□□ 0.34
SSX2IP-201ENST00000342203 SALL2Q9Y467 1007 aaPredicted RBP17.17■□□□□ 0.34
SSX2IP-201ENST00000342203 KCNH8Q96L42 1107 aa17.15■□□□□ 0.34
SSX2IP-201ENST00000342203 SIN3AQ96ST3 1273 aa17.13■□□□□ 0.33
SSX2IP-201ENST00000342203 MRS2Q9HD23 443 aa17.12■□□□□ 0.33
SSX2IP-201ENST00000342203 TNIKQ9UKE5 1360 aa17.1■□□□□ 0.33
SSX2IP-201ENST00000342203 DEKP35659 375 aaKnown RBP17.09■□□□□ 0.33
SSX2IP-201ENST00000342203 B4GALNT3Q6L9W6 998 aa17.08■□□□□ 0.32
SSX2IP-201ENST00000342203 ARID3CA6NKF2 412 aa17.08■□□□□ 0.32
SSX2IP-201ENST00000342203 SOGA1O94964 1423 aa17.01■□□□□ 0.31
SSX2IP-201ENST00000342203 ARXQ96QS3 562 aa17.01■□□□□ 0.31
SSX2IP-201ENST00000342203 GOLGA3Q08378 1498 aa16.99■□□□□ 0.31
SSX2IP-201ENST00000342203 CHIC2Q9UKJ5 165 aa16.99■□□□□ 0.31
SSX2IP-201ENST00000342203 NOP58Q9Y2X3 529 aaKnown RBP16.98■□□□□ 0.31
SSX2IP-201ENST00000342203 LAS1LQ9Y4W2 734 aaKnown RBP16.98■□□□□ 0.31
SSX2IP-201ENST00000342203 RB1CC1Q8TDY2 1594 aa16.98■□□□□ 0.31
SSX2IP-201ENST00000342203 PPP4R2Q9NY27 417 aa16.95■□□□□ 0.3
SSX2IP-201ENST00000342203 SLC4A1APQ9BWU0 796 aaKnown RBP16.94■□□□□ 0.3
SSX2IP-201ENST00000342203 TMC1Q8TDI8 760 aa16.92■□□□□ 0.3
SSX2IP-201ENST00000342203 CECR2Q9BXF3 1484 aa16.9■□□□□ 0.3
SSX2IP-201ENST00000342203 KANK4Q5T7N3 995 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms