RNA–Protein interactions for RNA: ENST00000340553.7

FOXN2-201, Transcript of forkhead box N2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN2, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN2-201ENST00000340553 NISCHQ9Y2I1 1504 aa11.43□□□□□ -0.58
FOXN2-201ENST00000340553 DCAF8L2P0C7V8 631 aa10.54□□□□□ -0.72
FOXN2-201ENST00000340553 SHROOM4Q9ULL8 1493 aa10.18□□□□□ -0.78
FOXN2-201ENST00000340553 SUPT5HO00267 1087 aaKnown RBP9.97□□□□□ -0.81
FOXN2-201ENST00000340553 ABCC9O60706 1549 aa9.73□□□□□ -0.85
FOXN2-201ENST00000340553 CCDC180Q9P1Z9 1646 aa9.62□□□□□ -0.87
FOXN2-201ENST00000340553 ZCCHC6Q5VYS8 1495 aaKnown RBP9.53□□□□□ -0.88
FOXN2-201ENST00000340553 EHMT2Q96KQ7 1210 aa9.45□□□□□ -0.9
FOXN2-201ENST00000340553 PABPN1Q86U42 306 aaKnown RBP eCLIP9.44□□□□□ -0.9
FOXN2-201ENST00000340553 SCRIBQ14160 1630 aa9.36□□□□□ -0.91
FOXN2-201ENST00000340553 FAM9AQ8IZU1 332 aaPredicted RBP9.33□□□□□ -0.92
FOXN2-201ENST00000340553 TRIM41Q8WV44 630 aa9.22□□□□□ -0.93
FOXN2-201ENST00000340553 CHIC1Q5VXU3 224 aa9.18□□□□□ -0.94
FOXN2-201ENST00000340553 RB1CC1Q8TDY2 1594 aa9.16□□□□□ -0.94
FOXN2-201ENST00000340553 NACADO15069 1562 aa9.15□□□□□ -0.95
FOXN2-201ENST00000340553 DCAF1Q9Y4B6 1507 aa9.14□□□□□ -0.95
FOXN2-201ENST00000340553 RANGAP1P46060 587 aaPredicted RBP9.08□□□□□ -0.96
FOXN2-201ENST00000340553 LOC105371045A0A1W2PR82 267 aa9.07□□□□□ -0.96
FOXN2-201ENST00000340553 TTBK1Q5TCY1 1321 aaPredicted RBP9.04□□□□□ -0.96
FOXN2-201ENST00000340553 CECR2Q9BXF3 1484 aa9.04□□□□□ -0.96
FOXN2-201ENST00000340553 RSF1Q96T23 1441 aaPredicted RBP9.02□□□□□ -0.96
FOXN2-201ENST00000340553 UBTFP17480 764 aaKnown RBP8.97□□□□□ -0.97
FOXN2-201ENST00000340553 MYO15BQ96JP2 1530 aa8.95□□□□□ -0.98
FOXN2-201ENST00000340553 PPARGC1BQ86YN6 1023 aaKnown RBP8.94□□□□□ -0.98
FOXN2-201ENST00000340553 PCGF6Q9BYE7 350 aa8.94□□□□□ -0.98
FOXN2-201ENST00000340553 MROH2BQ7Z745 1585 aa8.91□□□□□ -0.98
FOXN2-201ENST00000340553 BAZ1AQ9NRL2 1556 aaPredicted RBP8.85□□□□□ -0.99
FOXN2-201ENST00000340553 APLP2Q06481 763 aa8.85□□□□□ -0.99
FOXN2-201ENST00000340553 ATP1B4Q9UN42 357 aaPredicted RBP8.82□□□□□ -1
FOXN2-201ENST00000340553 WIZO95785 1651 aa8.82□□□□□ -1
FOXN2-201ENST00000340553 BAZ1BQ9UIG0 1483 aaKnown RBP8.79□□□□□ -1
FOXN2-201ENST00000340553 CCDC88BA6NC98 1476 aa8.73□□□□□ -1.01
FOXN2-201ENST00000340553 SMARCA4P51532 1647 aa8.72□□□□□ -1.01
FOXN2-201ENST00000340553 CSRNP3Q8WYN3 585 aa8.71□□□□□ -1.02
FOXN2-201ENST00000340553 ATAD2BQ9ULI0 1458 aa8.67□□□□□ -1.02
FOXN2-201ENST00000340553 ABCC8Q09428 1581 aa8.67□□□□□ -1.02
FOXN2-201ENST00000340553 TOP2AP11388 1531 aaKnown RBP8.66□□□□□ -1.02
FOXN2-201ENST00000340553 BICRAQ9NZM4 1560 aa8.65□□□□□ -1.02
FOXN2-201ENST00000340553 TRIM26Q12899 539 aaPredicted RBP8.65□□□□□ -1.02
FOXN2-201ENST00000340553 WRNQ14191 1432 aaPredicted RBP eCLIP8.64□□□□□ -1.03
FOXN2-201ENST00000340553 SMARCA2P51531 1590 aa8.64□□□□□ -1.03
FOXN2-201ENST00000340553 UNC13AQ9UPW8 1703 aa8.63□□□□□ -1.03
FOXN2-201ENST00000340553 FBLN2P98095 1184 aa8.62□□□□□ -1.03
FOXN2-201ENST00000340553 P3H3Q8IVL6 736 aa8.62□□□□□ -1.03
FOXN2-201ENST00000340553 ITGAEP38570 1179 aa8.61□□□□□ -1.03
FOXN2-201ENST00000340553 CCER1Q8TC90 406 aaPredicted RBP8.6□□□□□ -1.03
FOXN2-201ENST00000340553 SOGA1O94964 1423 aa8.59□□□□□ -1.03
FOXN2-201ENST00000340553 EIF4G1Q04637 1599 aaKnown RBP8.59□□□□□ -1.03
FOXN2-201ENST00000340553 HNRNPUL2Q1KMD3 747 aaKnown RBP8.59□□□□□ -1.04
FOXN2-201ENST00000340553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.58□□□□□ -1.04
FOXN2-201ENST00000340553 ARID3CA6NKF2 412 aa8.55□□□□□ -1.04
FOXN2-201ENST00000340553 DNAJC5BQ9UF47 199 aa8.52□□□□□ -1.05
FOXN2-201ENST00000340553 CADPSQ9ULU8 1353 aa8.49□□□□□ -1.05
FOXN2-201ENST00000340553 NCAPD3P42695 1498 aa8.49□□□□□ -1.05
FOXN2-201ENST00000340553 RUSC2Q8N2Y8 1516 aa8.49□□□□□ -1.05
FOXN2-201ENST00000340553 CC2D2AQ9P2K1 1620 aa8.48□□□□□ -1.05
FOXN2-201ENST00000340553 HRCP23327 699 aa8.47□□□□□ -1.05
FOXN2-201ENST00000340553 CEP162Q5TB80 1403 aa8.46□□□□□ -1.05
FOXN2-201ENST00000340553 KIF27Q86VH2 1401 aa8.46□□□□□ -1.06
FOXN2-201ENST00000340553 ERCC6Q03468 1493 aa8.46□□□□□ -1.06
FOXN2-201ENST00000340553 CUX2O14529 1486 aa8.46□□□□□ -1.06
FOXN2-201ENST00000340553 GOLGA3Q08378 1498 aa8.45□□□□□ -1.06
FOXN2-201ENST00000340553 FAM50AQ14320 339 aaKnown RBP8.45□□□□□ -1.06
FOXN2-201ENST00000340553 CLIP1P30622 1438 aa8.45□□□□□ -1.06
FOXN2-201ENST00000340553 EEA1Q15075 1411 aa8.45□□□□□ -1.06
FOXN2-201ENST00000340553 NESP48681 1621 aa8.43□□□□□ -1.06
FOXN2-201ENST00000340553 TDRD9Q8NDG6 1382 aaKnown RBP8.42□□□□□ -1.06
FOXN2-201ENST00000340553 CEP164Q9UPV0 1460 aa8.41□□□□□ -1.06
FOXN2-201ENST00000340553 FANCD2Q9BXW9 1451 aa8.41□□□□□ -1.06
FOXN2-201ENST00000340553 ZEB1P37275 1124 aaPredicted RBP8.41□□□□□ -1.06
FOXN2-201ENST00000340553 TNIKQ9UKE5 1360 aa8.4□□□□□ -1.06
FOXN2-201ENST00000340553 PDS5BQ9NTI5 1447 aa8.4□□□□□ -1.06
FOXN2-201ENST00000340553 CHMP7Q8WUX9 453 aaPredicted RBP8.4□□□□□ -1.06
FOXN2-201ENST00000340553 CARMIL1Q5VZK9 1371 aa8.38□□□□□ -1.07
FOXN2-201ENST00000340553 HMGXB3Q12766 1538 aa8.38□□□□□ -1.07
FOXN2-201ENST00000340553 SYNJ1O43426 1573 aa8.37□□□□□ -1.07
FOXN2-201ENST00000340553 RAPGEF2Q9Y4G8 1499 aa8.36□□□□□ -1.07
FOXN2-201ENST00000340553 CFTRP13569 1480 aa8.36□□□□□ -1.07
FOXN2-201ENST00000340553 RAD54L2Q9Y4B4 1467 aa8.35□□□□□ -1.07
FOXN2-201ENST00000340553 PEG3Q9GZU2 1588 aa8.34□□□□□ -1.07
FOXN2-201ENST00000340553 FGD5Q6ZNL6 1462 aa8.34□□□□□ -1.08
FOXN2-201ENST00000340553 MYT1LQ9UL68 1186 aa8.33□□□□□ -1.08
FOXN2-201ENST00000340553 ZNF777Q9ULD5 760 aaPredicted RBP8.31□□□□□ -1.08
FOXN2-201ENST00000340553 CUX1P39880 1505 aa8.3□□□□□ -1.08
FOXN2-201ENST00000340553 NEUROD1Q13562 356 aa8.28□□□□□ -1.08
FOXN2-201ENST00000340553 TRIM52Q96A61 297 aa8.27□□□□□ -1.09
FOXN2-201ENST00000340553 IGF1RP08069 1367 aa8.27□□□□□ -1.09
FOXN2-201ENST00000340553 KANK4Q5T7N3 995 aaPredicted RBP8.27□□□□□ -1.09
FOXN2-201ENST00000340553 MTUS2Q5JR59 1369 aa8.26□□□□□ -1.09
FOXN2-201ENST00000340553 CHIC2Q9UKJ5 165 aa8.26□□□□□ -1.09
FOXN2-201ENST00000340553 AQRO60306 1485 aaKnown RBP eCLIP8.25□□□□□ -1.092e-6■■■■□ 22.1
FOXN2-201ENST00000340553 TOP2BQ02880 1626 aa8.24□□□□□ -1.09
FOXN2-201ENST00000340553 VPS8Q8N3P4 1428 aa8.23□□□□□ -1.09
FOXN2-201ENST00000340553 TOPBP1Q92547 1522 aa8.23□□□□□ -1.09
FOXN2-201ENST00000340553 CDK11AQ9UQ88 783 aaPredicted RBP8.23□□□□□ -1.09
FOXN2-201ENST00000340553 FHOD3Q2V2M9 1422 aa8.22□□□□□ -1.09
FOXN2-201ENST00000340553 POLA1P09884 1462 aaPredicted RBP8.22□□□□□ -1.09
FOXN2-201ENST00000340553 GAPVD1Q14C86 1478 aa8.21□□□□□ -1.09
FOXN2-201ENST00000340553 YTHDC1Q96MU7 727 aaKnown RBP8.2□□□□□ -1.1
FOXN2-201ENST00000340553 KCNH8Q96L42 1107 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms