RNA–Protein interactions for RNA: ENST00000339365.2

SEC24C-201, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC24C, Length 4,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-201ENST00000339365 NISCHQ9Y2I1 1504 aa20.96■□□□□ 0.95
SEC24C-201ENST00000339365 DCAF8L2P0C7V8 631 aa20.25■□□□□ 0.83
SEC24C-201ENST00000339365 SHROOM4Q9ULL8 1493 aa18.68■□□□□ 0.58
SEC24C-201ENST00000339365 SUPT5HO00267 1087 aaKnown RBP18.52■□□□□ 0.56
SEC24C-201ENST00000339365 ABCC9O60706 1549 aa18.35■□□□□ 0.53
SEC24C-201ENST00000339365 PABPN1Q86U42 306 aaKnown RBP eCLIP17.81■□□□□ 0.44
SEC24C-201ENST00000339365 CCDC180Q9P1Z9 1646 aa17.75■□□□□ 0.43
SEC24C-201ENST00000339365 FAM9AQ8IZU1 332 aaPredicted RBP17.59■□□□□ 0.41
SEC24C-201ENST00000339365 EHMT2Q96KQ7 1210 aa17.47■□□□□ 0.39
SEC24C-201ENST00000339365 TRIM41Q8WV44 630 aa17.35■□□□□ 0.37
SEC24C-201ENST00000339365 RB1CC1Q8TDY2 1594 aa17.33■□□□□ 0.37
SEC24C-201ENST00000339365 ZCCHC6Q5VYS8 1495 aaKnown RBP17.32■□□□□ 0.36
SEC24C-201ENST00000339365 APLP2Q06481 763 aa17.29■□□□□ 0.36
SEC24C-201ENST00000339365 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
SEC24C-201ENST00000339365 NACADO15069 1562 aa17.2■□□□□ 0.34
SEC24C-201ENST00000339365 RANGAP1P46060 587 aaPredicted RBP17.09■□□□□ 0.33
SEC24C-201ENST00000339365 UBTFP17480 764 aaKnown RBP17.06■□□□□ 0.32
SEC24C-201ENST00000339365 ATP1B4Q9UN42 357 aaPredicted RBP17■□□□□ 0.31
SEC24C-201ENST00000339365 DCAF1Q9Y4B6 1507 aa16.85■□□□□ 0.29
SEC24C-201ENST00000339365 TTBK1Q5TCY1 1321 aaPredicted RBP16.78■□□□□ 0.28
SEC24C-201ENST00000339365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.73■□□□□ 0.27
SEC24C-201ENST00000339365 HNRNPUL2Q1KMD3 747 aaKnown RBP16.73■□□□□ 0.27
SEC24C-201ENST00000339365 FBLN2P98095 1184 aa16.73■□□□□ 0.27
SEC24C-201ENST00000339365 MYO15BQ96JP2 1530 aa16.65■□□□□ 0.26
SEC24C-201ENST00000339365 CHIC1Q5VXU3 224 aa16.62■□□□□ 0.25
SEC24C-201ENST00000339365 BAZ1BQ9UIG0 1483 aaKnown RBP16.55■□□□□ 0.24
SEC24C-201ENST00000339365 MYT1LQ9UL68 1186 aa16.54■□□□□ 0.24
SEC24C-201ENST00000339365 BAZ1AQ9NRL2 1556 aaPredicted RBP16.48■□□□□ 0.23
SEC24C-201ENST00000339365 RSF1Q96T23 1441 aaPredicted RBP16.43■□□□□ 0.22
SEC24C-201ENST00000339365 ERCC6Q03468 1493 aa16.42■□□□□ 0.22
SEC24C-201ENST00000339365 CECR2Q9BXF3 1484 aa16.36■□□□□ 0.21
SEC24C-201ENST00000339365 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
SEC24C-201ENST00000339365 LOC105371045A0A1W2PR82 267 aa16.3■□□□□ 0.2
SEC24C-201ENST00000339365 CHMP7Q8WUX9 453 aaPredicted RBP16.29■□□□□ 0.2
SEC24C-201ENST00000339365 SMARCA2P51531 1590 aa16.29■□□□□ 0.2
SEC24C-201ENST00000339365 NPM1P06748 294 aaKnown RBP eCLIP16.26■□□□□ 0.19
SEC24C-201ENST00000339365 PPARGC1BQ86YN6 1023 aaKnown RBP16.21■□□□□ 0.19
SEC24C-201ENST00000339365 PCGF6Q9BYE7 350 aa16.21■□□□□ 0.19
SEC24C-201ENST00000339365 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
SEC24C-201ENST00000339365 ITGAEP38570 1179 aa16.18■□□□□ 0.18
SEC24C-201ENST00000339365 P3H3Q8IVL6 736 aa16.17■□□□□ 0.18
SEC24C-201ENST00000339365 MROH2BQ7Z745 1585 aa16.14■□□□□ 0.17
SEC24C-201ENST00000339365 CDK11AQ9UQ88 783 aaPredicted RBP16.14■□□□□ 0.17
SEC24C-201ENST00000339365 CCER1Q8TC90 406 aaPredicted RBP16.08■□□□□ 0.17
SEC24C-201ENST00000339365 WRNQ14191 1432 aaPredicted RBP eCLIP16.08■□□□□ 0.17
SEC24C-201ENST00000339365 ATAD2BQ9ULI0 1458 aa16.08■□□□□ 0.16
SEC24C-201ENST00000339365 ARID3CA6NKF2 412 aa16.07■□□□□ 0.16
SEC24C-201ENST00000339365 CADPSQ9ULU8 1353 aa16.03■□□□□ 0.16
SEC24C-201ENST00000339365 FAM50AQ14320 339 aaKnown RBP16.02■□□□□ 0.15
SEC24C-201ENST00000339365 KIF27Q86VH2 1401 aa15.97■□□□□ 0.15
SEC24C-201ENST00000339365 SMARCA4P51532 1647 aa15.96■□□□□ 0.15
SEC24C-201ENST00000339365 EIF4G1Q04637 1599 aaKnown RBP15.95■□□□□ 0.14
SEC24C-201ENST00000339365 CCDC88BA6NC98 1476 aa15.95■□□□□ 0.14
SEC24C-201ENST00000339365 TRIM26Q12899 539 aaPredicted RBP15.91■□□□□ 0.14
SEC24C-201ENST00000339365 TOP2AP11388 1531 aaKnown RBP15.9■□□□□ 0.14
SEC24C-201ENST00000339365 EEA1Q15075 1411 aa15.9■□□□□ 0.14
SEC24C-201ENST00000339365 NCAPD3P42695 1498 aa15.89■□□□□ 0.13
SEC24C-201ENST00000339365 ZNF777Q9ULD5 760 aaPredicted RBP15.89■□□□□ 0.13
SEC24C-201ENST00000339365 ZEB1P37275 1124 aaPredicted RBP15.87■□□□□ 0.13
SEC24C-201ENST00000339365 ESF1Q9H501 851 aaKnown RBP15.87■□□□□ 0.13
SEC24C-201ENST00000339365 CEP164Q9UPV0 1460 aa15.86■□□□□ 0.13
SEC24C-201ENST00000339365 WIZO95785 1651 aa15.85■□□□□ 0.13
SEC24C-201ENST00000339365 TRIM52Q96A61 297 aa15.84■□□□□ 0.13
SEC24C-201ENST00000339365 SOGA1O94964 1423 aa15.83■□□□□ 0.12
SEC24C-201ENST00000339365 CUX2O14529 1486 aa15.82■□□□□ 0.12
SEC24C-201ENST00000339365 TDRD9Q8NDG6 1382 aaKnown RBP15.77■□□□□ 0.12
SEC24C-201ENST00000339365 FANCD2Q9BXW9 1451 aa15.77■□□□□ 0.12
SEC24C-201ENST00000339365 PLEKHD1A6NEE1 506 aa15.76■□□□□ 0.11
SEC24C-201ENST00000339365 CC2D2AQ9P2K1 1620 aa15.75■□□□□ 0.11
SEC24C-201ENST00000339365 KCNH8Q96L42 1107 aa15.74■□□□□ 0.11
SEC24C-201ENST00000339365 ABCC8Q09428 1581 aa15.74■□□□□ 0.11
SEC24C-201ENST00000339365 CARMIL1Q5VZK9 1371 aa15.74■□□□□ 0.11
SEC24C-201ENST00000339365 DNAJC5BQ9UF47 199 aa15.74■□□□□ 0.11
SEC24C-201ENST00000339365 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
SEC24C-201ENST00000339365 MTUS2Q5JR59 1369 aa15.69■□□□□ 0.1
SEC24C-201ENST00000339365 GOLGA3Q08378 1498 aa15.68■□□□□ 0.1
SEC24C-201ENST00000339365 CLIP1P30622 1438 aa15.67■□□□□ 0.1
SEC24C-201ENST00000339365 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
SEC24C-201ENST00000339365 TSPY4P0CV99 314 aa15.66■□□□□ 0.1
SEC24C-201ENST00000339365 TSPY10P0CW01 314 aa15.66■□□□□ 0.1
SEC24C-201ENST00000339365 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
SEC24C-201ENST00000339365 BCANQ96GW7 911 aa15.62■□□□□ 0.09
SEC24C-201ENST00000339365 CARMIL2Q6F5E8 1435 aa15.62■□□□□ 0.09
SEC24C-201ENST00000339365 POLR3GLQ9BT43 218 aa15.6■□□□□ 0.09
SEC24C-201ENST00000339365 PLPPR3Q6T4P5 718 aa15.59■□□□□ 0.09
SEC24C-201ENST00000339365 HMGXB3Q12766 1538 aa15.59■□□□□ 0.09
SEC24C-201ENST00000339365 STAG3Q9UJ98 1225 aa15.57■□□□□ 0.08
SEC24C-201ENST00000339365 SLC4A1APQ9BWU0 796 aaKnown RBP15.53■□□□□ 0.08
SEC24C-201ENST00000339365 TNIKQ9UKE5 1360 aa15.51■□□□□ 0.07
SEC24C-201ENST00000339365 JPH4Q96JJ6 628 aa15.5■□□□□ 0.07
SEC24C-201ENST00000339365 ARID4BQ4LE39 1312 aaPredicted RBP15.5■□□□□ 0.07
SEC24C-201ENST00000339365 CFDP1Q9UEE9 299 aaPredicted RBP15.49■□□□□ 0.07
SEC24C-201ENST00000339365 NESP48681 1621 aa15.49■□□□□ 0.07
SEC24C-201ENST00000339365 CFTRP13569 1480 aa15.49■□□□□ 0.07
SEC24C-201ENST00000339365 NEUROD1Q13562 356 aa15.48■□□□□ 0.07
SEC24C-201ENST00000339365 CHGAP10645 457 aaKnown RBP15.47■□□□□ 0.07
SEC24C-201ENST00000339365 CHIC2Q9UKJ5 165 aa15.47■□□□□ 0.07
SEC24C-201ENST00000339365 ZNF326Q5BKZ1 582 aaKnown RBP15.47■□□□□ 0.07
SEC24C-201ENST00000339365 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.47■□□□□ 0.073e-6■■□□□ 14.3
SEC24C-201ENST00000339365 MRC2Q9UBG0 1479 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms