RNA–Protein interactions for RNA: ENST00000338581.10

OTOF-202, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-202ENST00000338581 DCAF8L2P0C7V8 631 aa23.34■■□□□ 1.33
OTOF-202ENST00000338581 PELP1Q8IZL8 1130 aaKnown RBP23.31■■□□□ 1.32
OTOF-202ENST00000338581 SUPT5HO00267 1087 aaKnown RBP22.69■■□□□ 1.22
OTOF-202ENST00000338581 MYT1Q01538 1121 aa22.48■■□□□ 1.19
OTOF-202ENST00000338581 ERICH6Q7L0X2 663 aa22.26■■□□□ 1.15
OTOF-202ENST00000338581 CENPBP07199 599 aaPredicted RBP22.22■■□□□ 1.15
OTOF-202ENST00000338581 CCER1Q8TC90 406 aaPredicted RBP22.2■■□□□ 1.14
OTOF-202ENST00000338581 APLP2Q06481 763 aa22.02■■□□□ 1.12
OTOF-202ENST00000338581 EHMT2Q96KQ7 1210 aa21.99■■□□□ 1.11
OTOF-202ENST00000338581 ZEB1P37275 1124 aaPredicted RBP21.94■■□□□ 1.1
OTOF-202ENST00000338581 PCGF6Q9BYE7 350 aa21.91■■□□□ 1.1
OTOF-202ENST00000338581 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.08
OTOF-202ENST00000338581 NEFLP07196 543 aa21.63■■□□□ 1.05
OTOF-202ENST00000338581 FAM9AQ8IZU1 332 aaPredicted RBP21.44■■□□□ 1.02
OTOF-202ENST00000338581 NISCHQ9Y2I1 1504 aa21.42■■□□□ 1.02
OTOF-202ENST00000338581 TTBK1Q5TCY1 1321 aaPredicted RBP21.41■■□□□ 1.02
OTOF-202ENST00000338581 YTHDC1Q96MU7 727 aaKnown RBP21.32■■□□□ 1
OTOF-202ENST00000338581 DAXXQ9UER7 740 aaPredicted RBP21.1■□□□□ 0.97
OTOF-202ENST00000338581 TRIM41Q8WV44 630 aa21.02■□□□□ 0.96
OTOF-202ENST00000338581 HRCP23327 699 aa20.99■□□□□ 0.95
OTOF-202ENST00000338581 TRIM26Q12899 539 aaPredicted RBP20.9■□□□□ 0.94
OTOF-202ENST00000338581 RANGAP1P46060 587 aaPredicted RBP20.9■□□□□ 0.94
OTOF-202ENST00000338581 UBTFP17480 764 aaKnown RBP20.83■□□□□ 0.92
OTOF-202ENST00000338581 RTL5Q5HYW3 569 aaPredicted RBP20.82■□□□□ 0.92
OTOF-202ENST00000338581 ATP1B4Q9UN42 357 aaPredicted RBP20.8■□□□□ 0.92
OTOF-202ENST00000338581 ZNF316A6NFI3 1004 aaPredicted RBP20.56■□□□□ 0.88
OTOF-202ENST00000338581 PPARGC1BQ86YN6 1023 aaKnown RBP20.53■□□□□ 0.88
OTOF-202ENST00000338581 DIEXFQ68CQ4 756 aaKnown RBP20.43■□□□□ 0.86
OTOF-202ENST00000338581 POLR3GLQ9BT43 218 aa20.38■□□□□ 0.85
OTOF-202ENST00000338581 CLSPNQ9HAW4 1339 aa20.37■□□□□ 0.85
OTOF-202ENST00000338581 GTF3C3Q9Y5Q9 886 aa20.28■□□□□ 0.84
OTOF-202ENST00000338581 ITGAEP38570 1179 aa20.25■□□□□ 0.83
OTOF-202ENST00000338581 HNRNPUL2Q1KMD3 747 aaKnown RBP20.24■□□□□ 0.83
OTOF-202ENST00000338581 CDK11AQ9UQ88 783 aaPredicted RBP20.21■□□□□ 0.83
OTOF-202ENST00000338581 CNGB1Q14028 1251 aaPredicted RBP20.14■□□□□ 0.81
OTOF-202ENST00000338581 LOC105371045A0A1W2PR82 267 aa20.11■□□□□ 0.81
OTOF-202ENST00000338581 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.11■□□□□ 0.81
OTOF-202ENST00000338581 BCANQ96GW7 911 aa20.1■□□□□ 0.81
OTOF-202ENST00000338581 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
OTOF-202ENST00000338581 ACIN1Q9UKV3 1341 aaKnown RBP19.97■□□□□ 0.79
OTOF-202ENST00000338581 GLIPR1L2Q4G1C9 344 aa19.94■□□□□ 0.78
OTOF-202ENST00000338581 EIF5BO60841 1220 aaKnown RBP19.93■□□□□ 0.78
OTOF-202ENST00000338581 ANP32CO43423 234 aa19.93■□□□□ 0.78
OTOF-202ENST00000338581 ANP32AP39687 249 aaKnown RBP19.93■□□□□ 0.78
OTOF-202ENST00000338581 MYT1LQ9UL68 1186 aa19.92■□□□□ 0.78
OTOF-202ENST00000338581 SLC4A1APQ9BWU0 796 aaKnown RBP19.87■□□□□ 0.77
OTOF-202ENST00000338581 ZBTB47Q9UFB7 747 aaPredicted RBP19.85■□□□□ 0.77
OTOF-202ENST00000338581 ANP32BQ92688 251 aaKnown RBP19.74■□□□□ 0.75
OTOF-202ENST00000338581 NEUROD1Q13562 356 aa19.69■□□□□ 0.74
OTOF-202ENST00000338581 FAM50AQ14320 339 aaKnown RBP19.67■□□□□ 0.74
OTOF-202ENST00000338581 TRIM52Q96A61 297 aa19.64■□□□□ 0.74
OTOF-202ENST00000338581 CANXP27824 592 aaKnown RBP19.64■□□□□ 0.73
OTOF-202ENST00000338581 NPM2Q86SE8 214 aaKnown RBP19.61■□□□□ 0.73
OTOF-202ENST00000338581 FKBP8Q14318 412 aa19.53■□□□□ 0.72
OTOF-202ENST00000338581 UPF2Q9HAU5 1272 aaKnown RBP19.46■□□□□ 0.71
OTOF-202ENST00000338581 ZNF326Q5BKZ1 582 aaKnown RBP19.46■□□□□ 0.71
OTOF-202ENST00000338581 HSP90AA1P07900 732 aaKnown RBP19.45■□□□□ 0.7
OTOF-202ENST00000338581 NEFMP07197 916 aa19.43■□□□□ 0.7
OTOF-202ENST00000338581 BCL11AQ9H165 835 aa19.38■□□□□ 0.69
OTOF-202ENST00000338581 NBR1Q14596 966 aa19.36■□□□□ 0.69
OTOF-202ENST00000338581 HNRNPUQ00839 825 aaKnown RBP eCLIP19.29■□□□□ 0.68
OTOF-202ENST00000338581 CCDC136Q96JN2 1154 aa19.26■□□□□ 0.67
OTOF-202ENST00000338581 SCAF1Q9H7N4 1312 aaKnown RBP19.23■□□□□ 0.67
OTOF-202ENST00000338581 SLC24A1O60721 1099 aa19.21■□□□□ 0.67
OTOF-202ENST00000338581 TNNT2P45379 298 aaPredicted RBP19.18■□□□□ 0.66
OTOF-202ENST00000338581 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.17■□□□□ 0.66
OTOF-202ENST00000338581 ANP32EQ9BTT0 268 aa19.17■□□□□ 0.66
OTOF-202ENST00000338581 ARXQ96QS3 562 aa19.14■□□□□ 0.65
OTOF-202ENST00000338581 FAM9BQ8IZU0 186 aa19.11■□□□□ 0.65
OTOF-202ENST00000338581 TRIM44Q96DX7 344 aaPredicted RBP19.11■□□□□ 0.65
OTOF-202ENST00000338581 DDX10Q13206 875 aaKnown RBP19.09■□□□□ 0.65
OTOF-202ENST00000338581 DDRGK1Q96HY6 314 aa19.09■□□□□ 0.65
OTOF-202ENST00000338581 TONSLQ96HA7 1378 aa19.08■□□□□ 0.65
OTOF-202ENST00000338581 ERICH6BQ5W0A0 696 aa19.07■□□□□ 0.64
OTOF-202ENST00000338581 BECN1Q14457 450 aa19.02■□□□□ 0.64
OTOF-202ENST00000338581 TMC1Q8TDI8 760 aa19■□□□□ 0.63
OTOF-202ENST00000338581 PPM1GO15355 546 aaPredicted RBP18.96■□□□□ 0.63
OTOF-202ENST00000338581 DCAF1Q9Y4B6 1507 aa18.96■□□□□ 0.63
OTOF-202ENST00000338581 GOLGA6L22H0YM25 854 aa18.95■□□□□ 0.62
OTOF-202ENST00000338581 CSRNP3Q8WYN3 585 aa18.94■□□□□ 0.62
OTOF-202ENST00000338581 MRS2Q9HD23 443 aa18.93■□□□□ 0.62
OTOF-202ENST00000338581 SALL2Q9Y467 1007 aaPredicted RBP18.93■□□□□ 0.62
OTOF-202ENST00000338581 MIER1Q8N108 512 aa18.93■□□□□ 0.62
OTOF-202ENST00000338581 NCLP19338 710 aaKnown RBP18.92■□□□□ 0.62
OTOF-202ENST00000338581 IRX6P78412 446 aaPredicted RBP18.87■□□□□ 0.61
OTOF-202ENST00000338581 CDK11BP21127 795 aaKnown RBP18.86■□□□□ 0.61
OTOF-202ENST00000338581 WDR43Q15061 677 aaKnown RBP eCLIP18.86■□□□□ 0.61
OTOF-202ENST00000338581 NAP1L5Q96NT1 182 aaPredicted RBP18.86■□□□□ 0.61
OTOF-202ENST00000338581 PTMAP06454 111 aaKnown RBP18.83■□□□□ 0.61
OTOF-202ENST00000338581 MYH16Q9H6N6 1097 aa18.82■□□□□ 0.6
OTOF-202ENST00000338581 DNTTIP2Q5QJE6 756 aaKnown RBP18.81■□□□□ 0.6
OTOF-202ENST00000338581 P3H3Q8IVL6 736 aa18.76■□□□□ 0.59
OTOF-202ENST00000338581 RTN4Q9NQC3 1192 aaKnown RBP18.75■□□□□ 0.59
OTOF-202ENST00000338581 ZNF777Q9ULD5 760 aaPredicted RBP18.75■□□□□ 0.59
OTOF-202ENST00000338581 NOP58Q9Y2X3 529 aaKnown RBP18.74■□□□□ 0.59
OTOF-202ENST00000338581 ZRSR1Q15695 479 aaKnown RBP18.68■□□□□ 0.58
OTOF-202ENST00000338581 PPP4R2Q9NY27 417 aa18.66■□□□□ 0.58
OTOF-202ENST00000338581 EIF4G2P78344 907 aaKnown RBP eCLIP18.65■□□□□ 0.58
OTOF-202ENST00000338581 LAS1LQ9Y4W2 734 aaKnown RBP18.64■□□□□ 0.58
OTOF-202ENST00000338581 ARID3CA6NKF2 412 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms