RNA–Protein interactions for RNA: ENST00000338523.8

SNX10-201, Transcript of sorting nexin 10, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SNX10, Length 2,546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX10-201ENST00000338523 NISCHQ9Y2I1 1504 aa28.89■■■□□ 2.22
SNX10-201ENST00000338523 CCDC180Q9P1Z9 1646 aa24.74■■□□□ 1.55
SNX10-201ENST00000338523 DCAF8L2P0C7V8 631 aa24.31■■□□□ 1.48
SNX10-201ENST00000338523 SHROOM4Q9ULL8 1493 aa24.3■■□□□ 1.48
SNX10-201ENST00000338523 ZCCHC6Q5VYS8 1495 aaKnown RBP24.29■■□□□ 1.48
SNX10-201ENST00000338523 DCAF1Q9Y4B6 1507 aa23.65■■□□□ 1.38
SNX10-201ENST00000338523 ABCC9O60706 1549 aa23.63■■□□□ 1.37
SNX10-201ENST00000338523 SUPT5HO00267 1087 aaKnown RBP23.56■■□□□ 1.36
SNX10-201ENST00000338523 SCRIBQ14160 1630 aa23.2■■□□□ 1.3
SNX10-201ENST00000338523 MYO15BQ96JP2 1530 aa23.19■■□□□ 1.3
SNX10-201ENST00000338523 NACADO15069 1562 aa23.08■■□□□ 1.29
SNX10-201ENST00000338523 RB1CC1Q8TDY2 1594 aa22.85■■□□□ 1.25
SNX10-201ENST00000338523 RSF1Q96T23 1441 aaPredicted RBP22.67■■□□□ 1.22
SNX10-201ENST00000338523 CECR2Q9BXF3 1484 aa22.65■■□□□ 1.22
SNX10-201ENST00000338523 CHIC1Q5VXU3 224 aa22.56■■□□□ 1.2
SNX10-201ENST00000338523 PABPN1Q86U42 306 aaKnown RBP eCLIP22.54■■□□□ 1.2
SNX10-201ENST00000338523 MROH2BQ7Z745 1585 aa22.47■■□□□ 1.19
SNX10-201ENST00000338523 UNC13AQ9UPW8 1703 aa22.46■■□□□ 1.19
SNX10-201ENST00000338523 WIZO95785 1651 aa22.29■■□□□ 1.16
SNX10-201ENST00000338523 BICRAQ9NZM4 1560 aa22.28■■□□□ 1.16
SNX10-201ENST00000338523 BAZ1AQ9NRL2 1556 aaPredicted RBP22.21■■□□□ 1.15
SNX10-201ENST00000338523 SMARCA4P51532 1647 aa22.1■■□□□ 1.13
SNX10-201ENST00000338523 TRIM41Q8WV44 630 aa21.95■■□□□ 1.1
SNX10-201ENST00000338523 LOC105371045A0A1W2PR82 267 aa21.94■■□□□ 1.1
SNX10-201ENST00000338523 TOP2AP11388 1531 aaKnown RBP21.89■■□□□ 1.09
SNX10-201ENST00000338523 CCDC88BA6NC98 1476 aa21.85■■□□□ 1.09
SNX10-201ENST00000338523 FAM9AQ8IZU1 332 aaPredicted RBP21.8■■□□□ 1.08
SNX10-201ENST00000338523 SMARCA2P51531 1590 aa21.77■■□□□ 1.08
SNX10-201ENST00000338523 ATAD2BQ9ULI0 1458 aa21.74■■□□□ 1.07
SNX10-201ENST00000338523 EHMT2Q96KQ7 1210 aa21.69■■□□□ 1.06
SNX10-201ENST00000338523 PEG3Q9GZU2 1588 aa21.69■■□□□ 1.06
SNX10-201ENST00000338523 EIF4G1Q04637 1599 aaKnown RBP21.64■■□□□ 1.05
SNX10-201ENST00000338523 BAZ1BQ9UIG0 1483 aaKnown RBP21.63■■□□□ 1.05
SNX10-201ENST00000338523 ABCC8Q09428 1581 aa21.6■■□□□ 1.05
SNX10-201ENST00000338523 NCAPD3P42695 1498 aa21.42■■□□□ 1.02
SNX10-201ENST00000338523 SOGA1O94964 1423 aa21.31■■□□□ 1
SNX10-201ENST00000338523 HMGXB3Q12766 1538 aa21.29■■□□□ 1
SNX10-201ENST00000338523 WRNQ14191 1432 aaPredicted RBP eCLIP21.29■■□□□ 1
SNX10-201ENST00000338523 RUSC2Q8N2Y8 1516 aa21.25■□□□□ 0.99
SNX10-201ENST00000338523 PCGF6Q9BYE7 350 aa21.24■□□□□ 0.99
SNX10-201ENST00000338523 CC2D2AQ9P2K1 1620 aa21.21■□□□□ 0.99
SNX10-201ENST00000338523 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
SNX10-201ENST00000338523 CSRNP3Q8WYN3 585 aa21.13■□□□□ 0.97
SNX10-201ENST00000338523 CFTRP13569 1480 aa21.07■□□□□ 0.96
SNX10-201ENST00000338523 DNAJC5BQ9UF47 199 aa21.06■□□□□ 0.96
SNX10-201ENST00000338523 PPARGC1BQ86YN6 1023 aaKnown RBP21.02■□□□□ 0.95
SNX10-201ENST00000338523 UBTFP17480 764 aaKnown RBP21.01■□□□□ 0.95
SNX10-201ENST00000338523 CADPSQ9ULU8 1353 aa20.99■□□□□ 0.95
SNX10-201ENST00000338523 EEA1Q15075 1411 aa20.96■□□□□ 0.95
SNX10-201ENST00000338523 TOP2BQ02880 1626 aa20.95■□□□□ 0.94
SNX10-201ENST00000338523 CUX1P39880 1505 aa20.94■□□□□ 0.94
SNX10-201ENST00000338523 TRIM26Q12899 539 aaPredicted RBP20.92■□□□□ 0.94
SNX10-201ENST00000338523 NESP48681 1621 aa20.87■□□□□ 0.93
SNX10-201ENST00000338523 TNIKQ9UKE5 1360 aa20.86■□□□□ 0.93
SNX10-201ENST00000338523 CEP162Q5TB80 1403 aa20.85■□□□□ 0.93
SNX10-201ENST00000338523 BIVM-ERCC5R4GMW8 1640 aa20.85■□□□□ 0.93
SNX10-201ENST00000338523 RANGAP1P46060 587 aaPredicted RBP20.84■□□□□ 0.93
SNX10-201ENST00000338523 GOLGA3Q08378 1498 aa20.82■□□□□ 0.92
SNX10-201ENST00000338523 TTBK1Q5TCY1 1321 aaPredicted RBP20.79■□□□□ 0.92
SNX10-201ENST00000338523 RAPGEF2Q9Y4G8 1499 aa20.79■□□□□ 0.92
SNX10-201ENST00000338523 CEP164Q9UPV0 1460 aa20.77■□□□□ 0.92
SNX10-201ENST00000338523 FANCD2Q9BXW9 1451 aa20.77■□□□□ 0.92
SNX10-201ENST00000338523 HRCP23327 699 aa20.72■□□□□ 0.91
SNX10-201ENST00000338523 PRDM2Q13029 1718 aa20.7■□□□□ 0.9
SNX10-201ENST00000338523 KIF21BO75037 1637 aa20.69■□□□□ 0.9
SNX10-201ENST00000338523 KIF27Q86VH2 1401 aa20.67■□□□□ 0.9
SNX10-201ENST00000338523 FGD5Q6ZNL6 1462 aa20.66■□□□□ 0.9
SNX10-201ENST00000338523 CUX2O14529 1486 aa20.64■□□□□ 0.89
SNX10-201ENST00000338523 PRXQ9BXM0 1461 aa20.62■□□□□ 0.89
SNX10-201ENST00000338523 CLIP1P30622 1438 aa20.6■□□□□ 0.89
SNX10-201ENST00000338523 RAD54L2Q9Y4B4 1467 aa20.58■□□□□ 0.89
SNX10-201ENST00000338523 IGF1RP08069 1367 aa20.58■□□□□ 0.88
SNX10-201ENST00000338523 TOPBP1Q92547 1522 aa20.55■□□□□ 0.88
SNX10-201ENST00000338523 LAMC3Q9Y6N6 1575 aa20.54■□□□□ 0.88
SNX10-201ENST00000338523 POLA1P09884 1462 aaPredicted RBP20.51■□□□□ 0.87
SNX10-201ENST00000338523 URB2Q14146 1524 aaKnown RBP20.5■□□□□ 0.87
SNX10-201ENST00000338523 DNMBPQ6XZF7 1577 aa20.5■□□□□ 0.87
SNX10-201ENST00000338523 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
SNX10-201ENST00000338523 ERICH3Q5RHP9 1530 aa20.48■□□□□ 0.87
SNX10-201ENST00000338523 CARMIL1Q5VZK9 1371 aa20.46■□□□□ 0.87
SNX10-201ENST00000338523 TDRD9Q8NDG6 1382 aaKnown RBP20.41■□□□□ 0.86
SNX10-201ENST00000338523 VPS8Q8N3P4 1428 aa20.4■□□□□ 0.86
SNX10-201ENST00000338523 KIF21AQ7Z4S6 1674 aa20.4■□□□□ 0.86
SNX10-201ENST00000338523 ABCA10Q8WWZ4 1543 aa20.38■□□□□ 0.85
SNX10-201ENST00000338523 APLP2Q06481 763 aa20.34■□□□□ 0.85
SNX10-201ENST00000338523 ARAP1Q96P48 1450 aa20.34■□□□□ 0.85
SNX10-201ENST00000338523 P3H3Q8IVL6 736 aa20.3■□□□□ 0.84
SNX10-201ENST00000338523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.3■□□□□ 0.84
SNX10-201ENST00000338523 ARHGAP35Q9NRY4 1499 aa20.28■□□□□ 0.84
SNX10-201ENST00000338523 KANK4Q5T7N3 995 aaPredicted RBP20.26■□□□□ 0.83
SNX10-201ENST00000338523 GAPVD1Q14C86 1478 aa20.22■□□□□ 0.83
SNX10-201ENST00000338523 AQRO60306 1485 aaKnown RBP eCLIP20.19■□□□□ 0.827e-6■■□□□ 13.1
SNX10-201ENST00000338523 HNRNPUL2Q1KMD3 747 aaKnown RBP20.19■□□□□ 0.82
SNX10-201ENST00000338523 MRC2Q9UBG0 1479 aa20.19■□□□□ 0.82
SNX10-201ENST00000338523 WDR97A6NE52 1622 aa20.17■□□□□ 0.82
SNX10-201ENST00000338523 TARBP1Q13395 1621 aaKnown RBP20.15■□□□□ 0.82
SNX10-201ENST00000338523 CCER1Q8TC90 406 aaPredicted RBP20.14■□□□□ 0.82
SNX10-201ENST00000338523 ABCA5Q8WWZ7 1642 aa20.14■□□□□ 0.82
SNX10-201ENST00000338523 ATP1B4Q9UN42 357 aaPredicted RBP20.13■□□□□ 0.81
SNX10-201ENST00000338523 ERCC6Q03468 1493 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms