RNA–Protein interactions for RNA: ENST00000338488.8

NR4A3-202, Transcript of nuclear receptor subfamily 4 group A member 3, humanhuman

TSL 1 (best) BASIC

Gene NR4A3, Length 2,588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A3-202ENST00000338488 NISCHQ9Y2I1 1504 aa34.77■■■■□ 3.16
NR4A3-202ENST00000338488 CCDC180Q9P1Z9 1646 aa29.79■■■□□ 2.36
NR4A3-202ENST00000338488 ZCCHC6Q5VYS8 1495 aaKnown RBP29.3■■■□□ 2.28
NR4A3-202ENST00000338488 SHROOM4Q9ULL8 1493 aa29.26■■■□□ 2.28
NR4A3-202ENST00000338488 DCAF8L2P0C7V8 631 aa29■■■□□ 2.23
NR4A3-202ENST00000338488 DCAF1Q9Y4B6 1507 aa28.53■■■□□ 2.16
NR4A3-202ENST00000338488 SUPT5HO00267 1087 aaKnown RBP28.47■■■□□ 2.15
NR4A3-202ENST00000338488 ABCC9O60706 1549 aa28.06■■■□□ 2.08
NR4A3-202ENST00000338488 MYO15BQ96JP2 1530 aa27.9■■■□□ 2.06
NR4A3-202ENST00000338488 SCRIBQ14160 1630 aa27.84■■■□□ 2.05
NR4A3-202ENST00000338488 NACADO15069 1562 aa27.68■■■□□ 2.02
NR4A3-202ENST00000338488 CHIC1Q5VXU3 224 aa27.42■■□□□ 1.98
NR4A3-202ENST00000338488 RB1CC1Q8TDY2 1594 aa27.34■■□□□ 1.97
NR4A3-202ENST00000338488 RSF1Q96T23 1441 aaPredicted RBP27.31■■□□□ 1.96
NR4A3-202ENST00000338488 CECR2Q9BXF3 1484 aa27.15■■□□□ 1.94
NR4A3-202ENST00000338488 MROH2BQ7Z745 1585 aa27■■□□□ 1.91
NR4A3-202ENST00000338488 UNC13AQ9UPW8 1703 aa26.88■■□□□ 1.89
NR4A3-202ENST00000338488 WIZO95785 1651 aa26.82■■□□□ 1.88
NR4A3-202ENST00000338488 BAZ1AQ9NRL2 1556 aaPredicted RBP26.74■■□□□ 1.87
NR4A3-202ENST00000338488 PABPN1Q86U42 306 aaKnown RBP eCLIP26.73■■□□□ 1.87
NR4A3-202ENST00000338488 BICRAQ9NZM4 1560 aa26.6■■□□□ 1.85
NR4A3-202ENST00000338488 LOC105371045A0A1W2PR82 267 aa26.59■■□□□ 1.85
NR4A3-202ENST00000338488 SMARCA4P51532 1647 aa26.58■■□□□ 1.85
NR4A3-202ENST00000338488 TRIM41Q8WV44 630 aa26.56■■□□□ 1.84
NR4A3-202ENST00000338488 TOP2AP11388 1531 aaKnown RBP26.4■■□□□ 1.82
NR4A3-202ENST00000338488 FAM9AQ8IZU1 332 aaPredicted RBP26.32■■□□□ 1.8
NR4A3-202ENST00000338488 CCDC88BA6NC98 1476 aa26.29■■□□□ 1.8
NR4A3-202ENST00000338488 SMARCA2P51531 1590 aa26.24■■□□□ 1.79
NR4A3-202ENST00000338488 EIF4G1Q04637 1599 aaKnown RBP26.21■■□□□ 1.79
NR4A3-202ENST00000338488 EHMT2Q96KQ7 1210 aa26.11■■□□□ 1.77
NR4A3-202ENST00000338488 PEG3Q9GZU2 1588 aa26.09■■□□□ 1.77
NR4A3-202ENST00000338488 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
NR4A3-202ENST00000338488 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
NR4A3-202ENST00000338488 PCGF6Q9BYE7 350 aa26.03■■□□□ 1.76
NR4A3-202ENST00000338488 BAZ1BQ9UIG0 1483 aaKnown RBP25.94■■□□□ 1.74
NR4A3-202ENST00000338488 SOGA1O94964 1423 aa25.7■■□□□ 1.71
NR4A3-202ENST00000338488 HRCP23327 699 aa25.69■■□□□ 1.7
NR4A3-202ENST00000338488 WRNQ14191 1432 aaPredicted RBP eCLIP25.68■■□□□ 1.7
NR4A3-202ENST00000338488 TRIM26Q12899 539 aaPredicted RBP25.66■■□□□ 1.7
NR4A3-202ENST00000338488 NCAPD3P42695 1498 aa25.62■■□□□ 1.69
NR4A3-202ENST00000338488 RUSC2Q8N2Y8 1516 aa25.6■■□□□ 1.69
NR4A3-202ENST00000338488 HMGXB3Q12766 1538 aa25.57■■□□□ 1.68
NR4A3-202ENST00000338488 SYNJ1O43426 1573 aa25.56■■□□□ 1.68
NR4A3-202ENST00000338488 CSRNP3Q8WYN3 585 aa25.52■■□□□ 1.68
NR4A3-202ENST00000338488 EEA1Q15075 1411 aa25.47■■□□□ 1.67
NR4A3-202ENST00000338488 PPARGC1BQ86YN6 1023 aaKnown RBP25.43■■□□□ 1.66
NR4A3-202ENST00000338488 UBTFP17480 764 aaKnown RBP25.38■■□□□ 1.65
NR4A3-202ENST00000338488 TNIKQ9UKE5 1360 aa25.34■■□□□ 1.65
NR4A3-202ENST00000338488 CEP162Q5TB80 1403 aa25.33■■□□□ 1.65
NR4A3-202ENST00000338488 TOP2BQ02880 1626 aa25.29■■□□□ 1.64
NR4A3-202ENST00000338488 GOLGA3Q08378 1498 aa25.28■■□□□ 1.64
NR4A3-202ENST00000338488 CFTRP13569 1480 aa25.27■■□□□ 1.64
NR4A3-202ENST00000338488 CC2D2AQ9P2K1 1620 aa25.25■■□□□ 1.63
NR4A3-202ENST00000338488 BIVM-ERCC5R4GMW8 1640 aa25.2■■□□□ 1.62
NR4A3-202ENST00000338488 CEP164Q9UPV0 1460 aa25.19■■□□□ 1.62
NR4A3-202ENST00000338488 CUX1P39880 1505 aa25.17■■□□□ 1.62
NR4A3-202ENST00000338488 KIF21BO75037 1637 aa25.14■■□□□ 1.62
NR4A3-202ENST00000338488 TTBK1Q5TCY1 1321 aaPredicted RBP25.13■■□□□ 1.61
NR4A3-202ENST00000338488 CADPSQ9ULU8 1353 aa25.1■■□□□ 1.61
NR4A3-202ENST00000338488 RAPGEF2Q9Y4G8 1499 aa25.1■■□□□ 1.61
NR4A3-202ENST00000338488 RANGAP1P46060 587 aaPredicted RBP25.02■■□□□ 1.6
NR4A3-202ENST00000338488 PRDM2Q13029 1718 aa25■■□□□ 1.59
NR4A3-202ENST00000338488 CLIP1P30622 1438 aa24.98■■□□□ 1.59
NR4A3-202ENST00000338488 KIF27Q86VH2 1401 aa24.93■■□□□ 1.58
NR4A3-202ENST00000338488 PRXQ9BXM0 1461 aa24.91■■□□□ 1.58
NR4A3-202ENST00000338488 FANCD2Q9BXW9 1451 aa24.85■■□□□ 1.57
NR4A3-202ENST00000338488 ERICH3Q5RHP9 1530 aa24.84■■□□□ 1.57
NR4A3-202ENST00000338488 NESP48681 1621 aa24.84■■□□□ 1.57
NR4A3-202ENST00000338488 ZEB1P37275 1124 aaPredicted RBP24.84■■□□□ 1.57
NR4A3-202ENST00000338488 CUX2O14529 1486 aa24.81■■□□□ 1.56
NR4A3-202ENST00000338488 FGD5Q6ZNL6 1462 aa24.81■■□□□ 1.56
NR4A3-202ENST00000338488 VPS8Q8N3P4 1428 aa24.8■■□□□ 1.56
NR4A3-202ENST00000338488 DNAJC5BQ9UF47 199 aa24.78■■□□□ 1.56
NR4A3-202ENST00000338488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.76■■□□□ 1.55
NR4A3-202ENST00000338488 IGF1RP08069 1367 aa24.72■■□□□ 1.55
NR4A3-202ENST00000338488 APLP2Q06481 763 aa24.69■■□□□ 1.54
NR4A3-202ENST00000338488 CCER1Q8TC90 406 aaPredicted RBP24.65■■□□□ 1.54
NR4A3-202ENST00000338488 DNMBPQ6XZF7 1577 aa24.64■■□□□ 1.53
NR4A3-202ENST00000338488 ARAP1Q96P48 1450 aa24.63■■□□□ 1.53
NR4A3-202ENST00000338488 RAD54L2Q9Y4B4 1467 aa24.63■■□□□ 1.53
NR4A3-202ENST00000338488 TOPBP1Q92547 1522 aa24.63■■□□□ 1.53
NR4A3-202ENST00000338488 CARMIL1Q5VZK9 1371 aa24.61■■□□□ 1.53
NR4A3-202ENST00000338488 LAMC3Q9Y6N6 1575 aa24.6■■□□□ 1.53
NR4A3-202ENST00000338488 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.53
NR4A3-202ENST00000338488 URB2Q14146 1524 aaKnown RBP24.52■■□□□ 1.52
NR4A3-202ENST00000338488 ARHGAP35Q9NRY4 1499 aa24.52■■□□□ 1.52
NR4A3-202ENST00000338488 ABCA10Q8WWZ4 1543 aa24.5■■□□□ 1.51
NR4A3-202ENST00000338488 HNRNPUL2Q1KMD3 747 aaKnown RBP24.5■■□□□ 1.51
NR4A3-202ENST00000338488 PDS5BQ9NTI5 1447 aa24.48■■□□□ 1.51
NR4A3-202ENST00000338488 KANK4Q5T7N3 995 aaPredicted RBP24.45■■□□□ 1.5
NR4A3-202ENST00000338488 KIF21AQ7Z4S6 1674 aa24.38■■□□□ 1.49
NR4A3-202ENST00000338488 TDRD9Q8NDG6 1382 aaKnown RBP24.37■■□□□ 1.49
NR4A3-202ENST00000338488 P3H3Q8IVL6 736 aa24.34■■□□□ 1.49
NR4A3-202ENST00000338488 WDR97A6NE52 1622 aa24.3■■□□□ 1.48
NR4A3-202ENST00000338488 CUL7Q14999 1698 aa24.26■■□□□ 1.47
NR4A3-202ENST00000338488 GAPVD1Q14C86 1478 aa24.25■■□□□ 1.47
NR4A3-202ENST00000338488 ABCA5Q8WWZ7 1642 aa24.23■■□□□ 1.47
NR4A3-202ENST00000338488 FHOD3Q2V2M9 1422 aa24.19■■□□□ 1.46
NR4A3-202ENST00000338488 ATP1B4Q9UN42 357 aaPredicted RBP24.19■■□□□ 1.46
NR4A3-202ENST00000338488 TARBP1Q13395 1621 aaKnown RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms