RNA–Protein interactions for RNA: ENST00000337002.8

SEC62-201, Transcript of SEC62 homolog, preprotein translocation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC62, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC62-201ENST00000337002 NISCHQ9Y2I1 1504 aa15.56■□□□□ 0.08
SEC62-201ENST00000337002 DCAF8L2P0C7V8 631 aa13.59□□□□□ -0.23
SEC62-201ENST00000337002 CCDC180Q9P1Z9 1646 aa13.52□□□□□ -0.25
SEC62-201ENST00000337002 ABCC9O60706 1549 aa13.3□□□□□ -0.28
SEC62-201ENST00000337002 ZCCHC6Q5VYS8 1495 aaKnown RBP12.95□□□□□ -0.34
SEC62-201ENST00000337002 NACADO15069 1562 aa12.88□□□□□ -0.35
SEC62-201ENST00000337002 RB1CC1Q8TDY2 1594 aa12.86□□□□□ -0.35
SEC62-201ENST00000337002 DCAF1Q9Y4B6 1507 aa12.85□□□□□ -0.35
SEC62-201ENST00000337002 MYO15BQ96JP2 1530 aa12.83□□□□□ -0.36
SEC62-201ENST00000337002 SHROOM4Q9ULL8 1493 aa12.76□□□□□ -0.37
SEC62-201ENST00000337002 PABPN1Q86U42 306 aaKnown RBP eCLIP12.61□□□□□ -0.39
SEC62-201ENST00000337002 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
SEC62-201ENST00000337002 SUPT5HO00267 1087 aaKnown RBP12.41□□□□□ -0.42
SEC62-201ENST00000337002 BAZ1AQ9NRL2 1556 aaPredicted RBP12.14□□□□□ -0.47
SEC62-201ENST00000337002 BICRAQ9NZM4 1560 aa12.07□□□□□ -0.48
SEC62-201ENST00000337002 CECR2Q9BXF3 1484 aa12.04□□□□□ -0.48
SEC62-201ENST00000337002 RSF1Q96T23 1441 aaPredicted RBP12.02□□□□□ -0.48
SEC62-201ENST00000337002 SMARCA2P51531 1590 aa12.01□□□□□ -0.49
SEC62-201ENST00000337002 BAZ1BQ9UIG0 1483 aaKnown RBP11.99□□□□□ -0.49
SEC62-201ENST00000337002 EIF4G1Q04637 1599 aaKnown RBP11.96□□□□□ -0.5
SEC62-201ENST00000337002 ATAD2BQ9ULI0 1458 aa11.93□□□□□ -0.5
SEC62-201ENST00000337002 NCAPD3P42695 1498 aa11.92□□□□□ -0.5
SEC62-201ENST00000337002 MROH2BQ7Z745 1585 aa11.92□□□□□ -0.5
SEC62-201ENST00000337002 SMARCA4P51532 1647 aa11.9□□□□□ -0.5
SEC62-201ENST00000337002 UNC13AQ9UPW8 1703 aa11.87□□□□□ -0.51
SEC62-201ENST00000337002 CC2D2AQ9P2K1 1620 aa11.79□□□□□ -0.52
SEC62-201ENST00000337002 HMGXB3Q12766 1538 aa11.78□□□□□ -0.52
SEC62-201ENST00000337002 DNAJC5BQ9UF47 199 aa11.77□□□□□ -0.52
SEC62-201ENST00000337002 TRIM41Q8WV44 630 aa11.76□□□□□ -0.53
SEC62-201ENST00000337002 TOP2AP11388 1531 aaKnown RBP11.76□□□□□ -0.53
SEC62-201ENST00000337002 CADPSQ9ULU8 1353 aa11.73□□□□□ -0.53
SEC62-201ENST00000337002 PDS5BQ9NTI5 1447 aa11.73□□□□□ -0.53
SEC62-201ENST00000337002 PEG3Q9GZU2 1588 aa11.71□□□□□ -0.54
SEC62-201ENST00000337002 WIZO95785 1651 aa11.67□□□□□ -0.54
SEC62-201ENST00000337002 ERCC6Q03468 1493 aa11.67□□□□□ -0.54
SEC62-201ENST00000337002 CCDC88BA6NC98 1476 aa11.65□□□□□ -0.54
SEC62-201ENST00000337002 FAM9AQ8IZU1 332 aaPredicted RBP11.6□□□□□ -0.55
SEC62-201ENST00000337002 CHIC1Q5VXU3 224 aa11.55□□□□□ -0.56
SEC62-201ENST00000337002 CFTRP13569 1480 aa11.54□□□□□ -0.56
SEC62-201ENST00000337002 ABCC8Q09428 1581 aa11.52□□□□□ -0.56
SEC62-201ENST00000337002 WRNQ14191 1432 aaPredicted RBP eCLIP11.52□□□□□ -0.57
SEC62-201ENST00000337002 CEP164Q9UPV0 1460 aa11.52□□□□□ -0.57
SEC62-201ENST00000337002 FANCD2Q9BXW9 1451 aa11.5□□□□□ -0.57
SEC62-201ENST00000337002 LAMC3Q9Y6N6 1575 aa11.49□□□□□ -0.57
SEC62-201ENST00000337002 NESP48681 1621 aa11.4□□□□□ -0.58
SEC62-201ENST00000337002 UBTFP17480 764 aaKnown RBP11.4□□□□□ -0.58
SEC62-201ENST00000337002 MRC2Q9UBG0 1479 aa11.38□□□□□ -0.59
SEC62-201ENST00000337002 CSRNP3Q8WYN3 585 aa11.38□□□□□ -0.59
SEC62-201ENST00000337002 EEA1Q15075 1411 aa11.38□□□□□ -0.59
SEC62-201ENST00000337002 FBLN2P98095 1184 aa11.37□□□□□ -0.59
SEC62-201ENST00000337002 KIF27Q86VH2 1401 aa11.36□□□□□ -0.59
SEC62-201ENST00000337002 SOGA1O94964 1423 aa11.36□□□□□ -0.59
SEC62-201ENST00000337002 CHMP7Q8WUX9 453 aaPredicted RBP11.33□□□□□ -0.6
SEC62-201ENST00000337002 APLP2Q06481 763 aa11.29□□□□□ -0.6
SEC62-201ENST00000337002 EHMT2Q96KQ7 1210 aa11.29□□□□□ -0.6
SEC62-201ENST00000337002 CUX2O14529 1486 aa11.28□□□□□ -0.6
SEC62-201ENST00000337002 IFT140Q96RY7 1462 aa11.27□□□□□ -0.61
SEC62-201ENST00000337002 TOPBP1Q92547 1522 aa11.26□□□□□ -0.61
SEC62-201ENST00000337002 TDRD9Q8NDG6 1382 aaKnown RBP11.26□□□□□ -0.61
SEC62-201ENST00000337002 DNMBPQ6XZF7 1577 aa11.24□□□□□ -0.61
SEC62-201ENST00000337002 FGD5Q6ZNL6 1462 aa11.24□□□□□ -0.61
SEC62-201ENST00000337002 POLA1P09884 1462 aaPredicted RBP11.19□□□□□ -0.62
SEC62-201ENST00000337002 CARMIL1Q5VZK9 1371 aa11.19□□□□□ -0.62
SEC62-201ENST00000337002 RANGAP1P46060 587 aaPredicted RBP11.19□□□□□ -0.62
SEC62-201ENST00000337002 URB2Q14146 1524 aaKnown RBP11.17□□□□□ -0.62
SEC62-201ENST00000337002 GAPVD1Q14C86 1478 aa11.16□□□□□ -0.62
SEC62-201ENST00000337002 GRIN2BQ13224 1484 aa11.15□□□□□ -0.62
SEC62-201ENST00000337002 CUX1P39880 1505 aa11.15□□□□□ -0.62
SEC62-201ENST00000337002 OSCARQ8IYS5 282 aa11.14□□□□□ -0.63
SEC62-201ENST00000337002 RAD54L2Q9Y4B4 1467 aa11.14□□□□□ -0.63
SEC62-201ENST00000337002 TOP2BQ02880 1626 aa11.14□□□□□ -0.63
SEC62-201ENST00000337002 ABCA10Q8WWZ4 1543 aa11.12□□□□□ -0.63
SEC62-201ENST00000337002 ATP1B4Q9UN42 357 aaPredicted RBP11.12□□□□□ -0.63
SEC62-201ENST00000337002 WDR62O43379 1518 aa11.12□□□□□ -0.63
SEC62-201ENST00000337002 AQRO60306 1485 aaKnown RBP eCLIP11.1□□□□□ -0.632e-6■□□□□ 9
SEC62-201ENST00000337002 IGF1RP08069 1367 aa11.09□□□□□ -0.63
SEC62-201ENST00000337002 FHAD1B1AJZ9 1412 aa11.09□□□□□ -0.63
SEC62-201ENST00000337002 GOLGA3Q08378 1498 aa11.09□□□□□ -0.63
SEC62-201ENST00000337002 NPM1P06748 294 aaKnown RBP eCLIP11.09□□□□□ -0.63
SEC62-201ENST00000337002 SYNJ1O43426 1573 aa11.08□□□□□ -0.64
SEC62-201ENST00000337002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.07□□□□□ -0.64
SEC62-201ENST00000337002 HNRNPUL2Q1KMD3 747 aaKnown RBP11.07□□□□□ -0.64
SEC62-201ENST00000337002 RAPGEF2Q9Y4G8 1499 aa11.07□□□□□ -0.64
SEC62-201ENST00000337002 TTBK1Q5TCY1 1321 aaPredicted RBP11.06□□□□□ -0.64
SEC62-201ENST00000337002 LOC105371045A0A1W2PR82 267 aa11.05□□□□□ -0.64
SEC62-201ENST00000337002 CARMIL2Q6F5E8 1435 aa11.04□□□□□ -0.64
SEC62-201ENST00000337002 CDK11AQ9UQ88 783 aaPredicted RBP11.04□□□□□ -0.64
SEC62-201ENST00000337002 MAGI1Q96QZ7 1491 aaPredicted RBP11.04□□□□□ -0.64
SEC62-201ENST00000337002 KIF21AQ7Z4S6 1674 aa11.02□□□□□ -0.65
SEC62-201ENST00000337002 TNIKQ9UKE5 1360 aa11.01□□□□□ -0.65
SEC62-201ENST00000337002 BIVM-ERCC5R4GMW8 1640 aa11.01□□□□□ -0.65
SEC62-201ENST00000337002 PRDM2Q13029 1718 aa11.01□□□□□ -0.65
SEC62-201ENST00000337002 JPH4Q96JJ6 628 aa11□□□□□ -0.65
SEC62-201ENST00000337002 ERICH3Q5RHP9 1530 aa10.99□□□□□ -0.65
SEC62-201ENST00000337002 WDR97A6NE52 1622 aa10.98□□□□□ -0.65
SEC62-201ENST00000337002 ZNF608Q9ULD9 1512 aaPredicted RBP10.98□□□□□ -0.65
SEC62-201ENST00000337002 SYNJ2O15056 1496 aa10.98□□□□□ -0.65
SEC62-201ENST00000337002 SNAPC4Q5SXM2 1469 aa10.97□□□□□ -0.65
SEC62-201ENST00000337002 P3H3Q8IVL6 736 aa10.97□□□□□ -0.65
SEC62-201ENST00000337002 CLIP1P30622 1438 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms