RNA–Protein interactions for RNA: ENST00000336767.5

BRIX1-201, Transcript of BRX1, biogenesis of ribosomes, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRIX1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-201ENST00000336767 NISCHQ9Y2I1 1504 aa36.51■■■■□ 3.44
BRIX1-201ENST00000336767 CCDC180Q9P1Z9 1646 aa31.65■■■□□ 2.66
BRIX1-201ENST00000336767 ZCCHC6Q5VYS8 1495 aaKnown RBP30.79■■■□□ 2.52
BRIX1-201ENST00000336767 SHROOM4Q9ULL8 1493 aa30.29■■■□□ 2.44
BRIX1-201ENST00000336767 DCAF8L2P0C7V8 631 aa30.16■■■□□ 2.42
BRIX1-201ENST00000336767 ABCC9O60706 1549 aa30.15■■■□□ 2.42
BRIX1-201ENST00000336767 DCAF1Q9Y4B6 1507 aa30.15■■■□□ 2.42
BRIX1-201ENST00000336767 MYO15BQ96JP2 1530 aa29.68■■■□□ 2.34
BRIX1-201ENST00000336767 NACADO15069 1562 aa29.54■■■□□ 2.32
BRIX1-201ENST00000336767 SUPT5HO00267 1087 aaKnown RBP29.41■■■□□ 2.3
BRIX1-201ENST00000336767 RB1CC1Q8TDY2 1594 aa29.3■■■□□ 2.28
BRIX1-201ENST00000336767 SCRIBQ14160 1630 aa29.22■■■□□ 2.27
BRIX1-201ENST00000336767 UNC13AQ9UPW8 1703 aa28.71■■■□□ 2.19
BRIX1-201ENST00000336767 RSF1Q96T23 1441 aaPredicted RBP28.59■■■□□ 2.17
BRIX1-201ENST00000336767 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
BRIX1-201ENST00000336767 CHIC1Q5VXU3 224 aa28.48■■■□□ 2.15
BRIX1-201ENST00000336767 PABPN1Q86U42 306 aaKnown RBP eCLIP28.48■■■□□ 2.15
BRIX1-201ENST00000336767 CECR2Q9BXF3 1484 aa28.39■■■□□ 2.14
BRIX1-201ENST00000336767 MROH2BQ7Z745 1585 aa28.28■■■□□ 2.12
BRIX1-201ENST00000336767 BAZ1AQ9NRL2 1556 aaPredicted RBP28.11■■■□□ 2.09
BRIX1-201ENST00000336767 WIZO95785 1651 aa28.1■■■□□ 2.09
BRIX1-201ENST00000336767 SMARCA4P51532 1647 aa27.97■■■□□ 2.07
BRIX1-201ENST00000336767 TOP2AP11388 1531 aaKnown RBP27.75■■■□□ 2.03
BRIX1-201ENST00000336767 EIF4G1Q04637 1599 aaKnown RBP27.62■■■□□ 2.01
BRIX1-201ENST00000336767 PEG3Q9GZU2 1588 aa27.61■■■□□ 2.01
BRIX1-201ENST00000336767 ATAD2BQ9ULI0 1458 aa27.56■■■□□ 2
BRIX1-201ENST00000336767 TRIM41Q8WV44 630 aa27.56■■■□□ 2
BRIX1-201ENST00000336767 SMARCA2P51531 1590 aa27.55■■■□□ 2
BRIX1-201ENST00000336767 CCDC88BA6NC98 1476 aa27.52■■■□□ 2
BRIX1-201ENST00000336767 LOC105371045A0A1W2PR82 267 aa27.46■■□□□ 1.99
BRIX1-201ENST00000336767 BAZ1BQ9UIG0 1483 aaKnown RBP27.38■■□□□ 1.97
BRIX1-201ENST00000336767 NCAPD3P42695 1498 aa27.32■■□□□ 1.96
BRIX1-201ENST00000336767 HMGXB3Q12766 1538 aa27.23■■□□□ 1.95
BRIX1-201ENST00000336767 CC2D2AQ9P2K1 1620 aa27.23■■□□□ 1.95
BRIX1-201ENST00000336767 ABCC8Q09428 1581 aa27.16■■□□□ 1.94
BRIX1-201ENST00000336767 FAM9AQ8IZU1 332 aaPredicted RBP27.14■■□□□ 1.94
BRIX1-201ENST00000336767 WRNQ14191 1432 aaPredicted RBP eCLIP26.85■■□□□ 1.89
BRIX1-201ENST00000336767 PCGF6Q9BYE7 350 aa26.78■■□□□ 1.88
BRIX1-201ENST00000336767 SOGA1O94964 1423 aa26.77■■□□□ 1.88
BRIX1-201ENST00000336767 EHMT2Q96KQ7 1210 aa26.77■■□□□ 1.88
BRIX1-201ENST00000336767 SYNJ1O43426 1573 aa26.77■■□□□ 1.88
BRIX1-201ENST00000336767 DNAJC5BQ9UF47 199 aa26.75■■□□□ 1.87
BRIX1-201ENST00000336767 EEA1Q15075 1411 aa26.73■■□□□ 1.87
BRIX1-201ENST00000336767 CFTRP13569 1480 aa26.7■■□□□ 1.87
BRIX1-201ENST00000336767 RUSC2Q8N2Y8 1516 aa26.67■■□□□ 1.86
BRIX1-201ENST00000336767 CADPSQ9ULU8 1353 aa26.63■■□□□ 1.85
BRIX1-201ENST00000336767 TRIM26Q12899 539 aaPredicted RBP26.59■■□□□ 1.85
BRIX1-201ENST00000336767 CSRNP3Q8WYN3 585 aa26.59■■□□□ 1.85
BRIX1-201ENST00000336767 TOP2BQ02880 1626 aa26.57■■□□□ 1.84
BRIX1-201ENST00000336767 BIVM-ERCC5R4GMW8 1640 aa26.55■■□□□ 1.84
BRIX1-201ENST00000336767 HRCP23327 699 aa26.5■■□□□ 1.83
BRIX1-201ENST00000336767 TNIKQ9UKE5 1360 aa26.48■■□□□ 1.83
BRIX1-201ENST00000336767 NESP48681 1621 aa26.47■■□□□ 1.83
BRIX1-201ENST00000336767 PRDM2Q13029 1718 aa26.46■■□□□ 1.83
BRIX1-201ENST00000336767 GOLGA3Q08378 1498 aa26.43■■□□□ 1.82
BRIX1-201ENST00000336767 KIF21BO75037 1637 aa26.41■■□□□ 1.82
BRIX1-201ENST00000336767 CUX1P39880 1505 aa26.4■■□□□ 1.82
BRIX1-201ENST00000336767 CEP162Q5TB80 1403 aa26.39■■□□□ 1.82
BRIX1-201ENST00000336767 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
BRIX1-201ENST00000336767 LAMC3Q9Y6N6 1575 aa26.35■■□□□ 1.81
BRIX1-201ENST00000336767 FANCD2Q9BXW9 1451 aa26.34■■□□□ 1.81
BRIX1-201ENST00000336767 UBTFP17480 764 aaKnown RBP26.29■■□□□ 1.8
BRIX1-201ENST00000336767 RAPGEF2Q9Y4G8 1499 aa26.19■■□□□ 1.78
BRIX1-201ENST00000336767 PDS5BQ9NTI5 1447 aa26.18■■□□□ 1.78
BRIX1-201ENST00000336767 PPARGC1BQ86YN6 1023 aaKnown RBP26.12■■□□□ 1.77
BRIX1-201ENST00000336767 PRXQ9BXM0 1461 aa26.11■■□□□ 1.77
BRIX1-201ENST00000336767 KIF27Q86VH2 1401 aa26.1■■□□□ 1.77
BRIX1-201ENST00000336767 ERICH3Q5RHP9 1530 aa26.1■■□□□ 1.77
BRIX1-201ENST00000336767 KIF21AQ7Z4S6 1674 aa26.06■■□□□ 1.76
BRIX1-201ENST00000336767 CLIP1P30622 1438 aa26.05■■□□□ 1.76
BRIX1-201ENST00000336767 DNMBPQ6XZF7 1577 aa26.04■■□□□ 1.76
BRIX1-201ENST00000336767 TOPBP1Q92547 1522 aa26.04■■□□□ 1.76
BRIX1-201ENST00000336767 FGD5Q6ZNL6 1462 aa26.03■■□□□ 1.76
BRIX1-201ENST00000336767 URB2Q14146 1524 aaKnown RBP26.03■■□□□ 1.76
BRIX1-201ENST00000336767 CUX2O14529 1486 aa25.93■■□□□ 1.74
BRIX1-201ENST00000336767 POLA1P09884 1462 aaPredicted RBP25.92■■□□□ 1.74
BRIX1-201ENST00000336767 VPS8Q8N3P4 1428 aa25.9■■□□□ 1.74
BRIX1-201ENST00000336767 RAD54L2Q9Y4B4 1467 aa25.88■■□□□ 1.73
BRIX1-201ENST00000336767 MRC2Q9UBG0 1479 aa25.86■■□□□ 1.73
BRIX1-201ENST00000336767 IGF1RP08069 1367 aa25.86■■□□□ 1.73
BRIX1-201ENST00000336767 ERCC6Q03468 1493 aa25.81■■□□□ 1.72
BRIX1-201ENST00000336767 ZEB1P37275 1124 aaPredicted RBP25.78■■□□□ 1.72
BRIX1-201ENST00000336767 ABCA10Q8WWZ4 1543 aa25.77■■□□□ 1.72
BRIX1-201ENST00000336767 TTBK1Q5TCY1 1321 aaPredicted RBP25.77■■□□□ 1.72
BRIX1-201ENST00000336767 ARAP1Q96P48 1450 aa25.76■■□□□ 1.71
BRIX1-201ENST00000336767 RANGAP1P46060 587 aaPredicted RBP25.75■■□□□ 1.71
BRIX1-201ENST00000336767 WDR62O43379 1518 aa25.72■■□□□ 1.71
BRIX1-201ENST00000336767 CARMIL1Q5VZK9 1371 aa25.72■■□□□ 1.71
BRIX1-201ENST00000336767 THOC2Q8NI27 1593 aaKnown RBP25.66■■□□□ 1.7
BRIX1-201ENST00000336767 WDR97A6NE52 1622 aa25.66■■□□□ 1.7
BRIX1-201ENST00000336767 TDRD9Q8NDG6 1382 aaKnown RBP25.64■■□□□ 1.7
BRIX1-201ENST00000336767 TARBP1Q13395 1621 aaKnown RBP25.64■■□□□ 1.7
BRIX1-201ENST00000336767 ARHGAP35Q9NRY4 1499 aa25.63■■□□□ 1.69
BRIX1-201ENST00000336767 APLP2Q06481 763 aa25.6■■□□□ 1.69
BRIX1-201ENST00000336767 ABCA5Q8WWZ7 1642 aa25.56■■□□□ 1.68
BRIX1-201ENST00000336767 CUL7Q14999 1698 aa25.56■■□□□ 1.68
BRIX1-201ENST00000336767 GAPVD1Q14C86 1478 aa25.53■■□□□ 1.68
BRIX1-201ENST00000336767 IFT140Q96RY7 1462 aa25.52■■□□□ 1.68
BRIX1-201ENST00000336767 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.51■■□□□ 1.67
BRIX1-201ENST00000336767 AQRO60306 1485 aaKnown RBP eCLIP25.48■■□□□ 1.676e-7■■■□□ 16.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms