RNA–Protein interactions for RNA: ENST00000331941.6

CSF3R-201, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 5 BASIC

Gene CSF3R, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-201ENST00000331941 NISCHQ9Y2I1 1504 aa25.04■■□□□ 1.6
CSF3R-201ENST00000331941 SHROOM4Q9ULL8 1493 aa21.81■■□□□ 1.08
CSF3R-201ENST00000331941 CCDC180Q9P1Z9 1646 aa21.67■■□□□ 1.06
CSF3R-201ENST00000331941 PELP1Q8IZL8 1130 aaKnown RBP21.62■■□□□ 1.05
CSF3R-201ENST00000331941 HRCP23327 699 aa21.6■■□□□ 1.05
CSF3R-201ENST00000331941 SUPT5HO00267 1087 aaKnown RBP21.58■■□□□ 1.04
CSF3R-201ENST00000331941 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
CSF3R-201ENST00000331941 MYO15BQ96JP2 1530 aa21.23■□□□□ 0.99
CSF3R-201ENST00000331941 CHIC1Q5VXU3 224 aa21.15■□□□□ 0.98
CSF3R-201ENST00000331941 PCGF6Q9BYE7 350 aa20.98■□□□□ 0.95
CSF3R-201ENST00000331941 PPARGC1BQ86YN6 1023 aaKnown RBP20.97■□□□□ 0.95
CSF3R-201ENST00000331941 MYT1Q01538 1121 aa20.96■□□□□ 0.95
CSF3R-201ENST00000331941 ABCC9O60706 1549 aa20.8■□□□□ 0.92
CSF3R-201ENST00000331941 DCAF8L2P0C7V8 631 aa20.76■□□□□ 0.91
CSF3R-201ENST00000331941 DCAF1Q9Y4B6 1507 aa20.69■□□□□ 0.9
CSF3R-201ENST00000331941 SCAF1Q9H7N4 1312 aaKnown RBP20.63■□□□□ 0.89
CSF3R-201ENST00000331941 LOC105371045A0A1W2PR82 267 aa20.61■□□□□ 0.89
CSF3R-201ENST00000331941 TRIM26Q12899 539 aaPredicted RBP20.42■□□□□ 0.86
CSF3R-201ENST00000331941 ZEB1P37275 1124 aaPredicted RBP20.19■□□□□ 0.82
CSF3R-201ENST00000331941 NACADO15069 1562 aa20.05■□□□□ 0.8
CSF3R-201ENST00000331941 ACIN1Q9UKV3 1341 aaKnown RBP20.02■□□□□ 0.8
CSF3R-201ENST00000331941 RSF1Q96T23 1441 aaPredicted RBP20.02■□□□□ 0.8
CSF3R-201ENST00000331941 TRIM41Q8WV44 630 aa20■□□□□ 0.79
CSF3R-201ENST00000331941 FAM9AQ8IZU1 332 aaPredicted RBP19.94■□□□□ 0.78
CSF3R-201ENST00000331941 RB1CC1Q8TDY2 1594 aa19.93■□□□□ 0.78
CSF3R-201ENST00000331941 SCRIBQ14160 1630 aa19.89■□□□□ 0.77
CSF3R-201ENST00000331941 NEUROD1Q13562 356 aa19.88■□□□□ 0.77
CSF3R-201ENST00000331941 TTBK1Q5TCY1 1321 aaPredicted RBP19.84■□□□□ 0.77
CSF3R-201ENST00000331941 EHMT2Q96KQ7 1210 aa19.82■□□□□ 0.76
CSF3R-201ENST00000331941 GTF3C3Q9Y5Q9 886 aa19.81■□□□□ 0.76
CSF3R-201ENST00000331941 CENPBP07199 599 aaPredicted RBP19.7■□□□□ 0.74
CSF3R-201ENST00000331941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.58■□□□□ 0.72
CSF3R-201ENST00000331941 CECR2Q9BXF3 1484 aa19.58■□□□□ 0.72
CSF3R-201ENST00000331941 MROH2BQ7Z745 1585 aa19.54■□□□□ 0.72
CSF3R-201ENST00000331941 CCER1Q8TC90 406 aaPredicted RBP19.51■□□□□ 0.71
CSF3R-201ENST00000331941 UNC13AQ9UPW8 1703 aa19.49■□□□□ 0.71
CSF3R-201ENST00000331941 WIZO95785 1651 aa19.46■□□□□ 0.71
CSF3R-201ENST00000331941 PABPN1Q86U42 306 aaKnown RBP eCLIP19.4■□□□□ 0.74e-7■■□□□ 12.2
CSF3R-201ENST00000331941 DIEXFQ68CQ4 756 aaKnown RBP19.39■□□□□ 0.69
CSF3R-201ENST00000331941 BCL11AQ9H165 835 aa19.39■□□□□ 0.69
CSF3R-201ENST00000331941 EIF4G1Q04637 1599 aaKnown RBP19.36■□□□□ 0.69
CSF3R-201ENST00000331941 DNAJC5BQ9UF47 199 aa19.35■□□□□ 0.69
CSF3R-201ENST00000331941 BICRAQ9NZM4 1560 aa19.34■□□□□ 0.69
CSF3R-201ENST00000331941 BAZ1AQ9NRL2 1556 aaPredicted RBP19.31■□□□□ 0.68
CSF3R-201ENST00000331941 WRNQ14191 1432 aaPredicted RBP eCLIP19.27■□□□□ 0.67
CSF3R-201ENST00000331941 ABCC8Q09428 1581 aa19.21■□□□□ 0.67
CSF3R-201ENST00000331941 CCDC88BA6NC98 1476 aa19.21■□□□□ 0.67
CSF3R-201ENST00000331941 CEP162Q5TB80 1403 aa19.2■□□□□ 0.66
CSF3R-201ENST00000331941 ANP32EQ9BTT0 268 aa19.14■□□□□ 0.66
CSF3R-201ENST00000331941 SOGA1O94964 1423 aa19.12■□□□□ 0.65
CSF3R-201ENST00000331941 TNIKQ9UKE5 1360 aa19.11■□□□□ 0.65
CSF3R-201ENST00000331941 ZNF316A6NFI3 1004 aaPredicted RBP19.11■□□□□ 0.65
CSF3R-201ENST00000331941 SMARCA4P51532 1647 aa19.09■□□□□ 0.65
CSF3R-201ENST00000331941 TOP2AP11388 1531 aaKnown RBP19.09■□□□□ 0.65
CSF3R-201ENST00000331941 SMARCA2P51531 1590 aa19.03■□□□□ 0.64
CSF3R-201ENST00000331941 RUSC2Q8N2Y8 1516 aa19.02■□□□□ 0.64
CSF3R-201ENST00000331941 CSRNP3Q8WYN3 585 aa19.01■□□□□ 0.63
CSF3R-201ENST00000331941 UBTFP17480 764 aaKnown RBP19■□□□□ 0.63
CSF3R-201ENST00000331941 YTHDC1Q96MU7 727 aaKnown RBP19■□□□□ 0.63
CSF3R-201ENST00000331941 EEA1Q15075 1411 aa18.97■□□□□ 0.63
CSF3R-201ENST00000331941 PRKCSHP14314 528 aaPredicted RBP18.94■□□□□ 0.62
CSF3R-201ENST00000331941 MIER1Q8N108 512 aa18.94■□□□□ 0.62
CSF3R-201ENST00000331941 GOLGA3Q08378 1498 aa18.91■□□□□ 0.62
CSF3R-201ENST00000331941 CLSPNQ9HAW4 1339 aa18.91■□□□□ 0.62
CSF3R-201ENST00000331941 PEG3Q9GZU2 1588 aa18.91■□□□□ 0.62
CSF3R-201ENST00000331941 HNRNPUL2Q1KMD3 747 aaKnown RBP18.89■□□□□ 0.61
CSF3R-201ENST00000331941 TSHZ2Q9NRE2 1034 aa18.85■□□□□ 0.61
CSF3R-201ENST00000331941 CC2D2AQ9P2K1 1620 aa18.83■□□□□ 0.61
CSF3R-201ENST00000331941 SUPT16HQ9Y5B9 1047 aaKnown RBP18.8■□□□□ 0.6
CSF3R-201ENST00000331941 CEP164Q9UPV0 1460 aa18.75■□□□□ 0.59
CSF3R-201ENST00000331941 CLIP1P30622 1438 aa18.75■□□□□ 0.59
CSF3R-201ENST00000331941 KIF21BO75037 1637 aa18.73■□□□□ 0.59
CSF3R-201ENST00000331941 VPS8Q8N3P4 1428 aa18.7■□□□□ 0.58
CSF3R-201ENST00000331941 SYNJ1O43426 1573 aa18.7■□□□□ 0.58
CSF3R-201ENST00000331941 ATAD2BQ9ULI0 1458 aa18.65■□□□□ 0.58
CSF3R-201ENST00000331941 APLP2Q06481 763 aa18.63■□□□□ 0.57
CSF3R-201ENST00000331941 ERICH6Q7L0X2 663 aa18.62■□□□□ 0.57
CSF3R-201ENST00000331941 RAPGEF2Q9Y4G8 1499 aa18.61■□□□□ 0.57
CSF3R-201ENST00000331941 BAZ1BQ9UIG0 1483 aaKnown RBP18.6■□□□□ 0.57
CSF3R-201ENST00000331941 RANGAP1P46060 587 aaPredicted RBP18.6■□□□□ 0.57
CSF3R-201ENST00000331941 DHX57Q6P158 1386 aaKnown RBP18.54■□□□□ 0.56
CSF3R-201ENST00000331941 HMGXB3Q12766 1538 aa18.51■□□□□ 0.55
CSF3R-201ENST00000331941 NCAPD3P42695 1498 aa18.46■□□□□ 0.55
CSF3R-201ENST00000331941 KANK4Q5T7N3 995 aaPredicted RBP18.42■□□□□ 0.54
CSF3R-201ENST00000331941 ARAP1Q96P48 1450 aa18.4■□□□□ 0.54
CSF3R-201ENST00000331941 TOP2BQ02880 1626 aa18.38■□□□□ 0.53
CSF3R-201ENST00000331941 RBM19Q9Y4C8 960 aaKnown RBP18.35■□□□□ 0.53
CSF3R-201ENST00000331941 PRXQ9BXM0 1461 aa18.34■□□□□ 0.53
CSF3R-201ENST00000331941 ERICH3Q5RHP9 1530 aa18.33■□□□□ 0.53
CSF3R-201ENST00000331941 RRBP1Q9P2E9 1410 aaKnown RBP18.33■□□□□ 0.53
CSF3R-201ENST00000331941 CUX2O14529 1486 aa18.29■□□□□ 0.52
CSF3R-201ENST00000331941 BIVM-ERCC5R4GMW8 1640 aa18.29■□□□□ 0.52
CSF3R-201ENST00000331941 KCNH8Q96L42 1107 aa18.28■□□□□ 0.52
CSF3R-201ENST00000331941 CCNB3Q8WWL7 1395 aa18.25■□□□□ 0.51
CSF3R-201ENST00000331941 MSH5O43196 834 aa18.23■□□□□ 0.51
CSF3R-201ENST00000331941 ITGAEP38570 1179 aa18.23■□□□□ 0.51
CSF3R-201ENST00000331941 PRDM2Q13029 1718 aa18.22■□□□□ 0.51
CSF3R-201ENST00000331941 MYT1LQ9UL68 1186 aa18.2■□□□□ 0.5
CSF3R-201ENST00000331941 BCANQ96GW7 911 aa18.19■□□□□ 0.5
CSF3R-201ENST00000331941 MAPKBP1O60336 1514 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms