RNA–Protein interactions for RNA: ENST00000331302.11

RPH3AL-202, Transcript of rabphilin 3A like (without C2 domains), humanhuman

APPRIS P2 TSL 2 BASIC

Gene RPH3AL, Length 2,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-202ENST00000331302 NISCHQ9Y2I1 1504 aa32.77■■■□□ 2.84
RPH3AL-202ENST00000331302 CCDC180Q9P1Z9 1646 aa28.22■■■□□ 2.11
RPH3AL-202ENST00000331302 ZCCHC6Q5VYS8 1495 aaKnown RBP27.69■■■□□ 2.02
RPH3AL-202ENST00000331302 SHROOM4Q9ULL8 1493 aa27.41■■□□□ 1.98
RPH3AL-202ENST00000331302 DCAF8L2P0C7V8 631 aa27.15■■□□□ 1.94
RPH3AL-202ENST00000331302 DCAF1Q9Y4B6 1507 aa27.07■■□□□ 1.92
RPH3AL-202ENST00000331302 SUPT5HO00267 1087 aaKnown RBP26.68■■□□□ 1.86
RPH3AL-202ENST00000331302 MYO15BQ96JP2 1530 aa26.46■■□□□ 1.83
RPH3AL-202ENST00000331302 SCRIBQ14160 1630 aa26.1■■□□□ 1.77
RPH3AL-202ENST00000331302 NACADO15069 1562 aa26.09■■□□□ 1.77
RPH3AL-202ENST00000331302 ABCC9O60706 1549 aa26.07■■□□□ 1.76
RPH3AL-202ENST00000331302 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
RPH3AL-202ENST00000331302 RSF1Q96T23 1441 aaPredicted RBP25.71■■□□□ 1.71
RPH3AL-202ENST00000331302 RB1CC1Q8TDY2 1594 aa25.7■■□□□ 1.7
RPH3AL-202ENST00000331302 CECR2Q9BXF3 1484 aa25.44■■□□□ 1.66
RPH3AL-202ENST00000331302 MROH2BQ7Z745 1585 aa25.38■■□□□ 1.65
RPH3AL-202ENST00000331302 UNC13AQ9UPW8 1703 aa25.34■■□□□ 1.65
RPH3AL-202ENST00000331302 WIZO95785 1651 aa25.24■■□□□ 1.63
RPH3AL-202ENST00000331302 BAZ1AQ9NRL2 1556 aaPredicted RBP25.22■■□□□ 1.63
RPH3AL-202ENST00000331302 SMARCA4P51532 1647 aa25.05■■□□□ 1.6
RPH3AL-202ENST00000331302 LOC105371045A0A1W2PR82 267 aa25■■□□□ 1.59
RPH3AL-202ENST00000331302 BICRAQ9NZM4 1560 aa24.99■■□□□ 1.59
RPH3AL-202ENST00000331302 TOP2AP11388 1531 aaKnown RBP24.94■■□□□ 1.58
RPH3AL-202ENST00000331302 TRIM41Q8WV44 630 aa24.91■■□□□ 1.58
RPH3AL-202ENST00000331302 EIF4G1Q04637 1599 aaKnown RBP24.89■■□□□ 1.58
RPH3AL-202ENST00000331302 PABPN1Q86U42 306 aaKnown RBP eCLIP24.86■■□□□ 1.57
RPH3AL-202ENST00000331302 EHMT2Q96KQ7 1210 aa24.82■■□□□ 1.56
RPH3AL-202ENST00000331302 FAM9AQ8IZU1 332 aaPredicted RBP24.77■■□□□ 1.56
RPH3AL-202ENST00000331302 SMARCA2P51531 1590 aa24.76■■□□□ 1.55
RPH3AL-202ENST00000331302 CCDC88BA6NC98 1476 aa24.71■■□□□ 1.55
RPH3AL-202ENST00000331302 PEG3Q9GZU2 1588 aa24.71■■□□□ 1.55
RPH3AL-202ENST00000331302 PCGF6Q9BYE7 350 aa24.52■■□□□ 1.52
RPH3AL-202ENST00000331302 ABCC8Q09428 1581 aa24.46■■□□□ 1.51
RPH3AL-202ENST00000331302 ATAD2BQ9ULI0 1458 aa24.44■■□□□ 1.5
RPH3AL-202ENST00000331302 HRCP23327 699 aa24.43■■□□□ 1.5
RPH3AL-202ENST00000331302 BAZ1BQ9UIG0 1483 aaKnown RBP24.33■■□□□ 1.48
RPH3AL-202ENST00000331302 TRIM26Q12899 539 aaPredicted RBP24.31■■□□□ 1.48
RPH3AL-202ENST00000331302 EEA1Q15075 1411 aa24.17■■□□□ 1.46
RPH3AL-202ENST00000331302 WRNQ14191 1432 aaPredicted RBP eCLIP24.15■■□□□ 1.46
RPH3AL-202ENST00000331302 SOGA1O94964 1423 aa24.14■■□□□ 1.45
RPH3AL-202ENST00000331302 HMGXB3Q12766 1538 aa24.12■■□□□ 1.45
RPH3AL-202ENST00000331302 PPARGC1BQ86YN6 1023 aaKnown RBP24.1■■□□□ 1.45
RPH3AL-202ENST00000331302 SYNJ1O43426 1573 aa24.09■■□□□ 1.45
RPH3AL-202ENST00000331302 NCAPD3P42695 1498 aa24.08■■□□□ 1.45
RPH3AL-202ENST00000331302 RUSC2Q8N2Y8 1516 aa24.03■■□□□ 1.44
RPH3AL-202ENST00000331302 CSRNP3Q8WYN3 585 aa23.98■■□□□ 1.43
RPH3AL-202ENST00000331302 TNIKQ9UKE5 1360 aa23.97■■□□□ 1.43
RPH3AL-202ENST00000331302 CEP162Q5TB80 1403 aa23.91■■□□□ 1.42
RPH3AL-202ENST00000331302 TOP2BQ02880 1626 aa23.91■■□□□ 1.42
RPH3AL-202ENST00000331302 GOLGA3Q08378 1498 aa23.89■■□□□ 1.42
RPH3AL-202ENST00000331302 BIVM-ERCC5R4GMW8 1640 aa23.88■■□□□ 1.41
RPH3AL-202ENST00000331302 KIF21BO75037 1637 aa23.88■■□□□ 1.41
RPH3AL-202ENST00000331302 TTBK1Q5TCY1 1321 aaPredicted RBP23.84■■□□□ 1.41
RPH3AL-202ENST00000331302 CEP164Q9UPV0 1460 aa23.81■■□□□ 1.4
RPH3AL-202ENST00000331302 CFTRP13569 1480 aa23.77■■□□□ 1.4
RPH3AL-202ENST00000331302 PRDM2Q13029 1718 aa23.75■■□□□ 1.39
RPH3AL-202ENST00000331302 UBTFP17480 764 aaKnown RBP23.73■■□□□ 1.39
RPH3AL-202ENST00000331302 ZEB1P37275 1124 aaPredicted RBP23.68■■□□□ 1.38
RPH3AL-202ENST00000331302 CUX1P39880 1505 aa23.68■■□□□ 1.38
RPH3AL-202ENST00000331302 RANGAP1P46060 587 aaPredicted RBP23.63■■□□□ 1.37
RPH3AL-202ENST00000331302 CC2D2AQ9P2K1 1620 aa23.61■■□□□ 1.37
RPH3AL-202ENST00000331302 RAPGEF2Q9Y4G8 1499 aa23.61■■□□□ 1.37
RPH3AL-202ENST00000331302 ERICH3Q5RHP9 1530 aa23.56■■□□□ 1.36
RPH3AL-202ENST00000331302 CLIP1P30622 1438 aa23.54■■□□□ 1.36
RPH3AL-202ENST00000331302 PRXQ9BXM0 1461 aa23.53■■□□□ 1.36
RPH3AL-202ENST00000331302 CADPSQ9ULU8 1353 aa23.51■■□□□ 1.35
RPH3AL-202ENST00000331302 KIF27Q86VH2 1401 aa23.46■■□□□ 1.35
RPH3AL-202ENST00000331302 VPS8Q8N3P4 1428 aa23.45■■□□□ 1.34
RPH3AL-202ENST00000331302 FGD5Q6ZNL6 1462 aa23.28■■□□□ 1.32
RPH3AL-202ENST00000331302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.28■■□□□ 1.32
RPH3AL-202ENST00000331302 FANCD2Q9BXW9 1451 aa23.28■■□□□ 1.32
RPH3AL-202ENST00000331302 ARAP1Q96P48 1450 aa23.26■■□□□ 1.31
RPH3AL-202ENST00000331302 CUX2O14529 1486 aa23.26■■□□□ 1.31
RPH3AL-202ENST00000331302 CCER1Q8TC90 406 aaPredicted RBP23.22■■□□□ 1.31
RPH3AL-202ENST00000331302 DNMBPQ6XZF7 1577 aa23.21■■□□□ 1.31
RPH3AL-202ENST00000331302 IGF1RP08069 1367 aa23.21■■□□□ 1.31
RPH3AL-202ENST00000331302 PELP1Q8IZL8 1130 aaKnown RBP23.19■■□□□ 1.3
RPH3AL-202ENST00000331302 APLP2Q06481 763 aa23.16■■□□□ 1.3
RPH3AL-202ENST00000331302 LAMC3Q9Y6N6 1575 aa23.15■■□□□ 1.3
RPH3AL-202ENST00000331302 DNAJC5BQ9UF47 199 aa23.14■■□□□ 1.3
RPH3AL-202ENST00000331302 NESP48681 1621 aa23.13■■□□□ 1.29
RPH3AL-202ENST00000331302 TOPBP1Q92547 1522 aa23.12■■□□□ 1.29
RPH3AL-202ENST00000331302 ARHGAP35Q9NRY4 1499 aa23.11■■□□□ 1.29
RPH3AL-202ENST00000331302 CARMIL1Q5VZK9 1371 aa23.09■■□□□ 1.29
RPH3AL-202ENST00000331302 ABCA10Q8WWZ4 1543 aa23.09■■□□□ 1.29
RPH3AL-202ENST00000331302 POLA1P09884 1462 aaPredicted RBP23.07■■□□□ 1.28
RPH3AL-202ENST00000331302 RAD54L2Q9Y4B4 1467 aa23.01■■□□□ 1.27
RPH3AL-202ENST00000331302 WDR97A6NE52 1622 aa23■■□□□ 1.27
RPH3AL-202ENST00000331302 HNRNPUL2Q1KMD3 747 aaKnown RBP22.98■■□□□ 1.27
RPH3AL-202ENST00000331302 URB2Q14146 1524 aaKnown RBP22.98■■□□□ 1.27
RPH3AL-202ENST00000331302 CUL7Q14999 1698 aa22.97■■□□□ 1.27
RPH3AL-202ENST00000331302 KANK4Q5T7N3 995 aaPredicted RBP22.93■■□□□ 1.26
RPH3AL-202ENST00000331302 MAP3K1Q13233 1512 aa22.91■■□□□ 1.26
RPH3AL-202ENST00000331302 PDS5BQ9NTI5 1447 aa22.91■■□□□ 1.26
RPH3AL-202ENST00000331302 KIF21AQ7Z4S6 1674 aa22.89■■□□□ 1.25
RPH3AL-202ENST00000331302 RRBP1Q9P2E9 1410 aaKnown RBP22.89■■□□□ 1.25
RPH3AL-202ENST00000331302 ABCA5Q8WWZ7 1642 aa22.87■■□□□ 1.25
RPH3AL-202ENST00000331302 CTTNBP2Q8WZ74 1663 aa22.86■■□□□ 1.25
RPH3AL-202ENST00000331302 TIAM1Q13009 1591 aa22.85■■□□□ 1.25
RPH3AL-202ENST00000331302 EFCAB5A4FU69 1503 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms