RNA–Protein interactions for RNA: ENST00000330276.4

SV2B-201, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SV2B, Length 11,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-201ENST00000330276 PELP1Q8IZL8 1130 aaKnown RBP9.79□□□□□ -0.84
SV2B-201ENST00000330276 MYT1Q01538 1121 aa9.72□□□□□ -0.85
SV2B-201ENST00000330276 ERICH6Q7L0X2 663 aa9.4□□□□□ -0.9
SV2B-201ENST00000330276 DCAF8L2P0C7V8 631 aa9.35□□□□□ -0.91
SV2B-201ENST00000330276 CCER1Q8TC90 406 aaPredicted RBP9.28□□□□□ -0.92
SV2B-201ENST00000330276 TTBK1Q5TCY1 1321 aaPredicted RBP9.18□□□□□ -0.94
SV2B-201ENST00000330276 CENPBP07199 599 aaPredicted RBP9.18□□□□□ -0.94
SV2B-201ENST00000330276 EHMT2Q96KQ7 1210 aa9.11□□□□□ -0.95
SV2B-201ENST00000330276 YTHDC1Q96MU7 727 aaKnown RBP9.02□□□□□ -0.97
SV2B-201ENST00000330276 SUPT5HO00267 1087 aaKnown RBP9.01□□□□□ -0.97
SV2B-201ENST00000330276 PCGF6Q9BYE7 350 aa8.98□□□□□ -0.97
SV2B-201ENST00000330276 NEFLP07196 543 aa8.95□□□□□ -0.98
SV2B-201ENST00000330276 ZEB1P37275 1124 aaPredicted RBP8.88□□□□□ -0.99
SV2B-201ENST00000330276 DAXXQ9UER7 740 aaPredicted RBP8.81□□□□□ -1
SV2B-201ENST00000330276 APLP2Q06481 763 aa8.75□□□□□ -1.01
SV2B-201ENST00000330276 SHROOM4Q9ULL8 1493 aa8.75□□□□□ -1.01
SV2B-201ENST00000330276 RTL5Q5HYW3 569 aaPredicted RBP8.75□□□□□ -1.01
SV2B-201ENST00000330276 FAM9AQ8IZU1 332 aaPredicted RBP8.61□□□□□ -1.03
SV2B-201ENST00000330276 ZNF316A6NFI3 1004 aaPredicted RBP8.6□□□□□ -1.03
SV2B-201ENST00000330276 GLIPR1L2Q4G1C9 344 aa8.58□□□□□ -1.04
SV2B-201ENST00000330276 HRCP23327 699 aa8.56□□□□□ -1.04
SV2B-201ENST00000330276 NISCHQ9Y2I1 1504 aa8.56□□□□□ -1.04
SV2B-201ENST00000330276 EIF5BO60841 1220 aaKnown RBP8.55□□□□□ -1.04
SV2B-201ENST00000330276 RANGAP1P46060 587 aaPredicted RBP8.51□□□□□ -1.05
SV2B-201ENST00000330276 PPARGC1BQ86YN6 1023 aaKnown RBP8.45□□□□□ -1.06
SV2B-201ENST00000330276 GTF3C3Q9Y5Q9 886 aa8.45□□□□□ -1.06
SV2B-201ENST00000330276 BCANQ96GW7 911 aa8.41□□□□□ -1.06
SV2B-201ENST00000330276 CLSPNQ9HAW4 1339 aa8.39□□□□□ -1.07
SV2B-201ENST00000330276 TRIM26Q12899 539 aaPredicted RBP8.39□□□□□ -1.07
SV2B-201ENST00000330276 DIEXFQ68CQ4 756 aaKnown RBP8.37□□□□□ -1.07
SV2B-201ENST00000330276 ATP1B4Q9UN42 357 aaPredicted RBP8.36□□□□□ -1.07
SV2B-201ENST00000330276 CNGB1Q14028 1251 aaPredicted RBP8.36□□□□□ -1.07
SV2B-201ENST00000330276 CDK11AQ9UQ88 783 aaPredicted RBP8.35□□□□□ -1.07
SV2B-201ENST00000330276 POLR3GLQ9BT43 218 aa8.33□□□□□ -1.08
SV2B-201ENST00000330276 MYT1LQ9UL68 1186 aa8.31□□□□□ -1.08
SV2B-201ENST00000330276 ANP32AP39687 249 aaKnown RBP8.26□□□□□ -1.09
SV2B-201ENST00000330276 TRIM41Q8WV44 630 aa8.24□□□□□ -1.09
SV2B-201ENST00000330276 UBTFP17480 764 aaKnown RBP8.24□□□□□ -1.09
SV2B-201ENST00000330276 ANP32BQ92688 251 aaKnown RBP8.24□□□□□ -1.09
SV2B-201ENST00000330276 ACIN1Q9UKV3 1341 aaKnown RBP8.23□□□□□ -1.09
SV2B-201ENST00000330276 NBR1Q14596 966 aa8.22□□□□□ -1.09
SV2B-201ENST00000330276 NPM2Q86SE8 214 aaKnown RBP8.21□□□□□ -1.1
SV2B-201ENST00000330276 TNNT2P45379 298 aaPredicted RBP8.2□□□□□ -1.1
SV2B-201ENST00000330276 ITGAEP38570 1179 aa8.17□□□□□ -1.1
SV2B-201ENST00000330276 CHIC1Q5VXU3 224 aa8.17□□□□□ -1.1
SV2B-201ENST00000330276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.16□□□□□ -1.1
SV2B-201ENST00000330276 BCL11AQ9H165 835 aa8.13□□□□□ -1.11
SV2B-201ENST00000330276 ARXQ96QS3 562 aa8.13□□□□□ -1.11
SV2B-201ENST00000330276 HNRNPUL2Q1KMD3 747 aaKnown RBP8.12□□□□□ -1.11
SV2B-201ENST00000330276 CDK11BP21127 795 aaKnown RBP8.09□□□□□ -1.11
SV2B-201ENST00000330276 SLC4A1APQ9BWU0 796 aaKnown RBP8.09□□□□□ -1.11
SV2B-201ENST00000330276 ZBTB47Q9UFB7 747 aaPredicted RBP8.08□□□□□ -1.12
SV2B-201ENST00000330276 SCAF1Q9H7N4 1312 aaKnown RBP8.08□□□□□ -1.12
SV2B-201ENST00000330276 LOC105371045A0A1W2PR82 267 aa8.07□□□□□ -1.12
SV2B-201ENST00000330276 ANP32CO43423 234 aa8.06□□□□□ -1.12
SV2B-201ENST00000330276 RTN4Q9NQC3 1192 aaKnown RBP8.05□□□□□ -1.12
SV2B-201ENST00000330276 AMER1Q5JTC6 1135 aaPredicted RBP8.04□□□□□ -1.12
SV2B-201ENST00000330276 ANP32EQ9BTT0 268 aa8.04□□□□□ -1.12
SV2B-201ENST00000330276 CANXP27824 592 aaKnown RBP8.04□□□□□ -1.12
SV2B-201ENST00000330276 FKBP8Q14318 412 aa8.04□□□□□ -1.12
SV2B-201ENST00000330276 HSP90AA1P07900 732 aaKnown RBP8.03□□□□□ -1.12
SV2B-201ENST00000330276 NAP1L5Q96NT1 182 aaPredicted RBP8.01□□□□□ -1.13
SV2B-201ENST00000330276 TRIM44Q96DX7 344 aaPredicted RBP8□□□□□ -1.13
SV2B-201ENST00000330276 NCLP19338 710 aaKnown RBP8□□□□□ -1.13
SV2B-201ENST00000330276 ERICH6BQ5W0A0 696 aa7.96□□□□□ -1.13
SV2B-201ENST00000330276 NEUROD1Q13562 356 aa7.96□□□□□ -1.13
SV2B-201ENST00000330276 UPF2Q9HAU5 1272 aaKnown RBP7.95□□□□□ -1.14
SV2B-201ENST00000330276 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.94□□□□□ -1.14
SV2B-201ENST00000330276 NEFMP07197 916 aa7.9□□□□□ -1.14
SV2B-201ENST00000330276 ZNF326Q5BKZ1 582 aaKnown RBP7.9□□□□□ -1.14
SV2B-201ENST00000330276 DNTTIP2Q5QJE6 756 aaKnown RBP7.87□□□□□ -1.15
SV2B-201ENST00000330276 CCDC136Q96JN2 1154 aa7.86□□□□□ -1.15
SV2B-201ENST00000330276 SLC24A1O60721 1099 aa7.86□□□□□ -1.15
SV2B-201ENST00000330276 DDRGK1Q96HY6 314 aa7.85□□□□□ -1.15
SV2B-201ENST00000330276 ARID4BQ4LE39 1312 aaPredicted RBP7.85□□□□□ -1.15
SV2B-201ENST00000330276 DEKP35659 375 aaKnown RBP7.85□□□□□ -1.15
SV2B-201ENST00000330276 PTMAP06454 111 aaKnown RBP7.85□□□□□ -1.15
SV2B-201ENST00000330276 FAM50AQ14320 339 aaKnown RBP7.84□□□□□ -1.15
SV2B-201ENST00000330276 IRX6P78412 446 aaPredicted RBP7.83□□□□□ -1.16
SV2B-201ENST00000330276 BECN1Q14457 450 aa7.82□□□□□ -1.16
SV2B-201ENST00000330276 HNRNPUQ00839 825 aaKnown RBP eCLIP7.82□□□□□ -1.16
SV2B-201ENST00000330276 LAS1LQ9Y4W2 734 aaKnown RBP7.81□□□□□ -1.16
SV2B-201ENST00000330276 TRIM52Q96A61 297 aa7.8□□□□□ -1.16
SV2B-201ENST00000330276 ARID3AQ99856 593 aa7.79□□□□□ -1.16
SV2B-201ENST00000330276 NOP58Q9Y2X3 529 aaKnown RBP7.79□□□□□ -1.16
SV2B-201ENST00000330276 GOLGA6L22H0YM25 854 aa7.78□□□□□ -1.16
SV2B-201ENST00000330276 TNNT3P45378 269 aaPredicted RBP7.78□□□□□ -1.16
SV2B-201ENST00000330276 PPM1GO15355 546 aaPredicted RBP7.77□□□□□ -1.17
SV2B-201ENST00000330276 FAM9BQ8IZU0 186 aa7.75□□□□□ -1.17
SV2B-201ENST00000330276 CHAF1AQ13111 956 aaPredicted RBP7.75□□□□□ -1.17
SV2B-201ENST00000330276 CALRP27797 417 aaKnown RBP7.75□□□□□ -1.17
SV2B-201ENST00000330276 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.74□□□□□ -1.17
SV2B-201ENST00000330276 SALL2Q9Y467 1007 aaPredicted RBP7.73□□□□□ -1.17
SV2B-201ENST00000330276 TPRNQ4KMQ1 711 aa7.73□□□□□ -1.17
SV2B-201ENST00000330276 CSRNP3Q8WYN3 585 aa7.73□□□□□ -1.17
SV2B-201ENST00000330276 PTMSP20962 102 aa7.73□□□□□ -1.17
SV2B-201ENST00000330276 L1TD1Q5T7N2 865 aaKnown RBP7.71□□□□□ -1.18
SV2B-201ENST00000330276 MSNP26038 577 aaKnown RBP7.71□□□□□ -1.18
SV2B-201ENST00000330276 MIER1Q8N108 512 aa7.71□□□□□ -1.18
SV2B-201ENST00000330276 A0A0U1RQG5 324 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms