RNA–Protein interactions for RNA: ENST00000327536.5

TNFAIP8L3-201, Transcript of TNF alpha induced protein 8 like 3, humanhuman

TSL 1 (best) BASIC

Gene TNFAIP8L3, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP8L3-201ENST00000327536 NISCHQ9Y2I1 1504 aa32.16■■■□□ 2.74
TNFAIP8L3-201ENST00000327536 CCDC180Q9P1Z9 1646 aa27.46■■□□□ 1.99
TNFAIP8L3-201ENST00000327536 SHROOM4Q9ULL8 1493 aa27.2■■□□□ 1.95
TNFAIP8L3-201ENST00000327536 ZCCHC6Q5VYS8 1495 aaKnown RBP27.09■■□□□ 1.93
TNFAIP8L3-201ENST00000327536 DCAF8L2P0C7V8 631 aa26.97■■□□□ 1.91
TNFAIP8L3-201ENST00000327536 AEBP2Q6ZN18 517 aaPredicted RBP26.95■■□□□ 1.9
TNFAIP8L3-201ENST00000327536 CHIC1Q5VXU3 224 aa26.74■■□□□ 1.87
TNFAIP8L3-201ENST00000327536 SUPT5HO00267 1087 aaKnown RBP26.44■■□□□ 1.82
TNFAIP8L3-201ENST00000327536 DCAF1Q9Y4B6 1507 aa26.31■■□□□ 1.8
TNFAIP8L3-201ENST00000327536 ABCC9O60706 1549 aa26.05■■□□□ 1.76
TNFAIP8L3-201ENST00000327536 SCRIBQ14160 1630 aa25.79■■□□□ 1.72
TNFAIP8L3-201ENST00000327536 MYO15BQ96JP2 1530 aa25.71■■□□□ 1.71
TNFAIP8L3-201ENST00000327536 NACADO15069 1562 aa25.56■■□□□ 1.68
TNFAIP8L3-201ENST00000327536 RSF1Q96T23 1441 aaPredicted RBP25.3■■□□□ 1.64
TNFAIP8L3-201ENST00000327536 RB1CC1Q8TDY2 1594 aa25.25■■□□□ 1.63
TNFAIP8L3-201ENST00000327536 CECR2Q9BXF3 1484 aa25.2■■□□□ 1.62
TNFAIP8L3-201ENST00000327536 MROH2BQ7Z745 1585 aa25.02■■□□□ 1.6
TNFAIP8L3-201ENST00000327536 PABPN1Q86U42 306 aaKnown RBP eCLIP24.88■■□□□ 1.57
TNFAIP8L3-201ENST00000327536 UNC13AQ9UPW8 1703 aa24.87■■□□□ 1.57
TNFAIP8L3-201ENST00000327536 WIZO95785 1651 aa24.84■■□□□ 1.57
TNFAIP8L3-201ENST00000327536 LOC105371045A0A1W2PR82 267 aa24.72■■□□□ 1.55
TNFAIP8L3-201ENST00000327536 BAZ1AQ9NRL2 1556 aaPredicted RBP24.69■■□□□ 1.54
TNFAIP8L3-201ENST00000327536 BICRAQ9NZM4 1560 aa24.64■■□□□ 1.54
TNFAIP8L3-201ENST00000327536 TRIM41Q8WV44 630 aa24.61■■□□□ 1.53
TNFAIP8L3-201ENST00000327536 SMARCA4P51532 1647 aa24.57■■□□□ 1.52
TNFAIP8L3-201ENST00000327536 FAM9AQ8IZU1 332 aaPredicted RBP24.47■■□□□ 1.51
TNFAIP8L3-201ENST00000327536 TOP2AP11388 1531 aaKnown RBP24.39■■□□□ 1.49
TNFAIP8L3-201ENST00000327536 CCDC88BA6NC98 1476 aa24.35■■□□□ 1.49
TNFAIP8L3-201ENST00000327536 EHMT2Q96KQ7 1210 aa24.34■■□□□ 1.49
TNFAIP8L3-201ENST00000327536 SMARCA2P51531 1590 aa24.27■■□□□ 1.48
TNFAIP8L3-201ENST00000327536 EIF4G1Q04637 1599 aaKnown RBP24.23■■□□□ 1.47
TNFAIP8L3-201ENST00000327536 PCGF6Q9BYE7 350 aa24.14■■□□□ 1.46
TNFAIP8L3-201ENST00000327536 ABCC8Q09428 1581 aa24.14■■□□□ 1.46
TNFAIP8L3-201ENST00000327536 ATAD2BQ9ULI0 1458 aa24.11■■□□□ 1.45
TNFAIP8L3-201ENST00000327536 PEG3Q9GZU2 1588 aa24.09■■□□□ 1.45
TNFAIP8L3-201ENST00000327536 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
TNFAIP8L3-201ENST00000327536 SOGA1O94964 1423 aa23.84■■□□□ 1.41
TNFAIP8L3-201ENST00000327536 RUSC2Q8N2Y8 1516 aa23.77■■□□□ 1.4
TNFAIP8L3-201ENST00000327536 WRNQ14191 1432 aaPredicted RBP eCLIP23.76■■□□□ 1.39
TNFAIP8L3-201ENST00000327536 TRIM26Q12899 539 aaPredicted RBP23.71■■□□□ 1.39
TNFAIP8L3-201ENST00000327536 HRCP23327 699 aa23.71■■□□□ 1.39
TNFAIP8L3-201ENST00000327536 NCAPD3P42695 1498 aa23.7■■□□□ 1.39
TNFAIP8L3-201ENST00000327536 PPARGC1BQ86YN6 1023 aaKnown RBP23.68■■□□□ 1.38
TNFAIP8L3-201ENST00000327536 SYNJ1O43426 1573 aa23.66■■□□□ 1.38
TNFAIP8L3-201ENST00000327536 CSRNP3Q8WYN3 585 aa23.63■■□□□ 1.37
TNFAIP8L3-201ENST00000327536 PHF23Q9BUL5 403 aaPredicted RBP23.61■■□□□ 1.37
TNFAIP8L3-201ENST00000327536 HMGXB3Q12766 1538 aa23.6■■□□□ 1.37
TNFAIP8L3-201ENST00000327536 UBTFP17480 764 aaKnown RBP23.53■■□□□ 1.36
TNFAIP8L3-201ENST00000327536 EEA1Q15075 1411 aa23.47■■□□□ 1.35
TNFAIP8L3-201ENST00000327536 CEP162Q5TB80 1403 aa23.44■■□□□ 1.34
TNFAIP8L3-201ENST00000327536 TNIKQ9UKE5 1360 aa23.41■■□□□ 1.34
TNFAIP8L3-201ENST00000327536 TTBK1Q5TCY1 1321 aaPredicted RBP23.39■■□□□ 1.34
TNFAIP8L3-201ENST00000327536 CC2D2AQ9P2K1 1620 aa23.39■■□□□ 1.34
TNFAIP8L3-201ENST00000327536 CFTRP13569 1480 aa23.38■■□□□ 1.33
TNFAIP8L3-201ENST00000327536 TOP2BQ02880 1626 aa23.36■■□□□ 1.33
TNFAIP8L3-201ENST00000327536 GOLGA3Q08378 1498 aa23.35■■□□□ 1.33
TNFAIP8L3-201ENST00000327536 CUX1P39880 1505 aa23.32■■□□□ 1.32
TNFAIP8L3-201ENST00000327536 RANGAP1P46060 587 aaPredicted RBP23.29■■□□□ 1.32
TNFAIP8L3-201ENST00000327536 CEP164Q9UPV0 1460 aa23.26■■□□□ 1.31
TNFAIP8L3-201ENST00000327536 BIVM-ERCC5R4GMW8 1640 aa23.26■■□□□ 1.31
TNFAIP8L3-201ENST00000327536 RAPGEF2Q9Y4G8 1499 aa23.25■■□□□ 1.31
TNFAIP8L3-201ENST00000327536 CADPSQ9ULU8 1353 aa23.24■■□□□ 1.31
TNFAIP8L3-201ENST00000327536 KIF21BO75037 1637 aa23.19■■□□□ 1.3
TNFAIP8L3-201ENST00000327536 DNAJC5BQ9UF47 199 aa23.16■■□□□ 1.3
TNFAIP8L3-201ENST00000327536 CLIP1P30622 1438 aa23.11■■□□□ 1.29
TNFAIP8L3-201ENST00000327536 NESP48681 1621 aa23.08■■□□□ 1.28
TNFAIP8L3-201ENST00000327536 KIF27Q86VH2 1401 aa23.05■■□□□ 1.28
TNFAIP8L3-201ENST00000327536 PRXQ9BXM0 1461 aa23.04■■□□□ 1.28
TNFAIP8L3-201ENST00000327536 PRDM2Q13029 1718 aa23.02■■□□□ 1.28
TNFAIP8L3-201ENST00000327536 FANCD2Q9BXW9 1451 aa23.01■■□□□ 1.27
TNFAIP8L3-201ENST00000327536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.98■■□□□ 1.27
TNFAIP8L3-201ENST00000327536 CUX2O14529 1486 aa22.97■■□□□ 1.27
TNFAIP8L3-201ENST00000327536 FGD5Q6ZNL6 1462 aa22.97■■□□□ 1.27
TNFAIP8L3-201ENST00000327536 ERICH3Q5RHP9 1530 aa22.91■■□□□ 1.26
TNFAIP8L3-201ENST00000327536 IGF1RP08069 1367 aa22.91■■□□□ 1.26
TNFAIP8L3-201ENST00000327536 VPS8Q8N3P4 1428 aa22.91■■□□□ 1.26
TNFAIP8L3-201ENST00000327536 RAD54L2Q9Y4B4 1467 aa22.86■■□□□ 1.25
TNFAIP8L3-201ENST00000327536 ZEB1P37275 1124 aaPredicted RBP22.86■■□□□ 1.25
TNFAIP8L3-201ENST00000327536 CCER1Q8TC90 406 aaPredicted RBP22.82■■□□□ 1.24
TNFAIP8L3-201ENST00000327536 APLP2Q06481 763 aa22.81■■□□□ 1.24
TNFAIP8L3-201ENST00000327536 TOPBP1Q92547 1522 aa22.8■■□□□ 1.24
TNFAIP8L3-201ENST00000327536 ARAP1Q96P48 1450 aa22.8■■□□□ 1.24
TNFAIP8L3-201ENST00000327536 CARMIL1Q5VZK9 1371 aa22.78■■□□□ 1.24
TNFAIP8L3-201ENST00000327536 POLA1P09884 1462 aaPredicted RBP22.77■■□□□ 1.24
TNFAIP8L3-201ENST00000327536 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
TNFAIP8L3-201ENST00000327536 HNRNPUL2Q1KMD3 747 aaKnown RBP22.73■■□□□ 1.23
TNFAIP8L3-201ENST00000327536 URB2Q14146 1524 aaKnown RBP22.73■■□□□ 1.23
TNFAIP8L3-201ENST00000327536 LAMC3Q9Y6N6 1575 aa22.72■■□□□ 1.23
TNFAIP8L3-201ENST00000327536 SENP3Q9H4L4 574 aaPredicted RBP22.71■■□□□ 1.23
TNFAIP8L3-201ENST00000327536 KANK4Q5T7N3 995 aaPredicted RBP22.71■■□□□ 1.23
TNFAIP8L3-201ENST00000327536 ARHGAP35Q9NRY4 1499 aa22.69■■□□□ 1.22
TNFAIP8L3-201ENST00000327536 ABCA10Q8WWZ4 1543 aa22.65■■□□□ 1.22
TNFAIP8L3-201ENST00000327536 PELP1Q8IZL8 1130 aaKnown RBP22.65■■□□□ 1.22
TNFAIP8L3-201ENST00000327536 TDRD9Q8NDG6 1382 aaKnown RBP22.64■■□□□ 1.21
TNFAIP8L3-201ENST00000327536 PDS5BQ9NTI5 1447 aa22.64■■□□□ 1.21
TNFAIP8L3-201ENST00000327536 P3H3Q8IVL6 736 aa22.63■■□□□ 1.21
TNFAIP8L3-201ENST00000327536 MYT1Q01538 1121 aa22.6■■□□□ 1.21
TNFAIP8L3-201ENST00000327536 KIF21AQ7Z4S6 1674 aa22.57■■□□□ 1.2
TNFAIP8L3-201ENST00000327536 ATP1B4Q9UN42 357 aaPredicted RBP22.46■■□□□ 1.19
TNFAIP8L3-201ENST00000327536 GAPVD1Q14C86 1478 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms