RNA–Protein interactions for RNA: ENST00000325881.8

SNX22-201, Transcript of sorting nexin 22, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX22, Length 3,614 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-201ENST00000325881 NISCHQ9Y2I1 1504 aa25.31■■□□□ 1.64
SNX22-201ENST00000325881 SHROOM4Q9ULL8 1493 aa22.75■■□□□ 1.23
SNX22-201ENST00000325881 SUPT5HO00267 1087 aaKnown RBP22.58■■□□□ 1.21
SNX22-201ENST00000325881 DCAF8L2P0C7V8 631 aa22.43■■□□□ 1.18
SNX22-201ENST00000325881 PCGF6Q9BYE7 350 aa21.73■■□□□ 1.07
SNX22-201ENST00000325881 HRCP23327 699 aa21.66■■□□□ 1.06
SNX22-201ENST00000325881 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
SNX22-201ENST00000325881 MYO15BQ96JP2 1530 aa21.6■■□□□ 1.05
SNX22-201ENST00000325881 PPARGC1BQ86YN6 1023 aaKnown RBP21.52■■□□□ 1.04
SNX22-201ENST00000325881 ZCCHC6Q5VYS8 1495 aaKnown RBP21.41■■□□□ 1.02
SNX22-201ENST00000325881 EHMT2Q96KQ7 1210 aa21.35■■□□□ 1.01
SNX22-201ENST00000325881 LOC105371045A0A1W2PR82 267 aa21.33■■□□□ 1.01
SNX22-201ENST00000325881 FAM9AQ8IZU1 332 aaPredicted RBP21.08■□□□□ 0.96
SNX22-201ENST00000325881 CCDC180Q9P1Z9 1646 aa20.97■□□□□ 0.95
SNX22-201ENST00000325881 TRIM26Q12899 539 aaPredicted RBP20.89■□□□□ 0.94
SNX22-201ENST00000325881 DCAF1Q9Y4B6 1507 aa20.83■□□□□ 0.92
SNX22-201ENST00000325881 TRIM41Q8WV44 630 aa20.71■□□□□ 0.91
SNX22-201ENST00000325881 TTBK1Q5TCY1 1321 aaPredicted RBP20.64■□□□□ 0.89
SNX22-201ENST00000325881 ZEB1P37275 1124 aaPredicted RBP20.49■□□□□ 0.87
SNX22-201ENST00000325881 RSF1Q96T23 1441 aaPredicted RBP20.34■□□□□ 0.85
SNX22-201ENST00000325881 SCAF1Q9H7N4 1312 aaKnown RBP20.33■□□□□ 0.85
SNX22-201ENST00000325881 SCRIBQ14160 1630 aa20.33■□□□□ 0.85
SNX22-201ENST00000325881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.3■□□□□ 0.84
SNX22-201ENST00000325881 ABCC9O60706 1549 aa20.26■□□□□ 0.83
SNX22-201ENST00000325881 CCER1Q8TC90 406 aaPredicted RBP20.24■□□□□ 0.83
SNX22-201ENST00000325881 RB1CC1Q8TDY2 1594 aa20.21■□□□□ 0.83
SNX22-201ENST00000325881 PELP1Q8IZL8 1130 aaKnown RBP20.12■□□□□ 0.81
SNX22-201ENST00000325881 RANGAP1P46060 587 aaPredicted RBP20.04■□□□□ 0.8
SNX22-201ENST00000325881 NEUROD1Q13562 356 aa19.99■□□□□ 0.79
SNX22-201ENST00000325881 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
SNX22-201ENST00000325881 DIEXFQ68CQ4 756 aaKnown RBP19.94■□□□□ 0.78
SNX22-201ENST00000325881 UBTFP17480 764 aaKnown RBP19.94■□□□□ 0.78
SNX22-201ENST00000325881 ACIN1Q9UKV3 1341 aaKnown RBP19.93■□□□□ 0.78
SNX22-201ENST00000325881 GTF3C3Q9Y5Q9 886 aa19.9■□□□□ 0.78
SNX22-201ENST00000325881 YTHDC1Q96MU7 727 aaKnown RBP19.87■□□□□ 0.77
SNX22-201ENST00000325881 MROH2BQ7Z745 1585 aa19.85■□□□□ 0.77
SNX22-201ENST00000325881 CENPBP07199 599 aaPredicted RBP19.84■□□□□ 0.77
SNX22-201ENST00000325881 WIZO95785 1651 aa19.75■□□□□ 0.75
SNX22-201ENST00000325881 HNRNPUL2Q1KMD3 747 aaKnown RBP19.72■□□□□ 0.75
SNX22-201ENST00000325881 ABCC8Q09428 1581 aa19.63■□□□□ 0.73
SNX22-201ENST00000325881 PABPN1Q86U42 306 aaKnown RBP eCLIP19.63■□□□□ 0.73
SNX22-201ENST00000325881 APLP2Q06481 763 aa19.62■□□□□ 0.73
SNX22-201ENST00000325881 CEP162Q5TB80 1403 aa19.6■□□□□ 0.73
SNX22-201ENST00000325881 CCDC88BA6NC98 1476 aa19.6■□□□□ 0.73
SNX22-201ENST00000325881 SOGA1O94964 1423 aa19.57■□□□□ 0.72
SNX22-201ENST00000325881 ZNF316A6NFI3 1004 aaPredicted RBP19.57■□□□□ 0.72
SNX22-201ENST00000325881 CSRNP3Q8WYN3 585 aa19.52■□□□□ 0.72
SNX22-201ENST00000325881 NACADO15069 1562 aa19.49■□□□□ 0.71
SNX22-201ENST00000325881 MIER1Q8N108 512 aa19.47■□□□□ 0.71
SNX22-201ENST00000325881 RUSC2Q8N2Y8 1516 aa19.44■□□□□ 0.7
SNX22-201ENST00000325881 BAZ1AQ9NRL2 1556 aaPredicted RBP19.43■□□□□ 0.7
SNX22-201ENST00000325881 TNIKQ9UKE5 1360 aa19.39■□□□□ 0.69
SNX22-201ENST00000325881 WRNQ14191 1432 aaPredicted RBP eCLIP19.37■□□□□ 0.69
SNX22-201ENST00000325881 ITGAEP38570 1179 aa19.36■□□□□ 0.69
SNX22-201ENST00000325881 EIF4G1Q04637 1599 aaKnown RBP19.28■□□□□ 0.68
SNX22-201ENST00000325881 TOP2AP11388 1531 aaKnown RBP19.26■□□□□ 0.67
SNX22-201ENST00000325881 GOLGA3Q08378 1498 aa19.24■□□□□ 0.67
SNX22-201ENST00000325881 SMARCA2P51531 1590 aa19.22■□□□□ 0.67
SNX22-201ENST00000325881 ATP1B4Q9UN42 357 aaPredicted RBP19.19■□□□□ 0.66
SNX22-201ENST00000325881 CLIP1P30622 1438 aa19.18■□□□□ 0.66
SNX22-201ENST00000325881 SMARCA4P51532 1647 aa19.16■□□□□ 0.66
SNX22-201ENST00000325881 EEA1Q15075 1411 aa19.16■□□□□ 0.66
SNX22-201ENST00000325881 MYT1Q01538 1121 aa19.13■□□□□ 0.65
SNX22-201ENST00000325881 CEP164Q9UPV0 1460 aa19.06■□□□□ 0.64
SNX22-201ENST00000325881 VPS8Q8N3P4 1428 aa19.01■□□□□ 0.63
SNX22-201ENST00000325881 RAPGEF2Q9Y4G8 1499 aa19.01■□□□□ 0.63
SNX22-201ENST00000325881 KANK4Q5T7N3 995 aaPredicted RBP18.95■□□□□ 0.62
SNX22-201ENST00000325881 SYNJ1O43426 1573 aa18.94■□□□□ 0.62
SNX22-201ENST00000325881 BCANQ96GW7 911 aa18.94■□□□□ 0.62
SNX22-201ENST00000325881 SUPT16HQ9Y5B9 1047 aaKnown RBP18.93■□□□□ 0.62
SNX22-201ENST00000325881 DHX57Q6P158 1386 aaKnown RBP18.87■□□□□ 0.61
SNX22-201ENST00000325881 KCNH8Q96L42 1107 aa18.87■□□□□ 0.61
SNX22-201ENST00000325881 P3H3Q8IVL6 736 aa18.86■□□□□ 0.61
SNX22-201ENST00000325881 FAM50AQ14320 339 aaKnown RBP18.83■□□□□ 0.61
SNX22-201ENST00000325881 KIF21BO75037 1637 aa18.83■□□□□ 0.6
SNX22-201ENST00000325881 UNC13AQ9UPW8 1703 aa18.8■□□□□ 0.6
SNX22-201ENST00000325881 HIRIP3Q9BW71 556 aaPredicted RBP18.79■□□□□ 0.6
SNX22-201ENST00000325881 BAZ1BQ9UIG0 1483 aaKnown RBP18.78■□□□□ 0.6
SNX22-201ENST00000325881 DDX10Q13206 875 aaKnown RBP18.74■□□□□ 0.59
SNX22-201ENST00000325881 CLSPNQ9HAW4 1339 aa18.71■□□□□ 0.59
SNX22-201ENST00000325881 TSHZ2Q9NRE2 1034 aa18.7■□□□□ 0.58
SNX22-201ENST00000325881 ATAD2BQ9ULI0 1458 aa18.7■□□□□ 0.58
SNX22-201ENST00000325881 FKBP8Q14318 412 aa18.69■□□□□ 0.58
SNX22-201ENST00000325881 SIN3AQ96ST3 1273 aa18.67■□□□□ 0.58
SNX22-201ENST00000325881 CCNB3Q8WWL7 1395 aa18.66■□□□□ 0.58
SNX22-201ENST00000325881 ARAP1Q96P48 1450 aa18.65■□□□□ 0.58
SNX22-201ENST00000325881 TRIM52Q96A61 297 aa18.64■□□□□ 0.57
SNX22-201ENST00000325881 BICRAQ9NZM4 1560 aa18.63■□□□□ 0.57
SNX22-201ENST00000325881 CNGB1Q14028 1251 aaPredicted RBP18.62■□□□□ 0.57
SNX22-201ENST00000325881 RAB3GAP2Q9H2M9 1393 aa18.6■□□□□ 0.57
SNX22-201ENST00000325881 NEFLP07196 543 aa18.59■□□□□ 0.57
SNX22-201ENST00000325881 PRXQ9BXM0 1461 aa18.53■□□□□ 0.56
SNX22-201ENST00000325881 KIF27Q86VH2 1401 aa18.53■□□□□ 0.56
SNX22-201ENST00000325881 ANP32EQ9BTT0 268 aa18.52■□□□□ 0.56
SNX22-201ENST00000325881 TOP2BQ02880 1626 aa18.52■□□□□ 0.56
SNX22-201ENST00000325881 RRBP1Q9P2E9 1410 aaKnown RBP18.52■□□□□ 0.55
SNX22-201ENST00000325881 PEG3Q9GZU2 1588 aa18.51■□□□□ 0.55
SNX22-201ENST00000325881 ARID3CA6NKF2 412 aa18.49■□□□□ 0.55
SNX22-201ENST00000325881 ANP32CO43423 234 aa18.46■□□□□ 0.55
SNX22-201ENST00000325881 ARHGAP35Q9NRY4 1499 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms