RNA–Protein interactions for RNA: ENST00000324767.11

SCAPER-202, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAPER, Length 4,707 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-202ENST00000324767 NISCHQ9Y2I1 1504 aa14.52□□□□□ -0.08
SCAPER-202ENST00000324767 DCAF8L2P0C7V8 631 aa13.81□□□□□ -0.2
SCAPER-202ENST00000324767 SUPT5HO00267 1087 aaKnown RBP13.01□□□□□ -0.33
SCAPER-202ENST00000324767 SHROOM4Q9ULL8 1493 aa12.96□□□□□ -0.33
SCAPER-202ENST00000324767 FAM9AQ8IZU1 332 aaPredicted RBP12.34□□□□□ -0.43
SCAPER-202ENST00000324767 APLP2Q06481 763 aa12.31□□□□□ -0.44
SCAPER-202ENST00000324767 CCDC180Q9P1Z9 1646 aa12.28□□□□□ -0.44
SCAPER-202ENST00000324767 ABCC9O60706 1549 aa12.28□□□□□ -0.44
SCAPER-202ENST00000324767 TRIM41Q8WV44 630 aa12.25□□□□□ -0.45
SCAPER-202ENST00000324767 EHMT2Q96KQ7 1210 aa12.13□□□□□ -0.47
SCAPER-202ENST00000324767 ZCCHC6Q5VYS8 1495 aaKnown RBP12.07□□□□□ -0.48
SCAPER-202ENST00000324767 UBTFP17480 764 aaKnown RBP11.99□□□□□ -0.49
SCAPER-202ENST00000324767 PABPN1Q86U42 306 aaKnown RBP eCLIP11.92□□□□□ -0.5
SCAPER-202ENST00000324767 CHIC1Q5VXU3 224 aa11.86□□□□□ -0.51
SCAPER-202ENST00000324767 ZEB1P37275 1124 aaPredicted RBP11.85□□□□□ -0.51
SCAPER-202ENST00000324767 RB1CC1Q8TDY2 1594 aa11.84□□□□□ -0.51
SCAPER-202ENST00000324767 NACADO15069 1562 aa11.82□□□□□ -0.52
SCAPER-202ENST00000324767 RANGAP1P46060 587 aaPredicted RBP11.81□□□□□ -0.52
SCAPER-202ENST00000324767 SCRIBQ14160 1630 aa11.79□□□□□ -0.52
SCAPER-202ENST00000324767 ATP1B4Q9UN42 357 aaPredicted RBP11.79□□□□□ -0.52
SCAPER-202ENST00000324767 PCGF6Q9BYE7 350 aa11.78□□□□□ -0.52
SCAPER-202ENST00000324767 DCAF1Q9Y4B6 1507 aa11.78□□□□□ -0.52
SCAPER-202ENST00000324767 TTBK1Q5TCY1 1321 aaPredicted RBP11.71□□□□□ -0.54
SCAPER-202ENST00000324767 CCER1Q8TC90 406 aaPredicted RBP11.66□□□□□ -0.54
SCAPER-202ENST00000324767 TRIM26Q12899 539 aaPredicted RBP11.64□□□□□ -0.55
SCAPER-202ENST00000324767 PELP1Q8IZL8 1130 aaKnown RBP11.62□□□□□ -0.55
SCAPER-202ENST00000324767 MYO15BQ96JP2 1530 aa11.56□□□□□ -0.56
SCAPER-202ENST00000324767 LOC105371045A0A1W2PR82 267 aa11.54□□□□□ -0.56
SCAPER-202ENST00000324767 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.54□□□□□ -0.56
SCAPER-202ENST00000324767 HNRNPUL2Q1KMD3 747 aaKnown RBP11.54□□□□□ -0.56
SCAPER-202ENST00000324767 CSRNP3Q8WYN3 585 aa11.48□□□□□ -0.57
SCAPER-202ENST00000324767 RSF1Q96T23 1441 aaPredicted RBP11.45□□□□□ -0.58
SCAPER-202ENST00000324767 BAZ1AQ9NRL2 1556 aaPredicted RBP11.45□□□□□ -0.58
SCAPER-202ENST00000324767 CENPBP07199 599 aaPredicted RBP11.41□□□□□ -0.58
SCAPER-202ENST00000324767 PPARGC1BQ86YN6 1023 aaKnown RBP11.4□□□□□ -0.58
SCAPER-202ENST00000324767 BAZ1BQ9UIG0 1483 aaKnown RBP11.38□□□□□ -0.59
SCAPER-202ENST00000324767 MYT1LQ9UL68 1186 aa11.37□□□□□ -0.59
SCAPER-202ENST00000324767 EEA1Q15075 1411 aa11.35□□□□□ -0.59
SCAPER-202ENST00000324767 ITGAEP38570 1179 aa11.34□□□□□ -0.59
SCAPER-202ENST00000324767 FBLN2P98095 1184 aa11.31□□□□□ -0.6
SCAPER-202ENST00000324767 CDK11AQ9UQ88 783 aaPredicted RBP11.3□□□□□ -0.6
SCAPER-202ENST00000324767 HRCP23327 699 aa11.28□□□□□ -0.6
SCAPER-202ENST00000324767 FAM50AQ14320 339 aaKnown RBP11.27□□□□□ -0.61
SCAPER-202ENST00000324767 SMARCA2P51531 1590 aa11.25□□□□□ -0.61
SCAPER-202ENST00000324767 WRNQ14191 1432 aaPredicted RBP eCLIP11.23□□□□□ -0.61
SCAPER-202ENST00000324767 CECR2Q9BXF3 1484 aa11.21□□□□□ -0.61
SCAPER-202ENST00000324767 KIF27Q86VH2 1401 aa11.16□□□□□ -0.62
SCAPER-202ENST00000324767 NEFLP07196 543 aa11.16□□□□□ -0.62
SCAPER-202ENST00000324767 TRIM52Q96A61 297 aa11.15□□□□□ -0.62
SCAPER-202ENST00000324767 GOLGA3Q08378 1498 aa11.14□□□□□ -0.63
SCAPER-202ENST00000324767 MROH2BQ7Z745 1585 aa11.13□□□□□ -0.63
SCAPER-202ENST00000324767 P3H3Q8IVL6 736 aa11.13□□□□□ -0.63
SCAPER-202ENST00000324767 CHMP7Q8WUX9 453 aaPredicted RBP11.11□□□□□ -0.63
SCAPER-202ENST00000324767 NPM1P06748 294 aaKnown RBP eCLIP11.1□□□□□ -0.63
SCAPER-202ENST00000324767 CEP164Q9UPV0 1460 aa11.09□□□□□ -0.63
SCAPER-202ENST00000324767 CLIP1P30622 1438 aa11.09□□□□□ -0.63
SCAPER-202ENST00000324767 TOP2AP11388 1531 aaKnown RBP11.08□□□□□ -0.64
SCAPER-202ENST00000324767 ACIN1Q9UKV3 1341 aaKnown RBP11.07□□□□□ -0.64
SCAPER-202ENST00000324767 ERCC6Q03468 1493 aa11.06□□□□□ -0.64
SCAPER-202ENST00000324767 PDS5BQ9NTI5 1447 aa11.06□□□□□ -0.64
SCAPER-202ENST00000324767 TNIKQ9UKE5 1360 aa11.05□□□□□ -0.64
SCAPER-202ENST00000324767 CCDC88BA6NC98 1476 aa11.04□□□□□ -0.64
SCAPER-202ENST00000324767 POLR3GLQ9BT43 218 aa11.02□□□□□ -0.65
SCAPER-202ENST00000324767 MTUS2Q5JR59 1369 aa11.01□□□□□ -0.65
SCAPER-202ENST00000324767 SMARCA4P51532 1647 aa11.01□□□□□ -0.65
SCAPER-202ENST00000324767 ATAD2BQ9ULI0 1458 aa11.01□□□□□ -0.65
SCAPER-202ENST00000324767 CEP162Q5TB80 1403 aa10.99□□□□□ -0.65
SCAPER-202ENST00000324767 ZNF777Q9ULD5 760 aaPredicted RBP10.98□□□□□ -0.65
SCAPER-202ENST00000324767 CADPSQ9ULU8 1353 aa10.97□□□□□ -0.65
SCAPER-202ENST00000324767 NEUROD1Q13562 356 aa10.97□□□□□ -0.65
SCAPER-202ENST00000324767 YTHDC1Q96MU7 727 aaKnown RBP10.97□□□□□ -0.65
SCAPER-202ENST00000324767 ARID3CA6NKF2 412 aa10.96□□□□□ -0.65
SCAPER-202ENST00000324767 DIEXFQ68CQ4 756 aaKnown RBP10.94□□□□□ -0.66
SCAPER-202ENST00000324767 WIZO95785 1651 aa10.94□□□□□ -0.66
SCAPER-202ENST00000324767 TSPY4P0CV99 314 aa10.94□□□□□ -0.66
SCAPER-202ENST00000324767 TSPY10P0CW01 314 aa10.94□□□□□ -0.66
SCAPER-202ENST00000324767 CUX2O14529 1486 aa10.94□□□□□ -0.66
SCAPER-202ENST00000324767 FHAD1B1AJZ9 1412 aa10.94□□□□□ -0.66
SCAPER-202ENST00000324767 CARMIL1Q5VZK9 1371 aa10.93□□□□□ -0.66
SCAPER-202ENST00000324767 PLEKHD1A6NEE1 506 aa10.92□□□□□ -0.66
SCAPER-202ENST00000324767 ABCC8Q09428 1581 aa10.91□□□□□ -0.66
SCAPER-202ENST00000324767 ESF1Q9H501 851 aaKnown RBP10.9□□□□□ -0.66
SCAPER-202ENST00000324767 ZNF316A6NFI3 1004 aaPredicted RBP10.88□□□□□ -0.67
SCAPER-202ENST00000324767 ERICH6Q7L0X2 663 aa10.88□□□□□ -0.67
SCAPER-202ENST00000324767 SLC4A1APQ9BWU0 796 aaKnown RBP10.88□□□□□ -0.67
SCAPER-202ENST00000324767 TONSLQ96HA7 1378 aa10.88□□□□□ -0.67
SCAPER-202ENST00000324767 ANP32CO43423 234 aa10.87□□□□□ -0.67
SCAPER-202ENST00000324767 SOGA1O94964 1423 aa10.87□□□□□ -0.67
SCAPER-202ENST00000324767 NCAPD3P42695 1498 aa10.87□□□□□ -0.67
SCAPER-202ENST00000324767 ZNF326Q5BKZ1 582 aaKnown RBP10.86□□□□□ -0.67
SCAPER-202ENST00000324767 CARMIL2Q6F5E8 1435 aa10.82□□□□□ -0.68
SCAPER-202ENST00000324767 EIF4G1Q04637 1599 aaKnown RBP10.8□□□□□ -0.68
SCAPER-202ENST00000324767 FANCD2Q9BXW9 1451 aa10.78□□□□□ -0.68
SCAPER-202ENST00000324767 CFDP1Q9UEE9 299 aaPredicted RBP10.78□□□□□ -0.68
SCAPER-202ENST00000324767 FMN1Q68DA7 1419 aa10.78□□□□□ -0.68
SCAPER-202ENST00000324767 VPS8Q8N3P4 1428 aa10.78□□□□□ -0.68
SCAPER-202ENST00000324767 CHIC2Q9UKJ5 165 aa10.77□□□□□ -0.69
SCAPER-202ENST00000324767 RAPGEF2Q9Y4G8 1499 aa10.76□□□□□ -0.69
SCAPER-202ENST00000324767 STAG3Q9UJ98 1225 aa10.76□□□□□ -0.69
SCAPER-202ENST00000324767 BCANQ96GW7 911 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms