RNA–Protein interactions for RNA: ENST00000324330.13

NIN-202, Transcript of ninein, humanhuman

TSL 5 BASIC

Gene NIN, Length 4,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-202ENST00000324330 DCAF8L2P0C7V8 631 aa26.56■■□□□ 1.84
NIN-202ENST00000324330 NISCHQ9Y2I1 1504 aa26.49■■□□□ 1.83
NIN-202ENST00000324330 SUPT5HO00267 1087 aaKnown RBP25.47■■□□□ 1.67
NIN-202ENST00000324330 SHROOM4Q9ULL8 1493 aa25.44■■□□□ 1.66
NIN-202ENST00000324330 EHMT2Q96KQ7 1210 aa24.65■■□□□ 1.54
NIN-202ENST00000324330 FAM9AQ8IZU1 332 aaPredicted RBP24■■□□□ 1.43
NIN-202ENST00000324330 TTBK1Q5TCY1 1321 aaPredicted RBP23.68■■□□□ 1.38
NIN-202ENST00000324330 PCGF6Q9BYE7 350 aa23.59■■□□□ 1.37
NIN-202ENST00000324330 RANGAP1P46060 587 aaPredicted RBP23.38■■□□□ 1.33
NIN-202ENST00000324330 TRIM41Q8WV44 630 aa23.29■■□□□ 1.32
NIN-202ENST00000324330 PPARGC1BQ86YN6 1023 aaKnown RBP23.22■■□□□ 1.31
NIN-202ENST00000324330 LOC105371045A0A1W2PR82 267 aa23.13■■□□□ 1.29
NIN-202ENST00000324330 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
NIN-202ENST00000324330 APLP2Q06481 763 aa22.87■■□□□ 1.25
NIN-202ENST00000324330 UBTFP17480 764 aaKnown RBP22.84■■□□□ 1.25
NIN-202ENST00000324330 ABCC9O60706 1549 aa22.76■■□□□ 1.23
NIN-202ENST00000324330 ATP1B4Q9UN42 357 aaPredicted RBP22.68■■□□□ 1.22
NIN-202ENST00000324330 PABPN1Q86U42 306 aaKnown RBP eCLIP22.67■■□□□ 1.22
NIN-202ENST00000324330 CCER1Q8TC90 406 aaPredicted RBP22.62■■□□□ 1.21
NIN-202ENST00000324330 TRIM26Q12899 539 aaPredicted RBP22.32■■□□□ 1.16
NIN-202ENST00000324330 HRCP23327 699 aa22.27■■□□□ 1.16
NIN-202ENST00000324330 ITGAEP38570 1179 aa22.27■■□□□ 1.16
NIN-202ENST00000324330 HNRNPUL2Q1KMD3 747 aaKnown RBP22.2■■□□□ 1.14
NIN-202ENST00000324330 YTHDC1Q96MU7 727 aaKnown RBP22.17■■□□□ 1.14
NIN-202ENST00000324330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.14■■□□□ 1.13
NIN-202ENST00000324330 ZEB1P37275 1124 aaPredicted RBP22.07■■□□□ 1.12
NIN-202ENST00000324330 ZCCHC6Q5VYS8 1495 aaKnown RBP21.97■■□□□ 1.11
NIN-202ENST00000324330 SCRIBQ14160 1630 aa21.87■■□□□ 1.09
NIN-202ENST00000324330 CENPBP07199 599 aaPredicted RBP21.75■■□□□ 1.07
NIN-202ENST00000324330 CNGB1Q14028 1251 aaPredicted RBP21.73■■□□□ 1.07
NIN-202ENST00000324330 MYO15BQ96JP2 1530 aa21.64■■□□□ 1.05
NIN-202ENST00000324330 P3H3Q8IVL6 736 aa21.62■■□□□ 1.05
NIN-202ENST00000324330 ARID3CA6NKF2 412 aa21.55■■□□□ 1.04
NIN-202ENST00000324330 CSRNP3Q8WYN3 585 aa21.55■■□□□ 1.04
NIN-202ENST00000324330 FAM50AQ14320 339 aaKnown RBP21.54■■□□□ 1.04
NIN-202ENST00000324330 POLR3GLQ9BT43 218 aa21.54■■□□□ 1.04
NIN-202ENST00000324330 PELP1Q8IZL8 1130 aaKnown RBP21.47■■□□□ 1.03
NIN-202ENST00000324330 DIEXFQ68CQ4 756 aaKnown RBP21.44■■□□□ 1.02
NIN-202ENST00000324330 NEUROD1Q13562 356 aa21.42■■□□□ 1.02
NIN-202ENST00000324330 CCDC180Q9P1Z9 1646 aa21.41■■□□□ 1.02
NIN-202ENST00000324330 FBLN2P98095 1184 aa21.39■■□□□ 1.01
NIN-202ENST00000324330 RSF1Q96T23 1441 aaPredicted RBP21.37■■□□□ 1.01
NIN-202ENST00000324330 MYT1LQ9UL68 1186 aa21.36■■□□□ 1.01
NIN-202ENST00000324330 CECR2Q9BXF3 1484 aa21.23■□□□□ 0.99
NIN-202ENST00000324330 TRIM52Q96A61 297 aa21.2■□□□□ 0.98
NIN-202ENST00000324330 NEFLP07196 543 aa21.13■□□□□ 0.97
NIN-202ENST00000324330 ZNF326Q5BKZ1 582 aaKnown RBP21.09■□□□□ 0.97
NIN-202ENST00000324330 GTF3C3Q9Y5Q9 886 aa21.01■□□□□ 0.95
NIN-202ENST00000324330 DCAF1Q9Y4B6 1507 aa20.99■□□□□ 0.95
NIN-202ENST00000324330 BCANQ96GW7 911 aa20.98■□□□□ 0.95
NIN-202ENST00000324330 ZNF316A6NFI3 1004 aaPredicted RBP20.97■□□□□ 0.95
NIN-202ENST00000324330 ZNF777Q9ULD5 760 aaPredicted RBP20.95■□□□□ 0.94
NIN-202ENST00000324330 ERICH6Q7L0X2 663 aa20.88■□□□□ 0.93
NIN-202ENST00000324330 HIRIP3Q9BW71 556 aaPredicted RBP20.88■□□□□ 0.93
NIN-202ENST00000324330 CHIC2Q9UKJ5 165 aa20.88■□□□□ 0.93
NIN-202ENST00000324330 RB1CC1Q8TDY2 1594 aa20.86■□□□□ 0.93
NIN-202ENST00000324330 SLC4A1APQ9BWU0 796 aaKnown RBP20.83■□□□□ 0.93
NIN-202ENST00000324330 MROH2BQ7Z745 1585 aa20.81■□□□□ 0.92
NIN-202ENST00000324330 SOGA1O94964 1423 aa20.78■□□□□ 0.92
NIN-202ENST00000324330 CEP162Q5TB80 1403 aa20.77■□□□□ 0.92
NIN-202ENST00000324330 CLIP1P30622 1438 aa20.77■□□□□ 0.91
NIN-202ENST00000324330 NACADO15069 1562 aa20.75■□□□□ 0.91
NIN-202ENST00000324330 WRNQ14191 1432 aaPredicted RBP eCLIP20.75■□□□□ 0.91
NIN-202ENST00000324330 DDX10Q13206 875 aaKnown RBP20.71■□□□□ 0.91
NIN-202ENST00000324330 ACIN1Q9UKV3 1341 aaKnown RBP20.68■□□□□ 0.9
NIN-202ENST00000324330 ABCC8Q09428 1581 aa20.65■□□□□ 0.9
NIN-202ENST00000324330 BAZ1BQ9UIG0 1483 aaKnown RBP20.65■□□□□ 0.9
NIN-202ENST00000324330 ANP32CO43423 234 aa20.63■□□□□ 0.89
NIN-202ENST00000324330 MIER1Q8N108 512 aa20.62■□□□□ 0.89
NIN-202ENST00000324330 CCDC88BA6NC98 1476 aa20.59■□□□□ 0.89
NIN-202ENST00000324330 RRP7BPQ9NSQ0 103 aa20.58■□□□□ 0.88
NIN-202ENST00000324330 SENP3-EIF4A1A0A087X0R7 540 aa20.57■□□□□ 0.88
NIN-202ENST00000324330 BAZ1AQ9NRL2 1556 aaPredicted RBP20.55■□□□□ 0.88
NIN-202ENST00000324330 SENP3Q9H4L4 574 aaPredicted RBP20.52■□□□□ 0.87
NIN-202ENST00000324330 GOLGA3Q08378 1498 aa20.51■□□□□ 0.87
NIN-202ENST00000324330 WIZO95785 1651 aa20.5■□□□□ 0.87
NIN-202ENST00000324330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.48■□□□□ 0.872e-6■■■□□ 16.6
NIN-202ENST00000324330 MTUS2Q5JR59 1369 aa20.48■□□□□ 0.87
NIN-202ENST00000324330 TNIKQ9UKE5 1360 aa20.47■□□□□ 0.87
NIN-202ENST00000324330 CHMP7Q8WUX9 453 aaPredicted RBP20.47■□□□□ 0.87
NIN-202ENST00000324330 SCAF1Q9H7N4 1312 aaKnown RBP20.47■□□□□ 0.87
NIN-202ENST00000324330 TONSLQ96HA7 1378 aa20.46■□□□□ 0.87
NIN-202ENST00000324330 SIN3AQ96ST3 1273 aa20.45■□□□□ 0.86
NIN-202ENST00000324330 SALL2Q9Y467 1007 aaPredicted RBP20.44■□□□□ 0.86
NIN-202ENST00000324330 KANK4Q5T7N3 995 aaPredicted RBP20.44■□□□□ 0.86
NIN-202ENST00000324330 CDK11AQ9UQ88 783 aaPredicted RBP20.43■□□□□ 0.86
NIN-202ENST00000324330 KDM2AQ9Y2K7 1162 aa20.42■□□□□ 0.86
NIN-202ENST00000324330 FAM9BQ8IZU0 186 aa20.39■□□□□ 0.85
NIN-202ENST00000324330 RUSC2Q8N2Y8 1516 aa20.37■□□□□ 0.85
NIN-202ENST00000324330 KCNH8Q96L42 1107 aa20.37■□□□□ 0.85
NIN-202ENST00000324330 KIF27Q86VH2 1401 aa20.36■□□□□ 0.85
NIN-202ENST00000324330 PLPPR3Q6T4P5 718 aa20.35■□□□□ 0.85
NIN-202ENST00000324330 CHGAP10645 457 aaKnown RBP20.34■□□□□ 0.85
NIN-202ENST00000324330 BCL11AQ9H165 835 aa20.34■□□□□ 0.85
NIN-202ENST00000324330 HNRNPUQ00839 825 aaKnown RBP eCLIP20.33■□□□□ 0.85
NIN-202ENST00000324330 EEA1Q15075 1411 aa20.33■□□□□ 0.84
NIN-202ENST00000324330 FKBP8Q14318 412 aa20.32■□□□□ 0.84
NIN-202ENST00000324330 CEP164Q9UPV0 1460 aa20.32■□□□□ 0.84
NIN-202ENST00000324330 IRX6P78412 446 aaPredicted RBP20.3■□□□□ 0.84
NIN-202ENST00000324330 CUX2O14529 1486 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms