RNA–Protein interactions for RNA: ENST00000320493.9

CFHR1-201, Transcript of complement factor H related 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFHR1, Length 1,271 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-201ENST00000320493 AEBP2Q6ZN18 517 aaPredicted RBP25.93■■□□□ 1.74
CFHR1-201ENST00000320493 CHIC1Q5VXU3 224 aa24.21■■□□□ 1.47
CFHR1-201ENST00000320493 SENP3Q9H4L4 574 aaPredicted RBP22.21■■□□□ 1.15
CFHR1-201ENST00000320493 PHF23Q9BUL5 403 aaPredicted RBP21.84■■□□□ 1.09
CFHR1-201ENST00000320493 FOXD1Q16676 465 aa20.8■□□□□ 0.92
CFHR1-201ENST00000320493 POTEDQ86YR6 584 aa20.36■□□□□ 0.85
CFHR1-201ENST00000320493 MSH5O43196 834 aa19.71■□□□□ 0.75
CFHR1-201ENST00000320493 PIAS4Q8N2W9 510 aaPredicted RBP19.21■□□□□ 0.67
CFHR1-201ENST00000320493 PPP6R1Q9UPN7 881 aa18.94■□□□□ 0.62
CFHR1-201ENST00000320493 PLPPR3Q6T4P5 718 aa18.86■□□□□ 0.61
CFHR1-201ENST00000320493 ADRA2BP18089 450 aa18.8■□□□□ 0.6
CFHR1-201ENST00000320493 DMRT2Q9Y5R5 561 aa17.53■□□□□ 0.4
CFHR1-201ENST00000320493 MAPK8IP2Q13387 824 aaPredicted RBP17.48■□□□□ 0.39
CFHR1-201ENST00000320493 CACNB1Q02641 598 aaPredicted RBP17.27■□□□□ 0.36
CFHR1-201ENST00000320493 SCAF1Q9H7N4 1312 aaKnown RBP17.23■□□□□ 0.35
CFHR1-201ENST00000320493 RNF39Q9H2S5 420 aa16.78■□□□□ 0.28
CFHR1-201ENST00000320493 DCAF8L1A6NGE4 600 aa16.71■□□□□ 0.27
CFHR1-201ENST00000320493 HOXD11P31277 338 aaPredicted RBP16.66■□□□□ 0.26
CFHR1-201ENST00000320493 C1QBPQ07021 282 aaKnown RBP16.5■□□□□ 0.23
CFHR1-201ENST00000320493 PPP4R3CPQ6ZMV5 832 aa16.43■□□□□ 0.22
CFHR1-201ENST00000320493 RNF216Q9NWF9 866 aaPredicted RBP16.33■□□□□ 0.2
CFHR1-201ENST00000320493 CNKSR2Q8WXI2 1034 aa16.29■□□□□ 0.2
CFHR1-201ENST00000320493 DNAJC5BQ9UF47 199 aa16.29■□□□□ 0.2
CFHR1-201ENST00000320493 POTEHQ6S545 545 aa15.81■□□□□ 0.12
CFHR1-201ENST00000320493 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.76■□□□□ 0.11
CFHR1-201ENST00000320493 NCBP3Q53F19 620 aaKnown RBP15.59■□□□□ 0.09
CFHR1-201ENST00000320493 DSG3P32926 999 aa15.48■□□□□ 0.07
CFHR1-201ENST00000320493 U3KPZ7 1027 aaPredicted RBP15.41■□□□□ 0.06
CFHR1-201ENST00000320493 NPM3O75607 178 aaKnown RBP15.37■□□□□ 0.05
CFHR1-201ENST00000320493 SPINK5Q9NQ38 1064 aaPredicted RBP15.36■□□□□ 0.05
CFHR1-201ENST00000320493 CAPN15O75808 1086 aa15.33■□□□□ 0.04
CFHR1-201ENST00000320493 ZNF219Q9P2Y4 722 aaPredicted RBP14.92□□□□□ -0.02
CFHR1-201ENST00000320493 TRHP20396 242 aaPredicted RBP14.91□□□□□ -0.02
CFHR1-201ENST00000320493 APLP2Q06481 763 aa14.9□□□□□ -0.02
CFHR1-201ENST00000320493 ABCB7O75027 752 aa14.89□□□□□ -0.03
CFHR1-201ENST00000320493 SLC4A2P04920 1241 aa14.88□□□□□ -0.03
CFHR1-201ENST00000320493 RBM42Q9BTD8 480 aaKnown RBP14.76□□□□□ -0.05
CFHR1-201ENST00000320493 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.75□□□□□ -0.05
CFHR1-201ENST00000320493 HNRNPUL2Q1KMD3 747 aaKnown RBP14.75□□□□□ -0.05
CFHR1-201ENST00000320493 CHRDL2Q6WN34 429 aa14.69□□□□□ -0.06
CFHR1-201ENST00000320493 SAMD1Q6SPF0 538 aaPredicted RBP14.62□□□□□ -0.07
CFHR1-201ENST00000320493 KCNA4P22459 653 aa14.61□□□□□ -0.07
CFHR1-201ENST00000320493 SP7Q8TDD2 431 aaPredicted RBP14.51□□□□□ -0.09
CFHR1-201ENST00000320493 POLA2Q14181 598 aa14.41□□□□□ -0.1
CFHR1-201ENST00000320493 AKT1S1Q96B36 256 aa14.3□□□□□ -0.12
CFHR1-201ENST00000320493 MYCNP04198 464 aaPredicted RBP14.22□□□□□ -0.13
CFHR1-201ENST00000320493 PIP4P2Q8N4L2 257 aa14.21□□□□□ -0.13
CFHR1-201ENST00000320493 REM2Q8IYK8 340 aaPredicted RBP14.15□□□□□ -0.14
CFHR1-201ENST00000320493 HAX1O00165 279 aa14.09□□□□□ -0.15
CFHR1-201ENST00000320493 ZBTB12Q9Y330 459 aaPredicted RBP14.08□□□□□ -0.16
CFHR1-201ENST00000320493 FXR2P51116 673 aaKnown RBP eCLIP14.06□□□□□ -0.16
CFHR1-201ENST00000320493 PITPNM1O00562 1244 aa14□□□□□ -0.17
CFHR1-201ENST00000320493 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
CFHR1-201ENST00000320493 OSCARQ8IYS5 282 aa13.94□□□□□ -0.18
CFHR1-201ENST00000320493 EVX2Q03828 476 aa13.92□□□□□ -0.18
CFHR1-201ENST00000320493 SLC4A1APQ9BWU0 796 aaKnown RBP13.82□□□□□ -0.2
CFHR1-201ENST00000320493 FOXD4L1Q9NU39 408 aa13.72□□□□□ -0.21
CFHR1-201ENST00000320493 C19orf67A6NJJ6 358 aa13.63□□□□□ -0.23
CFHR1-201ENST00000320493 SPDYE2BA6NHP3 402 aa13.61□□□□□ -0.23
CFHR1-201ENST00000320493 SPDYE6P0CI01 402 aa13.61□□□□□ -0.23
CFHR1-201ENST00000320493 PRKAR2AP13861 404 aaKnown RBP13.61□□□□□ -0.23
CFHR1-201ENST00000320493 SPDYE2Q495Y8 402 aa13.61□□□□□ -0.23
CFHR1-201ENST00000320493 LHX8Q68G74 356 aa13.6□□□□□ -0.23
CFHR1-201ENST00000320493 GABBR2O75899 941 aa13.57□□□□□ -0.24
CFHR1-201ENST00000320493 SPDYE1Q8NFV5 336 aaPredicted RBP13.51□□□□□ -0.25
CFHR1-201ENST00000320493 ZBTB22O15209 634 aa13.49□□□□□ -0.25
CFHR1-201ENST00000320493 CLEC11AQ9Y240 323 aa13.46□□□□□ -0.25
CFHR1-201ENST00000320493 ATXN8OSP0DMR3 200 aa13.42□□□□□ -0.26
CFHR1-201ENST00000320493 FBLN2P98095 1184 aa13.42□□□□□ -0.26
CFHR1-201ENST00000320493 SSUH2Q9Y2M2 353 aa13.37□□□□□ -0.27
CFHR1-201ENST00000320493 POTEIP0CG38 1075 aa13.3□□□□□ -0.28
CFHR1-201ENST00000320493 MKRN4PQ13434 485 aaPredicted RBP13.3□□□□□ -0.28
CFHR1-201ENST00000320493 CHADLQ6NUI6 762 aa13.3□□□□□ -0.28
CFHR1-201ENST00000320493 ZNF692Q9BU19 519 aaPredicted RBP13.3□□□□□ -0.28
CFHR1-201ENST00000320493 EHMT2Q96KQ7 1210 aa13.29□□□□□ -0.28
CFHR1-201ENST00000320493 CLCN6P51797 869 aa13.2□□□□□ -0.3
CFHR1-201ENST00000320493 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
CFHR1-201ENST00000320493 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
CFHR1-201ENST00000320493 PLSCR2Q9NRY7 297 aa13.19□□□□□ -0.3
CFHR1-201ENST00000320493 CD44P16070 742 aaKnown RBP13.13□□□□□ -0.31
CFHR1-201ENST00000320493 PABPN1Q86U42 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
CFHR1-201ENST00000320493 FARP1Q9Y4F1 1045 aaPredicted RBP13.08□□□□□ -0.32
CFHR1-201ENST00000320493 DCBLD2Q96PD2 775 aa13.01□□□□□ -0.33
CFHR1-201ENST00000320493 ZNF579Q8NAF0 562 aaKnown RBP12.95□□□□□ -0.34
CFHR1-201ENST00000320493 OTUD5Q96G74 571 aa12.92□□□□□ -0.34
CFHR1-201ENST00000320493 POTEB2H3BUK9 544 aa12.84□□□□□ -0.35
CFHR1-201ENST00000320493 ZRANB1Q9UGI0 708 aa12.84□□□□□ -0.35
CFHR1-201ENST00000320493 POTEMA6NI47 508 aa12.82□□□□□ -0.36
CFHR1-201ENST00000320493 GALR2O43603 387 aaPredicted RBP12.8□□□□□ -0.36
CFHR1-201ENST00000320493 POTEGQ6S5H5 508 aa12.76□□□□□ -0.37
CFHR1-201ENST00000320493 CREBZFQ9NS37 354 aa12.74□□□□□ -0.37
CFHR1-201ENST00000320493 PCDH10Q9P2E7 1040 aa12.73□□□□□ -0.37
CFHR1-201ENST00000320493 PELP1Q8IZL8 1130 aaKnown RBP12.64□□□□□ -0.39
CFHR1-201ENST00000320493 STAG3Q9UJ98 1225 aa12.62□□□□□ -0.39
CFHR1-201ENST00000320493 PHF12Q96QT6 1004 aa12.6□□□□□ -0.39
CFHR1-201ENST00000320493 PAK3O75914 559 aaPredicted RBP12.57□□□□□ -0.4
CFHR1-201ENST00000320493 POTEJP0CG39 1038 aa12.55□□□□□ -0.4
CFHR1-201ENST00000320493 ASTLQ6HA08 431 aaPredicted RBP12.54□□□□□ -0.4
CFHR1-201ENST00000320493 C7P10643 843 aa12.51□□□□□ -0.41
CFHR1-201ENST00000320493 LCE2DQ5TA82 110 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms