RNA–Protein interactions for RNA: ENST00000318950.10

SWAP70-201, Transcript of switching B cell complex subunit SWAP70, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWAP70, Length 4,882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWAP70-201ENST00000318950 NISCHQ9Y2I1 1504 aa26.99■■□□□ 1.91
SWAP70-201ENST00000318950 SHROOM4Q9ULL8 1493 aa24.51■■□□□ 1.51
SWAP70-201ENST00000318950 SUPT5HO00267 1087 aaKnown RBP24.44■■□□□ 1.5
SWAP70-201ENST00000318950 DCAF8L2P0C7V8 631 aa24.12■■□□□ 1.45
SWAP70-201ENST00000318950 PCGF6Q9BYE7 350 aa23.53■■□□□ 1.36
SWAP70-201ENST00000318950 HRCP23327 699 aa23.32■■□□□ 1.32
SWAP70-201ENST00000318950 CHIC1Q5VXU3 224 aa23.27■■□□□ 1.32
SWAP70-201ENST00000318950 PPARGC1BQ86YN6 1023 aaKnown RBP23.05■■□□□ 1.28
SWAP70-201ENST00000318950 LOC105371045A0A1W2PR82 267 aa22.94■■□□□ 1.26
SWAP70-201ENST00000318950 EHMT2Q96KQ7 1210 aa22.92■■□□□ 1.26
SWAP70-201ENST00000318950 MYO15BQ96JP2 1530 aa22.81■■□□□ 1.24
SWAP70-201ENST00000318950 FAM9AQ8IZU1 332 aaPredicted RBP22.76■■□□□ 1.23
SWAP70-201ENST00000318950 ZCCHC6Q5VYS8 1495 aaKnown RBP22.74■■□□□ 1.23
SWAP70-201ENST00000318950 TRIM26Q12899 539 aaPredicted RBP22.65■■□□□ 1.22
SWAP70-201ENST00000318950 TRIM41Q8WV44 630 aa22.55■■□□□ 1.2
SWAP70-201ENST00000318950 ZEB1P37275 1124 aaPredicted RBP22.45■■□□□ 1.18
SWAP70-201ENST00000318950 DCAF1Q9Y4B6 1507 aa22.3■■□□□ 1.16
SWAP70-201ENST00000318950 CCDC180Q9P1Z9 1646 aa22.28■■□□□ 1.16
SWAP70-201ENST00000318950 TTBK1Q5TCY1 1321 aaPredicted RBP22.23■■□□□ 1.15
SWAP70-201ENST00000318950 CCER1Q8TC90 406 aaPredicted RBP22.13■■□□□ 1.13
SWAP70-201ENST00000318950 PELP1Q8IZL8 1130 aaKnown RBP22.07■■□□□ 1.12
SWAP70-201ENST00000318950 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.94■■□□□ 1.1
SWAP70-201ENST00000318950 CENPBP07199 599 aaPredicted RBP21.82■■□□□ 1.08
SWAP70-201ENST00000318950 SCAF1Q9H7N4 1312 aaKnown RBP21.75■■□□□ 1.07
SWAP70-201ENST00000318950 SCRIBQ14160 1630 aa21.72■■□□□ 1.07
SWAP70-201ENST00000318950 RSF1Q96T23 1441 aaPredicted RBP21.7■■□□□ 1.06
SWAP70-201ENST00000318950 UBTFP17480 764 aaKnown RBP21.68■■□□□ 1.06
SWAP70-201ENST00000318950 YTHDC1Q96MU7 727 aaKnown RBP21.67■■□□□ 1.06
SWAP70-201ENST00000318950 DIEXFQ68CQ4 756 aaKnown RBP21.66■■□□□ 1.06
SWAP70-201ENST00000318950 RANGAP1P46060 587 aaPredicted RBP21.55■■□□□ 1.04
SWAP70-201ENST00000318950 ACIN1Q9UKV3 1341 aaKnown RBP21.55■■□□□ 1.04
SWAP70-201ENST00000318950 GTF3C3Q9Y5Q9 886 aa21.54■■□□□ 1.04
SWAP70-201ENST00000318950 APLP2Q06481 763 aa21.51■■□□□ 1.03
SWAP70-201ENST00000318950 NEUROD1Q13562 356 aa21.48■■□□□ 1.03
SWAP70-201ENST00000318950 ABCC9O60706 1549 aa21.47■■□□□ 1.03
SWAP70-201ENST00000318950 HNRNPUL2Q1KMD3 747 aaKnown RBP21.42■■□□□ 1.02
SWAP70-201ENST00000318950 RB1CC1Q8TDY2 1594 aa21.42■■□□□ 1.02
SWAP70-201ENST00000318950 CECR2Q9BXF3 1484 aa21.27■■□□□ 1
SWAP70-201ENST00000318950 ZNF316A6NFI3 1004 aaPredicted RBP21.25■□□□□ 0.99
SWAP70-201ENST00000318950 CSRNP3Q8WYN3 585 aa21.17■□□□□ 0.98
SWAP70-201ENST00000318950 MYT1Q01538 1121 aa21.13■□□□□ 0.97
SWAP70-201ENST00000318950 MROH2BQ7Z745 1585 aa21.11■□□□□ 0.97
SWAP70-201ENST00000318950 CEP162Q5TB80 1403 aa21.04■□□□□ 0.96
SWAP70-201ENST00000318950 PABPN1Q86U42 306 aaKnown RBP eCLIP21■□□□□ 0.95
SWAP70-201ENST00000318950 MIER1Q8N108 512 aa20.99■□□□□ 0.95
SWAP70-201ENST00000318950 WIZO95785 1651 aa20.96■□□□□ 0.95
SWAP70-201ENST00000318950 ITGAEP38570 1179 aa20.94■□□□□ 0.94
SWAP70-201ENST00000318950 SOGA1O94964 1423 aa20.9■□□□□ 0.94
SWAP70-201ENST00000318950 ABCC8Q09428 1581 aa20.89■□□□□ 0.93
SWAP70-201ENST00000318950 NACADO15069 1562 aa20.88■□□□□ 0.93
SWAP70-201ENST00000318950 CCDC88BA6NC98 1476 aa20.88■□□□□ 0.93
SWAP70-201ENST00000318950 TNIKQ9UKE5 1360 aa20.87■□□□□ 0.93
SWAP70-201ENST00000318950 BAZ1AQ9NRL2 1556 aaPredicted RBP20.77■□□□□ 0.92
SWAP70-201ENST00000318950 ATP1B4Q9UN42 357 aaPredicted RBP20.76■□□□□ 0.91
SWAP70-201ENST00000318950 GOLGA3Q08378 1498 aa20.73■□□□□ 0.91
SWAP70-201ENST00000318950 CLIP1P30622 1438 aa20.71■□□□□ 0.91
SWAP70-201ENST00000318950 EEA1Q15075 1411 aa20.7■□□□□ 0.9
SWAP70-201ENST00000318950 WRNQ14191 1432 aaPredicted RBP eCLIP20.69■□□□□ 0.9
SWAP70-201ENST00000318950 RUSC2Q8N2Y8 1516 aa20.66■□□□□ 0.9
SWAP70-201ENST00000318950 BCANQ96GW7 911 aa20.62■□□□□ 0.89
SWAP70-201ENST00000318950 NEFLP07196 543 aa20.58■□□□□ 0.89
SWAP70-201ENST00000318950 TOP2AP11388 1531 aaKnown RBP20.55■□□□□ 0.88
SWAP70-201ENST00000318950 CEP164Q9UPV0 1460 aa20.53■□□□□ 0.88
SWAP70-201ENST00000318950 FAM50AQ14320 339 aaKnown RBP20.47■□□□□ 0.87
SWAP70-201ENST00000318950 VPS8Q8N3P4 1428 aa20.42■□□□□ 0.86
SWAP70-201ENST00000318950 SMARCA2P51531 1590 aa20.41■□□□□ 0.86
SWAP70-201ENST00000318950 SUPT16HQ9Y5B9 1047 aaKnown RBP20.39■□□□□ 0.86
SWAP70-201ENST00000318950 SMARCA4P51532 1647 aa20.39■□□□□ 0.85
SWAP70-201ENST00000318950 CLSPNQ9HAW4 1339 aa20.37■□□□□ 0.85
SWAP70-201ENST00000318950 DDX10Q13206 875 aaKnown RBP20.37■□□□□ 0.85
SWAP70-201ENST00000318950 FKBP8Q14318 412 aa20.34■□□□□ 0.85
SWAP70-201ENST00000318950 KANK4Q5T7N3 995 aaPredicted RBP20.33■□□□□ 0.85
SWAP70-201ENST00000318950 P3H3Q8IVL6 736 aa20.31■□□□□ 0.84
SWAP70-201ENST00000318950 ERICH6Q7L0X2 663 aa20.3■□□□□ 0.84
SWAP70-201ENST00000318950 RAPGEF2Q9Y4G8 1499 aa20.3■□□□□ 0.84
SWAP70-201ENST00000318950 HIRIP3Q9BW71 556 aaPredicted RBP20.28■□□□□ 0.84
SWAP70-201ENST00000318950 ANP32CO43423 234 aa20.24■□□□□ 0.83
SWAP70-201ENST00000318950 BAZ1BQ9UIG0 1483 aaKnown RBP20.23■□□□□ 0.83
SWAP70-201ENST00000318950 TRIM52Q96A61 297 aa20.22■□□□□ 0.83
SWAP70-201ENST00000318950 DHX57Q6P158 1386 aaKnown RBP20.21■□□□□ 0.83
SWAP70-201ENST00000318950 EIF4G1Q04637 1599 aaKnown RBP20.17■□□□□ 0.82
SWAP70-201ENST00000318950 KCNH8Q96L42 1107 aa20.17■□□□□ 0.82
SWAP70-201ENST00000318950 SIN3AQ96ST3 1273 aa20.16■□□□□ 0.82
SWAP70-201ENST00000318950 CCNB3Q8WWL7 1395 aa20.13■□□□□ 0.81
SWAP70-201ENST00000318950 TSHZ2Q9NRE2 1034 aa20.12■□□□□ 0.81
SWAP70-201ENST00000318950 SYNJ1O43426 1573 aa20.08■□□□□ 0.81
SWAP70-201ENST00000318950 CNGB1Q14028 1251 aaPredicted RBP20.08■□□□□ 0.8
SWAP70-201ENST00000318950 ANP32EQ9BTT0 268 aa20.08■□□□□ 0.8
SWAP70-201ENST00000318950 KIF21BO75037 1637 aa20.07■□□□□ 0.8
SWAP70-201ENST00000318950 KIF27Q86VH2 1401 aa20.05■□□□□ 0.8
SWAP70-201ENST00000318950 UNC13AQ9UPW8 1703 aa20.03■□□□□ 0.8
SWAP70-201ENST00000318950 RAB3GAP2Q9H2M9 1393 aa20.01■□□□□ 0.79
SWAP70-201ENST00000318950 TONSLQ96HA7 1378 aa19.99■□□□□ 0.79
SWAP70-201ENST00000318950 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
SWAP70-201ENST00000318950 HNRNPUQ00839 825 aaKnown RBP eCLIP19.98■□□□□ 0.79
SWAP70-201ENST00000318950 IRX6P78412 446 aaPredicted RBP19.98■□□□□ 0.79
SWAP70-201ENST00000318950 POLR3GLQ9BT43 218 aa19.96■□□□□ 0.79
SWAP70-201ENST00000318950 CDK11AQ9UQ88 783 aaPredicted RBP19.96■□□□□ 0.79
SWAP70-201ENST00000318950 BICRAQ9NZM4 1560 aa19.93■□□□□ 0.78
SWAP70-201ENST00000318950 SETD5Q9C0A6 1442 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms