RNA–Protein interactions for RNA: ENST00000318584.9

FKRP-201, Transcript of fukutin related protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FKRP, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-201ENST00000318584 NISCHQ9Y2I1 1504 aa29.6■■■□□ 2.33
FKRP-201ENST00000318584 SHROOM4Q9ULL8 1493 aa26.7■■□□□ 1.86
FKRP-201ENST00000318584 SUPT5HO00267 1087 aaKnown RBP26.51■■□□□ 1.83
FKRP-201ENST00000318584 DCAF8L2P0C7V8 631 aa25.82■■□□□ 1.72
FKRP-201ENST00000318584 PCGF6Q9BYE7 350 aa25.7■■□□□ 1.71
FKRP-201ENST00000318584 HRCP23327 699 aa25.64■■□□□ 1.69
FKRP-201ENST00000318584 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
FKRP-201ENST00000318584 PPARGC1BQ86YN6 1023 aaKnown RBP25.49■■□□□ 1.67
FKRP-201ENST00000318584 MYO15BQ96JP2 1530 aa25.4■■□□□ 1.66
FKRP-201ENST00000318584 LOC105371045A0A1W2PR82 267 aa25.2■■□□□ 1.63
FKRP-201ENST00000318584 CCDC180Q9P1Z9 1646 aa25.07■■□□□ 1.6
FKRP-201ENST00000318584 ZCCHC6Q5VYS8 1495 aaKnown RBP25.01■■□□□ 1.59
FKRP-201ENST00000318584 EHMT2Q96KQ7 1210 aa24.8■■□□□ 1.56
FKRP-201ENST00000318584 TRIM26Q12899 539 aaPredicted RBP24.68■■□□□ 1.54
FKRP-201ENST00000318584 FAM9AQ8IZU1 332 aaPredicted RBP24.65■■□□□ 1.54
FKRP-201ENST00000318584 ABCC9O60706 1549 aa24.64■■□□□ 1.53
FKRP-201ENST00000318584 DCAF1Q9Y4B6 1507 aa24.51■■□□□ 1.51
FKRP-201ENST00000318584 TRIM41Q8WV44 630 aa24.38■■□□□ 1.49
FKRP-201ENST00000318584 ZEB1P37275 1124 aaPredicted RBP24.23■■□□□ 1.47
FKRP-201ENST00000318584 SCAF1Q9H7N4 1312 aaKnown RBP24.11■■□□□ 1.45
FKRP-201ENST00000318584 TTBK1Q5TCY1 1321 aaPredicted RBP24.05■■□□□ 1.44
FKRP-201ENST00000318584 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.98■■□□□ 1.43
FKRP-201ENST00000318584 SCRIBQ14160 1630 aa23.93■■□□□ 1.42
FKRP-201ENST00000318584 PELP1Q8IZL8 1130 aaKnown RBP23.92■■□□□ 1.42
FKRP-201ENST00000318584 CCER1Q8TC90 406 aaPredicted RBP23.91■■□□□ 1.42
FKRP-201ENST00000318584 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
FKRP-201ENST00000318584 NEUROD1Q13562 356 aa23.69■■□□□ 1.38
FKRP-201ENST00000318584 PABPN1Q86U42 306 aaKnown RBP eCLIP23.66■■□□□ 1.38
FKRP-201ENST00000318584 ACIN1Q9UKV3 1341 aaKnown RBP23.63■■□□□ 1.37
FKRP-201ENST00000318584 RB1CC1Q8TDY2 1594 aa23.63■■□□□ 1.37
FKRP-201ENST00000318584 DIEXFQ68CQ4 756 aaKnown RBP23.6■■□□□ 1.37
FKRP-201ENST00000318584 GTF3C3Q9Y5Q9 886 aa23.59■■□□□ 1.37
FKRP-201ENST00000318584 NACADO15069 1562 aa23.56■■□□□ 1.36
FKRP-201ENST00000318584 YTHDC1Q96MU7 727 aaKnown RBP23.51■■□□□ 1.35
FKRP-201ENST00000318584 CENPBP07199 599 aaPredicted RBP23.48■■□□□ 1.35
FKRP-201ENST00000318584 CECR2Q9BXF3 1484 aa23.41■■□□□ 1.34
FKRP-201ENST00000318584 UBTFP17480 764 aaKnown RBP23.32■■□□□ 1.32
FKRP-201ENST00000318584 MROH2BQ7Z745 1585 aa23.23■■□□□ 1.31
FKRP-201ENST00000318584 HNRNPUL2Q1KMD3 747 aaKnown RBP23.21■■□□□ 1.31
FKRP-201ENST00000318584 RANGAP1P46060 587 aaPredicted RBP23.2■■□□□ 1.3
FKRP-201ENST00000318584 ZNF316A6NFI3 1004 aaPredicted RBP23.14■■□□□ 1.3
FKRP-201ENST00000318584 WIZO95785 1651 aa23.1■■□□□ 1.29
FKRP-201ENST00000318584 MIER1Q8N108 512 aa23.05■■□□□ 1.28
FKRP-201ENST00000318584 CEP162Q5TB80 1403 aa23.01■■□□□ 1.27
FKRP-201ENST00000318584 ABCC8Q09428 1581 aa22.99■■□□□ 1.27
FKRP-201ENST00000318584 CCDC88BA6NC98 1476 aa22.99■■□□□ 1.27
FKRP-201ENST00000318584 CSRNP3Q8WYN3 585 aa22.98■■□□□ 1.27
FKRP-201ENST00000318584 SOGA1O94964 1423 aa22.98■■□□□ 1.27
FKRP-201ENST00000318584 APLP2Q06481 763 aa22.88■■□□□ 1.25
FKRP-201ENST00000318584 UNC13AQ9UPW8 1703 aa22.85■■□□□ 1.25
FKRP-201ENST00000318584 RUSC2Q8N2Y8 1516 aa22.84■■□□□ 1.25
FKRP-201ENST00000318584 TNIKQ9UKE5 1360 aa22.79■■□□□ 1.24
FKRP-201ENST00000318584 MYT1Q01538 1121 aa22.76■■□□□ 1.23
FKRP-201ENST00000318584 WRNQ14191 1432 aaPredicted RBP eCLIP22.76■■□□□ 1.23
FKRP-201ENST00000318584 BAZ1AQ9NRL2 1556 aaPredicted RBP22.71■■□□□ 1.23
FKRP-201ENST00000318584 BICRAQ9NZM4 1560 aa22.71■■□□□ 1.23
FKRP-201ENST00000318584 ITGAEP38570 1179 aa22.57■■□□□ 1.2
FKRP-201ENST00000318584 SMARCA4P51532 1647 aa22.57■■□□□ 1.2
FKRP-201ENST00000318584 GOLGA3Q08378 1498 aa22.55■■□□□ 1.2
FKRP-201ENST00000318584 CLIP1P30622 1438 aa22.52■■□□□ 1.2
FKRP-201ENST00000318584 EIF4G1Q04637 1599 aaKnown RBP22.51■■□□□ 1.19
FKRP-201ENST00000318584 TOP2AP11388 1531 aaKnown RBP22.5■■□□□ 1.19
FKRP-201ENST00000318584 EEA1Q15075 1411 aa22.46■■□□□ 1.19
FKRP-201ENST00000318584 SMARCA2P51531 1590 aa22.46■■□□□ 1.19
FKRP-201ENST00000318584 BCANQ96GW7 911 aa22.41■■□□□ 1.18
FKRP-201ENST00000318584 SUPT16HQ9Y5B9 1047 aaKnown RBP22.41■■□□□ 1.18
FKRP-201ENST00000318584 CEP164Q9UPV0 1460 aa22.33■■□□□ 1.17
FKRP-201ENST00000318584 KANK4Q5T7N3 995 aaPredicted RBP22.32■■□□□ 1.16
FKRP-201ENST00000318584 BAZ1BQ9UIG0 1483 aaKnown RBP22.31■■□□□ 1.16
FKRP-201ENST00000318584 VPS8Q8N3P4 1428 aa22.31■■□□□ 1.16
FKRP-201ENST00000318584 KCNH8Q96L42 1107 aa22.31■■□□□ 1.16
FKRP-201ENST00000318584 ATAD2BQ9ULI0 1458 aa22.3■■□□□ 1.16
FKRP-201ENST00000318584 RAPGEF2Q9Y4G8 1499 aa22.28■■□□□ 1.16
FKRP-201ENST00000318584 DHX57Q6P158 1386 aaKnown RBP22.22■■□□□ 1.15
FKRP-201ENST00000318584 TSHZ2Q9NRE2 1034 aa22.18■■□□□ 1.14
FKRP-201ENST00000318584 HIRIP3Q9BW71 556 aaPredicted RBP22.16■■□□□ 1.14
FKRP-201ENST00000318584 ATP1B4Q9UN42 357 aaPredicted RBP22.15■■□□□ 1.14
FKRP-201ENST00000318584 DDX10Q13206 875 aaKnown RBP22.15■■□□□ 1.14
FKRP-201ENST00000318584 SYNJ1O43426 1573 aa22.15■■□□□ 1.14
FKRP-201ENST00000318584 FKBP8Q14318 412 aa22.12■■□□□ 1.13
FKRP-201ENST00000318584 KIF21BO75037 1637 aa22.08■■□□□ 1.13
FKRP-201ENST00000318584 CLSPNQ9HAW4 1339 aa22.04■■□□□ 1.12
FKRP-201ENST00000318584 SIN3AQ96ST3 1273 aa22.03■■□□□ 1.12
FKRP-201ENST00000318584 FAM50AQ14320 339 aaKnown RBP22.03■■□□□ 1.12
FKRP-201ENST00000318584 TRIM52Q96A61 297 aa22.03■■□□□ 1.12
FKRP-201ENST00000318584 ANP32EQ9BTT0 268 aa21.99■■□□□ 1.11
FKRP-201ENST00000318584 DNAJC5BQ9UF47 199 aa21.97■■□□□ 1.11
FKRP-201ENST00000318584 NEFLP07196 543 aa21.96■■□□□ 1.11
FKRP-201ENST00000318584 P3H3Q8IVL6 736 aa21.96■■□□□ 1.11
FKRP-201ENST00000318584 CCNB3Q8WWL7 1395 aa21.92■■□□□ 1.1
FKRP-201ENST00000318584 PEG3Q9GZU2 1588 aa21.9■■□□□ 1.1
FKRP-201ENST00000318584 NCAPD3P42695 1498 aa21.89■■□□□ 1.09
FKRP-201ENST00000318584 RAB3GAP2Q9H2M9 1393 aa21.87■■□□□ 1.09
FKRP-201ENST00000318584 ARAP1Q96P48 1450 aa21.87■■□□□ 1.09
FKRP-201ENST00000318584 CC2D2AQ9P2K1 1620 aa21.84■■□□□ 1.09
FKRP-201ENST00000318584 ANP32CO43423 234 aa21.8■■□□□ 1.08
FKRP-201ENST00000318584 IRX6P78412 446 aaPredicted RBP21.79■■□□□ 1.08
FKRP-201ENST00000318584 RBM19Q9Y4C8 960 aaKnown RBP21.77■■□□□ 1.08
FKRP-201ENST00000318584 RRBP1Q9P2E9 1410 aaKnown RBP21.74■■□□□ 1.07
FKRP-201ENST00000318584 PRXQ9BXM0 1461 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms