RNA–Protein interactions for RNA: ENST00000317276.8

PER1-201, Transcript of period circadian regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PER1, Length 4,707 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PER1-201ENST00000317276 NISCHQ9Y2I1 1504 aa28.7■■■□□ 2.19
PER1-201ENST00000317276 DCAF8L2P0C7V8 631 aa27.67■■■□□ 2.02
PER1-201ENST00000317276 SUPT5HO00267 1087 aaKnown RBP26.26■■□□□ 1.79
PER1-201ENST00000317276 SHROOM4Q9ULL8 1493 aa26.13■■□□□ 1.77
PER1-201ENST00000317276 EHMT2Q96KQ7 1210 aa24.71■■□□□ 1.55
PER1-201ENST00000317276 APLP2Q06481 763 aa24.69■■□□□ 1.54
PER1-201ENST00000317276 TRIM41Q8WV44 630 aa24.59■■□□□ 1.53
PER1-201ENST00000317276 FAM9AQ8IZU1 332 aaPredicted RBP24.56■■□□□ 1.52
PER1-201ENST00000317276 ABCC9O60706 1549 aa24.28■■□□□ 1.48
PER1-201ENST00000317276 UBTFP17480 764 aaKnown RBP24.08■■□□□ 1.44
PER1-201ENST00000317276 CCDC180Q9P1Z9 1646 aa24.06■■□□□ 1.44
PER1-201ENST00000317276 PCGF6Q9BYE7 350 aa24.02■■□□□ 1.44
PER1-201ENST00000317276 ZEB1P37275 1124 aaPredicted RBP23.9■■□□□ 1.42
PER1-201ENST00000317276 RANGAP1P46060 587 aaPredicted RBP23.89■■□□□ 1.41
PER1-201ENST00000317276 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
PER1-201ENST00000317276 ZCCHC6Q5VYS8 1495 aaKnown RBP23.86■■□□□ 1.41
PER1-201ENST00000317276 TTBK1Q5TCY1 1321 aaPredicted RBP23.86■■□□□ 1.41
PER1-201ENST00000317276 ATP1B4Q9UN42 357 aaPredicted RBP23.74■■□□□ 1.39
PER1-201ENST00000317276 PABPN1Q86U42 306 aaKnown RBP eCLIP23.71■■□□□ 1.39
PER1-201ENST00000317276 CCER1Q8TC90 406 aaPredicted RBP23.64■■□□□ 1.37
PER1-201ENST00000317276 PELP1Q8IZL8 1130 aaKnown RBP23.57■■□□□ 1.36
PER1-201ENST00000317276 TRIM26Q12899 539 aaPredicted RBP23.52■■□□□ 1.36
PER1-201ENST00000317276 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
PER1-201ENST00000317276 SCRIBQ14160 1630 aa23.4■■□□□ 1.34
PER1-201ENST00000317276 RB1CC1Q8TDY2 1594 aa23.24■■□□□ 1.31
PER1-201ENST00000317276 PPARGC1BQ86YN6 1023 aaKnown RBP23.23■■□□□ 1.31
PER1-201ENST00000317276 CENPBP07199 599 aaPredicted RBP23.19■■□□□ 1.3
PER1-201ENST00000317276 NACADO15069 1562 aa23.17■■□□□ 1.3
PER1-201ENST00000317276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.11■■□□□ 1.29
PER1-201ENST00000317276 HNRNPUL2Q1KMD3 747 aaKnown RBP23.11■■□□□ 1.29
PER1-201ENST00000317276 DCAF1Q9Y4B6 1507 aa23.08■■□□□ 1.29
PER1-201ENST00000317276 HRCP23327 699 aa22.99■■□□□ 1.27
PER1-201ENST00000317276 ITGAEP38570 1179 aa22.95■■□□□ 1.26
PER1-201ENST00000317276 CSRNP3Q8WYN3 585 aa22.92■■□□□ 1.26
PER1-201ENST00000317276 MYT1LQ9UL68 1186 aa22.79■■□□□ 1.24
PER1-201ENST00000317276 RSF1Q96T23 1441 aaPredicted RBP22.74■■□□□ 1.23
PER1-201ENST00000317276 FAM50AQ14320 339 aaKnown RBP22.66■■□□□ 1.22
PER1-201ENST00000317276 NEFLP07196 543 aa22.64■■□□□ 1.21
PER1-201ENST00000317276 BAZ1AQ9NRL2 1556 aaPredicted RBP22.58■■□□□ 1.2
PER1-201ENST00000317276 FBLN2P98095 1184 aa22.56■■□□□ 1.2
PER1-201ENST00000317276 MYO15BQ96JP2 1530 aa22.55■■□□□ 1.2
PER1-201ENST00000317276 YTHDC1Q96MU7 727 aaKnown RBP22.5■■□□□ 1.19
PER1-201ENST00000317276 BAZ1BQ9UIG0 1483 aaKnown RBP22.5■■□□□ 1.19
PER1-201ENST00000317276 EEA1Q15075 1411 aa22.48■■□□□ 1.19
PER1-201ENST00000317276 TRIM52Q96A61 297 aa22.43■■□□□ 1.18
PER1-201ENST00000317276 CDK11AQ9UQ88 783 aaPredicted RBP22.42■■□□□ 1.18
PER1-201ENST00000317276 P3H3Q8IVL6 736 aa22.37■■□□□ 1.17
PER1-201ENST00000317276 POLR3GLQ9BT43 218 aa22.35■■□□□ 1.17
PER1-201ENST00000317276 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.16
PER1-201ENST00000317276 CECR2Q9BXF3 1484 aa22.29■■□□□ 1.16
PER1-201ENST00000317276 DIEXFQ68CQ4 756 aaKnown RBP22.26■■□□□ 1.15
PER1-201ENST00000317276 ERICH6Q7L0X2 663 aa22.26■■□□□ 1.15
PER1-201ENST00000317276 NEUROD1Q13562 356 aa22.21■■□□□ 1.15
PER1-201ENST00000317276 GOLGA3Q08378 1498 aa22.2■■□□□ 1.14
PER1-201ENST00000317276 CLIP1P30622 1438 aa22.16■■□□□ 1.14
PER1-201ENST00000317276 KIF27Q86VH2 1401 aa22.13■■□□□ 1.13
PER1-201ENST00000317276 SMARCA2P51531 1590 aa22.12■■□□□ 1.13
PER1-201ENST00000317276 MROH2BQ7Z745 1585 aa22.1■■□□□ 1.13
PER1-201ENST00000317276 ARID3CA6NKF2 412 aa22.08■■□□□ 1.13
PER1-201ENST00000317276 CEP164Q9UPV0 1460 aa22.07■■□□□ 1.12
PER1-201ENST00000317276 CHMP7Q8WUX9 453 aaPredicted RBP22.04■■□□□ 1.12
PER1-201ENST00000317276 ZNF316A6NFI3 1004 aaPredicted RBP22.04■■□□□ 1.12
PER1-201ENST00000317276 ZNF777Q9ULD5 760 aaPredicted RBP22.03■■□□□ 1.12
PER1-201ENST00000317276 TNIKQ9UKE5 1360 aa22.03■■□□□ 1.12
PER1-201ENST00000317276 CEP162Q5TB80 1403 aa22.01■■□□□ 1.11
PER1-201ENST00000317276 MTUS2Q5JR59 1369 aa21.98■■□□□ 1.11
PER1-201ENST00000317276 NPM1P06748 294 aaKnown RBP eCLIP21.97■■□□□ 1.11
PER1-201ENST00000317276 SLC4A1APQ9BWU0 796 aaKnown RBP21.95■■□□□ 1.11
PER1-201ENST00000317276 ANP32CO43423 234 aa21.95■■□□□ 1.1
PER1-201ENST00000317276 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
PER1-201ENST00000317276 ZNF326Q5BKZ1 582 aaKnown RBP21.94■■□□□ 1.1
PER1-201ENST00000317276 TOP2AP11388 1531 aaKnown RBP21.92■■□□□ 1.1
PER1-201ENST00000317276 CNGB1Q14028 1251 aaPredicted RBP21.92■■□□□ 1.1
PER1-201ENST00000317276 ACIN1Q9UKV3 1341 aaKnown RBP21.86■■□□□ 1.09
PER1-201ENST00000317276 TONSLQ96HA7 1378 aa21.85■■□□□ 1.09
PER1-201ENST00000317276 ERCC6Q03468 1493 aa21.82■■□□□ 1.08
PER1-201ENST00000317276 TSPY4P0CV99 314 aa21.79■■□□□ 1.08
PER1-201ENST00000317276 TSPY10P0CW01 314 aa21.79■■□□□ 1.08
PER1-201ENST00000317276 WIZO95785 1651 aa21.76■■□□□ 1.07
PER1-201ENST00000317276 PDS5BQ9NTI5 1447 aa21.75■■□□□ 1.07
PER1-201ENST00000317276 SMARCA4P51532 1647 aa21.75■■□□□ 1.07
PER1-201ENST00000317276 CUX2O14529 1486 aa21.74■■□□□ 1.07
PER1-201ENST00000317276 CARMIL1Q5VZK9 1371 aa21.72■■□□□ 1.07
PER1-201ENST00000317276 ATAD2BQ9ULI0 1458 aa21.71■■□□□ 1.07
PER1-201ENST00000317276 PLEKHD1A6NEE1 506 aa21.71■■□□□ 1.07
PER1-201ENST00000317276 FHAD1B1AJZ9 1412 aa21.7■■□□□ 1.06
PER1-201ENST00000317276 SOGA1O94964 1423 aa21.68■■□□□ 1.06
PER1-201ENST00000317276 CHIC2Q9UKJ5 165 aa21.67■■□□□ 1.06
PER1-201ENST00000317276 ESF1Q9H501 851 aaKnown RBP21.67■■□□□ 1.06
PER1-201ENST00000317276 DAXXQ9UER7 740 aaPredicted RBP21.67■■□□□ 1.06
PER1-201ENST00000317276 CADPSQ9ULU8 1353 aa21.63■■□□□ 1.05
PER1-201ENST00000317276 ABCC8Q09428 1581 aa21.62■■□□□ 1.05
PER1-201ENST00000317276 BCANQ96GW7 911 aa21.54■■□□□ 1.04
PER1-201ENST00000317276 MYT1Q01538 1121 aa21.53■■□□□ 1.04
PER1-201ENST00000317276 VPS8Q8N3P4 1428 aa21.5■■□□□ 1.03
PER1-201ENST00000317276 CFDP1Q9UEE9 299 aaPredicted RBP21.5■■□□□ 1.03
PER1-201ENST00000317276 NEFMP07197 916 aa21.49■■□□□ 1.03
PER1-201ENST00000317276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.49■■□□□ 1.03
PER1-201ENST00000317276 STAG3Q9UJ98 1225 aa21.49■■□□□ 1.03
PER1-201ENST00000317276 CHGAP10645 457 aaKnown RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms