RNA–Protein interactions for RNA: ENST00000314797.10

COPG1-201, Transcript of coatomer protein complex subunit gamma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPG1, Length 3,078 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-201ENST00000314797 NISCHQ9Y2I1 1504 aa19.09■□□□□ 0.65
COPG1-201ENST00000314797 CCDC180Q9P1Z9 1646 aa16.68■□□□□ 0.26
COPG1-201ENST00000314797 ZCCHC6Q5VYS8 1495 aaKnown RBP16.09■□□□□ 0.17
COPG1-201ENST00000314797 DCAF1Q9Y4B6 1507 aa15.9■□□□□ 0.14
COPG1-201ENST00000314797 MYO15BQ96JP2 1530 aa15.68■□□□□ 0.1
COPG1-201ENST00000314797 NACADO15069 1562 aa15.45■□□□□ 0.06
COPG1-201ENST00000314797 ABCC9O60706 1549 aa15.4■□□□□ 0.06
COPG1-201ENST00000314797 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
COPG1-201ENST00000314797 DCAF8L2P0C7V8 631 aa15.37■□□□□ 0.05
COPG1-201ENST00000314797 RB1CC1Q8TDY2 1594 aa15.24■□□□□ 0.03
COPG1-201ENST00000314797 SCRIBQ14160 1630 aa15.18■□□□□ 0.02
COPG1-201ENST00000314797 UNC13AQ9UPW8 1703 aa15□□□□□ -0.01
COPG1-201ENST00000314797 SUPT5HO00267 1087 aaKnown RBP14.86□□□□□ -0.03
COPG1-201ENST00000314797 RSF1Q96T23 1441 aaPredicted RBP14.82□□□□□ -0.04
COPG1-201ENST00000314797 BICRAQ9NZM4 1560 aa14.82□□□□□ -0.04
COPG1-201ENST00000314797 CECR2Q9BXF3 1484 aa14.75□□□□□ -0.05
COPG1-201ENST00000314797 BAZ1AQ9NRL2 1556 aaPredicted RBP14.73□□□□□ -0.05
COPG1-201ENST00000314797 MROH2BQ7Z745 1585 aa14.71□□□□□ -0.05
COPG1-201ENST00000314797 SMARCA4P51532 1647 aa14.65□□□□□ -0.06
COPG1-201ENST00000314797 WIZO95785 1651 aa14.6□□□□□ -0.07
COPG1-201ENST00000314797 PEG3Q9GZU2 1588 aa14.57□□□□□ -0.08
COPG1-201ENST00000314797 TOP2AP11388 1531 aaKnown RBP14.5□□□□□ -0.09
COPG1-201ENST00000314797 PABPN1Q86U42 306 aaKnown RBP eCLIP14.48□□□□□ -0.096e-9■■□□□ 12
COPG1-201ENST00000314797 CHIC1Q5VXU3 224 aa14.44□□□□□ -0.1
COPG1-201ENST00000314797 EIF4G1Q04637 1599 aaKnown RBP14.39□□□□□ -0.11
COPG1-201ENST00000314797 SMARCA2P51531 1590 aa14.37□□□□□ -0.11
COPG1-201ENST00000314797 ATAD2BQ9ULI0 1458 aa14.35□□□□□ -0.11
COPG1-201ENST00000314797 CCDC88BA6NC98 1476 aa14.31□□□□□ -0.12
COPG1-201ENST00000314797 HMGXB3Q12766 1538 aa14.27□□□□□ -0.13
COPG1-201ENST00000314797 NCAPD3P42695 1498 aa14.24□□□□□ -0.13
COPG1-201ENST00000314797 BAZ1BQ9UIG0 1483 aaKnown RBP14.23□□□□□ -0.13
COPG1-201ENST00000314797 CC2D2AQ9P2K1 1620 aa14.05□□□□□ -0.16
COPG1-201ENST00000314797 TRIM41Q8WV44 630 aa14.04□□□□□ -0.16
COPG1-201ENST00000314797 ABCC8Q09428 1581 aa14□□□□□ -0.17
COPG1-201ENST00000314797 PRDM2Q13029 1718 aa13.98□□□□□ -0.17
COPG1-201ENST00000314797 CFTRP13569 1480 aa13.95□□□□□ -0.18
COPG1-201ENST00000314797 WRNQ14191 1432 aaPredicted RBP eCLIP13.91□□□□□ -0.185e-6■■■■■ 46
COPG1-201ENST00000314797 SYNJ1O43426 1573 aa13.9□□□□□ -0.18
COPG1-201ENST00000314797 BIVM-ERCC5R4GMW8 1640 aa13.89□□□□□ -0.19
COPG1-201ENST00000314797 TOP2BQ02880 1626 aa13.88□□□□□ -0.19
COPG1-201ENST00000314797 EEA1Q15075 1411 aa13.85□□□□□ -0.19
COPG1-201ENST00000314797 CADPSQ9ULU8 1353 aa13.82□□□□□ -0.2
COPG1-201ENST00000314797 LOC105371045A0A1W2PR82 267 aa13.8□□□□□ -0.2
COPG1-201ENST00000314797 CUX1P39880 1505 aa13.76□□□□□ -0.21
COPG1-201ENST00000314797 SOGA1O94964 1423 aa13.76□□□□□ -0.21
COPG1-201ENST00000314797 LAMC3Q9Y6N6 1575 aa13.74□□□□□ -0.21
COPG1-201ENST00000314797 RUSC2Q8N2Y8 1516 aa13.7□□□□□ -0.22
COPG1-201ENST00000314797 KIF21BO75037 1637 aa13.7□□□□□ -0.22
COPG1-201ENST00000314797 FAM9AQ8IZU1 332 aaPredicted RBP13.67□□□□□ -0.22
COPG1-201ENST00000314797 FANCD2Q9BXW9 1451 aa13.66□□□□□ -0.22
COPG1-201ENST00000314797 CSRNP3Q8WYN3 585 aa13.65□□□□□ -0.23
COPG1-201ENST00000314797 DNMBPQ6XZF7 1577 aa13.62□□□□□ -0.23
COPG1-201ENST00000314797 TNIKQ9UKE5 1360 aa13.61□□□□□ -0.23
COPG1-201ENST00000314797 GOLGA3Q08378 1498 aa13.61□□□□□ -0.23
COPG1-201ENST00000314797 CEP164Q9UPV0 1460 aa13.61□□□□□ -0.23
COPG1-201ENST00000314797 NESP48681 1621 aa13.61□□□□□ -0.23
COPG1-201ENST00000314797 ERICH3Q5RHP9 1530 aa13.58□□□□□ -0.24
COPG1-201ENST00000314797 PRXQ9BXM0 1461 aa13.56□□□□□ -0.24
COPG1-201ENST00000314797 FGD5Q6ZNL6 1462 aa13.55□□□□□ -0.24
COPG1-201ENST00000314797 PDS5BQ9NTI5 1447 aa13.55□□□□□ -0.24
COPG1-201ENST00000314797 TOPBP1Q92547 1522 aa13.55□□□□□ -0.24
COPG1-201ENST00000314797 KIF27Q86VH2 1401 aa13.54□□□□□ -0.24
COPG1-201ENST00000314797 DNAJC5BQ9UF47 199 aa13.53□□□□□ -0.24
COPG1-201ENST00000314797 KIF21AQ7Z4S6 1674 aa13.53□□□□□ -0.24
COPG1-201ENST00000314797 WDR97A6NE52 1622 aa13.51□□□□□ -0.25
COPG1-201ENST00000314797 URB2Q14146 1524 aaKnown RBP13.51□□□□□ -0.25
COPG1-201ENST00000314797 CEP162Q5TB80 1403 aa13.5□□□□□ -0.25
COPG1-201ENST00000314797 ABCA10Q8WWZ4 1543 aa13.5□□□□□ -0.25
COPG1-201ENST00000314797 RAPGEF2Q9Y4G8 1499 aa13.49□□□□□ -0.25
COPG1-201ENST00000314797 POLA1P09884 1462 aaPredicted RBP13.49□□□□□ -0.25
COPG1-201ENST00000314797 CUX2O14529 1486 aa13.44□□□□□ -0.26
COPG1-201ENST00000314797 IGF1RP08069 1367 aa13.43□□□□□ -0.26
COPG1-201ENST00000314797 ABCA5Q8WWZ7 1642 aa13.41□□□□□ -0.26
COPG1-201ENST00000314797 TARBP1Q13395 1621 aaKnown RBP13.4□□□□□ -0.26
COPG1-201ENST00000314797 CUL7Q14999 1698 aa13.39□□□□□ -0.27
COPG1-201ENST00000314797 MRC2Q9UBG0 1479 aa13.39□□□□□ -0.27
COPG1-201ENST00000314797 RAD54L2Q9Y4B4 1467 aa13.39□□□□□ -0.27
COPG1-201ENST00000314797 WDR62O43379 1518 aa13.38□□□□□ -0.27
COPG1-201ENST00000314797 UBTFP17480 764 aaKnown RBP13.37□□□□□ -0.27
COPG1-201ENST00000314797 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
COPG1-201ENST00000314797 TRIM26Q12899 539 aaPredicted RBP13.36□□□□□ -0.27
COPG1-201ENST00000314797 CLIP1P30622 1438 aa13.35□□□□□ -0.27
COPG1-201ENST00000314797 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
COPG1-201ENST00000314797 THOC2Q8NI27 1593 aaKnown RBP13.31□□□□□ -0.28
COPG1-201ENST00000314797 VPS8Q8N3P4 1428 aa13.3□□□□□ -0.28
COPG1-201ENST00000314797 PCGF6Q9BYE7 350 aa13.28□□□□□ -0.28
COPG1-201ENST00000314797 GAPVD1Q14C86 1478 aa13.28□□□□□ -0.28
COPG1-201ENST00000314797 ARAP1Q96P48 1450 aa13.28□□□□□ -0.28
COPG1-201ENST00000314797 PBRM1Q86U86 1689 aa13.27□□□□□ -0.29
COPG1-201ENST00000314797 CTTNBP2Q8WZ74 1663 aa13.26□□□□□ -0.29
COPG1-201ENST00000314797 IFT140Q96RY7 1462 aa13.26□□□□□ -0.29
COPG1-201ENST00000314797 ARHGAP35Q9NRY4 1499 aa13.24□□□□□ -0.29
COPG1-201ENST00000314797 TDRD9Q8NDG6 1382 aaKnown RBP13.2□□□□□ -0.3
COPG1-201ENST00000314797 ADAMTS12P58397 1594 aa13.19□□□□□ -0.3
COPG1-201ENST00000314797 EFCAB5A4FU69 1503 aa13.19□□□□□ -0.3
COPG1-201ENST00000314797 ERCC6Q03468 1493 aa13.18□□□□□ -0.3
COPG1-201ENST00000314797 GRIN2BQ13224 1484 aa13.17□□□□□ -0.3
COPG1-201ENST00000314797 MAP3K1Q13233 1512 aa13.16□□□□□ -0.3
COPG1-201ENST00000314797 FHAD1B1AJZ9 1412 aa13.16□□□□□ -0.3
COPG1-201ENST00000314797 SAMD9Q5K651 1589 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms