RNA–Protein interactions for RNA: ENST00000310624.6

NEFH-201, Transcript of neurofilament heavy, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEFH, Length 3,783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFH-201ENST00000310624 NISCHQ9Y2I1 1504 aa26.6■■□□□ 1.85
NEFH-201ENST00000310624 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
NEFH-201ENST00000310624 SHROOM4Q9ULL8 1493 aa24.34■■□□□ 1.49
NEFH-201ENST00000310624 SUPT5HO00267 1087 aaKnown RBP24.22■■□□□ 1.47
NEFH-201ENST00000310624 EHMT2Q96KQ7 1210 aa23.47■■□□□ 1.35
NEFH-201ENST00000310624 PCGF6Q9BYE7 350 aa23.22■■□□□ 1.31
NEFH-201ENST00000310624 FAM9AQ8IZU1 332 aaPredicted RBP22.81■■□□□ 1.24
NEFH-201ENST00000310624 PELP1Q8IZL8 1130 aaKnown RBP22.7■■□□□ 1.22
NEFH-201ENST00000310624 CHIC1Q5VXU3 224 aa22.68■■□□□ 1.22
NEFH-201ENST00000310624 PPARGC1BQ86YN6 1023 aaKnown RBP22.68■■□□□ 1.22
NEFH-201ENST00000310624 TTBK1Q5TCY1 1321 aaPredicted RBP22.65■■□□□ 1.22
NEFH-201ENST00000310624 HRCP23327 699 aa22.53■■□□□ 1.2
NEFH-201ENST00000310624 LOC105371045A0A1W2PR82 267 aa22.5■■□□□ 1.19
NEFH-201ENST00000310624 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
NEFH-201ENST00000310624 TRIM41Q8WV44 630 aa22.25■■□□□ 1.15
NEFH-201ENST00000310624 MYO15BQ96JP2 1530 aa21.98■■□□□ 1.11
NEFH-201ENST00000310624 MYT1Q01538 1121 aa21.97■■□□□ 1.11
NEFH-201ENST00000310624 RANGAP1P46060 587 aaPredicted RBP21.95■■□□□ 1.1
NEFH-201ENST00000310624 CCER1Q8TC90 406 aaPredicted RBP21.91■■□□□ 1.1
NEFH-201ENST00000310624 YTHDC1Q96MU7 727 aaKnown RBP21.86■■□□□ 1.09
NEFH-201ENST00000310624 CCDC180Q9P1Z9 1646 aa21.84■■□□□ 1.09
NEFH-201ENST00000310624 TRIM26Q12899 539 aaPredicted RBP21.83■■□□□ 1.09
NEFH-201ENST00000310624 ABCC9O60706 1549 aa21.8■■□□□ 1.08
NEFH-201ENST00000310624 SCAF1Q9H7N4 1312 aaKnown RBP21.73■■□□□ 1.07
NEFH-201ENST00000310624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.6■■□□□ 1.05
NEFH-201ENST00000310624 ZEB1P37275 1124 aaPredicted RBP21.59■■□□□ 1.05
NEFH-201ENST00000310624 SCRIBQ14160 1630 aa21.54■■□□□ 1.04
NEFH-201ENST00000310624 UBTFP17480 764 aaKnown RBP21.51■■□□□ 1.03
NEFH-201ENST00000310624 CENPBP07199 599 aaPredicted RBP21.49■■□□□ 1.03
NEFH-201ENST00000310624 APLP2Q06481 763 aa21.43■■□□□ 1.02
NEFH-201ENST00000310624 PABPN1Q86U42 306 aaKnown RBP eCLIP21.42■■□□□ 1.02
NEFH-201ENST00000310624 GTF3C3Q9Y5Q9 886 aa21.41■■□□□ 1.02
NEFH-201ENST00000310624 RSF1Q96T23 1441 aaPredicted RBP21.36■■□□□ 1.01
NEFH-201ENST00000310624 DCAF1Q9Y4B6 1507 aa21.3■■□□□ 1
NEFH-201ENST00000310624 HNRNPUL2Q1KMD3 747 aaKnown RBP21.27■■□□□ 1
NEFH-201ENST00000310624 DIEXFQ68CQ4 756 aaKnown RBP21.16■□□□□ 0.98
NEFH-201ENST00000310624 NEUROD1Q13562 356 aa21.16■□□□□ 0.98
NEFH-201ENST00000310624 ACIN1Q9UKV3 1341 aaKnown RBP21.13■□□□□ 0.97
NEFH-201ENST00000310624 CECR2Q9BXF3 1484 aa21.12■□□□□ 0.97
NEFH-201ENST00000310624 ITGAEP38570 1179 aa21.1■□□□□ 0.97
NEFH-201ENST00000310624 ATP1B4Q9UN42 357 aaPredicted RBP21.09■□□□□ 0.97
NEFH-201ENST00000310624 RB1CC1Q8TDY2 1594 aa20.95■□□□□ 0.94
NEFH-201ENST00000310624 CSRNP3Q8WYN3 585 aa20.89■□□□□ 0.93
NEFH-201ENST00000310624 MROH2BQ7Z745 1585 aa20.85■□□□□ 0.93
NEFH-201ENST00000310624 CNGB1Q14028 1251 aaPredicted RBP20.76■□□□□ 0.91
NEFH-201ENST00000310624 BCANQ96GW7 911 aa20.74■□□□□ 0.91
NEFH-201ENST00000310624 BCL11AQ9H165 835 aa20.74■□□□□ 0.91
NEFH-201ENST00000310624 NACADO15069 1562 aa20.72■□□□□ 0.91
NEFH-201ENST00000310624 WIZO95785 1651 aa20.62■□□□□ 0.89
NEFH-201ENST00000310624 ERICH6Q7L0X2 663 aa20.58■□□□□ 0.88
NEFH-201ENST00000310624 SOGA1O94964 1423 aa20.57■□□□□ 0.88
NEFH-201ENST00000310624 NEFLP07196 543 aa20.55■□□□□ 0.88
NEFH-201ENST00000310624 ZNF316A6NFI3 1004 aaPredicted RBP20.55■□□□□ 0.88
NEFH-201ENST00000310624 ABCC8Q09428 1581 aa20.54■□□□□ 0.88
NEFH-201ENST00000310624 CCDC88BA6NC98 1476 aa20.52■□□□□ 0.88
NEFH-201ENST00000310624 CEP162Q5TB80 1403 aa20.51■□□□□ 0.87
NEFH-201ENST00000310624 BAZ1AQ9NRL2 1556 aaPredicted RBP20.47■□□□□ 0.87
NEFH-201ENST00000310624 MIER1Q8N108 512 aa20.41■□□□□ 0.86
NEFH-201ENST00000310624 POLR3GLQ9BT43 218 aa20.4■□□□□ 0.86
NEFH-201ENST00000310624 P3H3Q8IVL6 736 aa20.37■□□□□ 0.85
NEFH-201ENST00000310624 WRNQ14191 1432 aaPredicted RBP eCLIP20.36■□□□□ 0.85
NEFH-201ENST00000310624 RUSC2Q8N2Y8 1516 aa20.33■□□□□ 0.85
NEFH-201ENST00000310624 TNIKQ9UKE5 1360 aa20.32■□□□□ 0.84
NEFH-201ENST00000310624 CLIP1P30622 1438 aa20.29■□□□□ 0.84
NEFH-201ENST00000310624 FAM50AQ14320 339 aaKnown RBP20.28■□□□□ 0.84
NEFH-201ENST00000310624 ANP32EQ9BTT0 268 aa20.26■□□□□ 0.83
NEFH-201ENST00000310624 GOLGA3Q08378 1498 aa20.21■□□□□ 0.83
NEFH-201ENST00000310624 HIRIP3Q9BW71 556 aaPredicted RBP20.21■□□□□ 0.83
NEFH-201ENST00000310624 EEA1Q15075 1411 aa20.15■□□□□ 0.82
NEFH-201ENST00000310624 TOP2AP11388 1531 aaKnown RBP20.15■□□□□ 0.82
NEFH-201ENST00000310624 BAZ1BQ9UIG0 1483 aaKnown RBP20.14■□□□□ 0.82
NEFH-201ENST00000310624 PRKCSHP14314 528 aaPredicted RBP20.1■□□□□ 0.81
NEFH-201ENST00000310624 SMARCA4P51532 1647 aa20.09■□□□□ 0.81
NEFH-201ENST00000310624 DDX10Q13206 875 aaKnown RBP20.08■□□□□ 0.8
NEFH-201ENST00000310624 FKBP8Q14318 412 aa20.07■□□□□ 0.8
NEFH-201ENST00000310624 TRIM52Q96A61 297 aa20.07■□□□□ 0.8
NEFH-201ENST00000310624 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
NEFH-201ENST00000310624 KANK4Q5T7N3 995 aaPredicted RBP20.04■□□□□ 0.8
NEFH-201ENST00000310624 ARID3CA6NKF2 412 aa20.02■□□□□ 0.8
NEFH-201ENST00000310624 SMARCA2P51531 1590 aa20.02■□□□□ 0.79
NEFH-201ENST00000310624 IRX6P78412 446 aaPredicted RBP19.97■□□□□ 0.79
NEFH-201ENST00000310624 SENP3-EIF4A1A0A087X0R7 540 aa19.96■□□□□ 0.79
NEFH-201ENST00000310624 RAPGEF2Q9Y4G8 1499 aa19.94■□□□□ 0.78
NEFH-201ENST00000310624 ATAD2BQ9ULI0 1458 aa19.91■□□□□ 0.78
NEFH-201ENST00000310624 ANP32CO43423 234 aa19.89■□□□□ 0.77
NEFH-201ENST00000310624 VPS8Q8N3P4 1428 aa19.88■□□□□ 0.77
NEFH-201ENST00000310624 ZNF326Q5BKZ1 582 aaKnown RBP19.88■□□□□ 0.77
NEFH-201ENST00000310624 TSHZ2Q9NRE2 1034 aa19.82■□□□□ 0.76
NEFH-201ENST00000310624 SUPT16HQ9Y5B9 1047 aaKnown RBP19.82■□□□□ 0.76
NEFH-201ENST00000310624 KIF27Q86VH2 1401 aa19.82■□□□□ 0.76
NEFH-201ENST00000310624 SIN3AQ96ST3 1273 aa19.79■□□□□ 0.76
NEFH-201ENST00000310624 HNRNPUQ00839 825 aaKnown RBP eCLIP19.75■□□□□ 0.75
NEFH-201ENST00000310624 CHIC2Q9UKJ5 165 aa19.73■□□□□ 0.75
NEFH-201ENST00000310624 CDK11AQ9UQ88 783 aaPredicted RBP19.71■□□□□ 0.75
NEFH-201ENST00000310624 FAM9BQ8IZU0 186 aa19.69■□□□□ 0.74
NEFH-201ENST00000310624 CUX2O14529 1486 aa19.69■□□□□ 0.74
NEFH-201ENST00000310624 SYNJ1O43426 1573 aa19.69■□□□□ 0.74
NEFH-201ENST00000310624 EIF5BO60841 1220 aaKnown RBP19.68■□□□□ 0.74
NEFH-201ENST00000310624 NBR1Q14596 966 aa19.67■□□□□ 0.74
NEFH-201ENST00000310624 RTN4Q9NQC3 1192 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms