RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 DNAJC5BQ9UF47 199 aa3.48□□□□□ -1.85
CEP290-201ENST00000309041 AEBP2Q6ZN18 517 aaPredicted RBP3.15□□□□□ -1.9
CEP290-201ENST00000309041 CHIC1Q5VXU3 224 aa3.1□□□□□ -1.91
CEP290-201ENST00000309041 PHF23Q9BUL5 403 aaPredicted RBP3.07□□□□□ -1.92
CEP290-201ENST00000309041 ERICH6Q7L0X2 663 aa2.99□□□□□ -1.93
CEP290-201ENST00000309041 AMER1Q5JTC6 1135 aaPredicted RBP2.89□□□□□ -1.95
CEP290-201ENST00000309041 PCGF6Q9BYE7 350 aa2.87□□□□□ -1.95
CEP290-201ENST00000309041 DNAJC5Q9H3Z4 198 aa2.85□□□□□ -1.95
CEP290-201ENST00000309041 PROM2Q8N271 834 aa2.83□□□□□ -1.96
CEP290-201ENST00000309041 DAXXQ9UER7 740 aaPredicted RBP2.77□□□□□ -1.97
CEP290-201ENST00000309041 PELP1Q8IZL8 1130 aaKnown RBP2.75□□□□□ -1.97
CEP290-201ENST00000309041 SENP3Q9H4L4 574 aaPredicted RBP2.72□□□□□ -1.97
CEP290-201ENST00000309041 PPARGC1BQ86YN6 1023 aaKnown RBP2.7□□□□□ -1.98
CEP290-201ENST00000309041 SHROOM4Q9ULL8 1493 aa2.68□□□□□ -1.98
CEP290-201ENST00000309041 EHMT2Q96KQ7 1210 aa2.66□□□□□ -1.98
CEP290-201ENST00000309041 SLC4A1APQ9BWU0 796 aaKnown RBP2.66□□□□□ -1.98
CEP290-201ENST00000309041 ZBTB22O15209 634 aa2.64□□□□□ -1.99
CEP290-201ENST00000309041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.64□□□□□ -1.99
CEP290-201ENST00000309041 MYO15BQ96JP2 1530 aa2.64□□□□□ -1.99
CEP290-201ENST00000309041 RBM10P98175 930 aaKnown RBP2.62□□□□□ -1.99
CEP290-201ENST00000309041 APLP2Q06481 763 aa2.62□□□□□ -1.99
CEP290-201ENST00000309041 CSRNP3Q8WYN3 585 aa2.61□□□□□ -1.99
CEP290-201ENST00000309041 HNRNPUL2Q1KMD3 747 aaKnown RBP2.6□□□□□ -1.99
CEP290-201ENST00000309041 TTBK1Q5TCY1 1321 aaPredicted RBP2.57□□□□□ -2
CEP290-201ENST00000309041 NCBP3Q53F19 620 aaKnown RBP2.51□□□□□ -2.01
CEP290-201ENST00000309041 TMX1Q9H3N1 280 aa2.51□□□□□ -2.01
CEP290-201ENST00000309041 ATXN8OSP0DMR3 200 aa2.5□□□□□ -2.01
CEP290-201ENST00000309041 ARXQ96QS3 562 aa2.5□□□□□ -2.01
CEP290-201ENST00000309041 SCAF1Q9H7N4 1312 aaKnown RBP2.49□□□□□ -2.01
CEP290-201ENST00000309041 PLPPR3Q6T4P5 718 aa2.48□□□□□ -2.01
CEP290-201ENST00000309041 NPM2Q86SE8 214 aaKnown RBP2.47□□□□□ -2.01
CEP290-201ENST00000309041 POTEDQ86YR6 584 aa2.47□□□□□ -2.01
CEP290-201ENST00000309041 NBR1Q14596 966 aa2.46□□□□□ -2.02
CEP290-201ENST00000309041 TAOK2Q9UL54 1235 aa2.45□□□□□ -2.02
CEP290-201ENST00000309041 TRIM41Q8WV44 630 aa2.45□□□□□ -2.02
CEP290-201ENST00000309041 PPP6R1Q9UPN7 881 aa2.44□□□□□ -2.02
CEP290-201ENST00000309041 CCDC180Q9P1Z9 1646 aa2.44□□□□□ -2.02
CEP290-201ENST00000309041 CENPBP07199 599 aaPredicted RBP2.43□□□□□ -2.02
CEP290-201ENST00000309041 DCAF1Q9Y4B6 1507 aa2.42□□□□□ -2.02
CEP290-201ENST00000309041 HMGB2P26583 209 aaKnown RBP2.41□□□□□ -2.02
CEP290-201ENST00000309041 ZBTB47Q9UFB7 747 aaPredicted RBP2.41□□□□□ -2.02
CEP290-201ENST00000309041 PDE4CQ08493 712 aa2.4□□□□□ -2.03
CEP290-201ENST00000309041 KCNA4P22459 653 aa2.4□□□□□ -2.03
CEP290-201ENST00000309041 PPP4R3CPQ6ZMV5 832 aa2.4□□□□□ -2.03
CEP290-201ENST00000309041 CLCN6P51797 869 aa2.39□□□□□ -2.03
CEP290-201ENST00000309041 TRIM52Q96A61 297 aa2.39□□□□□ -2.03
CEP290-201ENST00000309041 IGSF5Q9NSI5 407 aa2.38□□□□□ -2.03
CEP290-201ENST00000309041 ITGAEP38570 1179 aa2.38□□□□□ -2.03
CEP290-201ENST00000309041 RYDENQ9NUL5 291 aaKnown RBP2.37□□□□□ -2.03
CEP290-201ENST00000309041 SLC4A2P04920 1241 aa2.36□□□□□ -2.03
CEP290-201ENST00000309041 POLD1P28340 1107 aa2.35□□□□□ -2.03
CEP290-201ENST00000309041 ILDR1Q86SU0 546 aaPredicted RBP2.35□□□□□ -2.03
CEP290-201ENST00000309041 FOXD1Q16676 465 aa2.33□□□□□ -2.04
CEP290-201ENST00000309041 SOCS7O14512 581 aa2.32□□□□□ -2.04
CEP290-201ENST00000309041 PATL2C9JE40 543 aaKnown RBP2.32□□□□□ -2.04
CEP290-201ENST00000309041 RYR1P21817 5038 aa2.32□□□□□ -2.04
CEP290-201ENST00000309041 HOXD11P31277 338 aaPredicted RBP2.31□□□□□ -2.04
CEP290-201ENST00000309041 MYT1Q01538 1121 aa2.31□□□□□ -2.04
CEP290-201ENST00000309041 ONECUT3O60422 494 aaPredicted RBP2.31□□□□□ -2.04
CEP290-201ENST00000309041 BAZ1BQ9UIG0 1483 aaKnown RBP2.31□□□□□ -2.04
CEP290-201ENST00000309041 ZBTB12Q9Y330 459 aaPredicted RBP2.3□□□□□ -2.04
CEP290-201ENST00000309041 CANXP27824 592 aaKnown RBP2.3□□□□□ -2.04
CEP290-201ENST00000309041 RTL5Q5HYW3 569 aaPredicted RBP2.3□□□□□ -2.04
CEP290-201ENST00000309041 FBXO3Q9UK99 471 aa2.28□□□□□ -2.04
CEP290-201ENST00000309041 PEG3Q9GZU2 1588 aa2.28□□□□□ -2.05
CEP290-201ENST00000309041 YTHDC1Q96MU7 727 aaKnown RBP2.27□□□□□ -2.05
CEP290-201ENST00000309041 PLCB2Q00722 1185 aa2.27□□□□□ -2.05
CEP290-201ENST00000309041 CCDC125Q86Z20 511 aa2.27□□□□□ -2.05
CEP290-201ENST00000309041 ARIH1Q9Y4X5 557 aaPredicted RBP2.26□□□□□ -2.05
CEP290-201ENST00000309041 ARID3AQ99856 593 aa2.26□□□□□ -2.05
CEP290-201ENST00000309041 ADRA2BP18089 450 aa2.26□□□□□ -2.05
CEP290-201ENST00000309041 RANGAP1P46060 587 aaPredicted RBP2.25□□□□□ -2.05
CEP290-201ENST00000309041 STAG3Q9UJ98 1225 aa2.25□□□□□ -2.05
CEP290-201ENST00000309041 KDM2AQ9Y2K7 1162 aa2.25□□□□□ -2.05
CEP290-201ENST00000309041 ZNF316A6NFI3 1004 aaPredicted RBP2.24□□□□□ -2.05
CEP290-201ENST00000309041 MSH5O43196 834 aa2.24□□□□□ -2.05
CEP290-201ENST00000309041 RTN4Q9NQC3 1192 aaKnown RBP2.24□□□□□ -2.05
CEP290-201ENST00000309041 B4GALNT3Q6L9W6 998 aa2.23□□□□□ -2.05
CEP290-201ENST00000309041 ZNF592Q92610 1267 aa2.23□□□□□ -2.05
CEP290-201ENST00000309041 EIF4EBP3O60516 100 aaPredicted RBP2.23□□□□□ -2.05
CEP290-201ENST00000309041 MNX1P50219 401 aaPredicted RBP2.23□□□□□ -2.05
CEP290-201ENST00000309041 HMGB1P09429 215 aaKnown RBP2.23□□□□□ -2.05
CEP290-201ENST00000309041 TRIM26Q12899 539 aaPredicted RBP2.22□□□□□ -2.05
CEP290-201ENST00000309041 NPM3O75607 178 aaKnown RBP2.21□□□□□ -2.06
CEP290-201ENST00000309041 PKD2Q13563 968 aa2.2□□□□□ -2.06
CEP290-201ENST00000309041 SGIP1Q9BQI5 828 aa2.2□□□□□ -2.06
CEP290-201ENST00000309041 BCL11AQ9H165 835 aa2.2□□□□□ -2.06
CEP290-201ENST00000309041 MKRN4PQ13434 485 aaPredicted RBP2.19□□□□□ -2.06
CEP290-201ENST00000309041 UBTFP17480 764 aaKnown RBP2.19□□□□□ -2.06
CEP290-201ENST00000309041 FGD1P98174 961 aa2.19□□□□□ -2.06
CEP290-201ENST00000309041 SLC24A1O60721 1099 aa2.18□□□□□ -2.06
CEP290-201ENST00000309041 ARID3CA6NKF2 412 aa2.18□□□□□ -2.06
CEP290-201ENST00000309041 FKBP8Q14318 412 aa2.17□□□□□ -2.06
CEP290-201ENST00000309041 SAMD1Q6SPF0 538 aaPredicted RBP2.16□□□□□ -2.06
CEP290-201ENST00000309041 EIF4G1Q04637 1599 aaKnown RBP2.16□□□□□ -2.06
CEP290-201ENST00000309041 SKAP1Q86WV1 359 aa2.16□□□□□ -2.06
CEP290-201ENST00000309041 SRPK2P78362 688 aaKnown RBP2.15□□□□□ -2.06
CEP290-201ENST00000309041 POTEHQ6S545 545 aa2.15□□□□□ -2.06
CEP290-201ENST00000309041 CCDC97Q96F63 343 aaPredicted RBP2.15□□□□□ -2.07
CEP290-201ENST00000309041 HMGB1P1B2RPK0 211 aaPredicted RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms