RNA–Protein interactions for RNA: ENST00000307360.5

PCDHA10-201, Transcript of protocadherin alpha 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA10, Length 5,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA10-201ENST00000307360 DCAF8L2P0C7V8 631 aa26.86■■□□□ 1.89
PCDHA10-201ENST00000307360 NISCHQ9Y2I1 1504 aa26.72■■□□□ 1.87
PCDHA10-201ENST00000307360 SUPT5HO00267 1087 aaKnown RBP25.53■■□□□ 1.68
PCDHA10-201ENST00000307360 SHROOM4Q9ULL8 1493 aa25.08■■□□□ 1.61
PCDHA10-201ENST00000307360 PELP1Q8IZL8 1130 aaKnown RBP24.59■■□□□ 1.53
PCDHA10-201ENST00000307360 EHMT2Q96KQ7 1210 aa24.58■■□□□ 1.52
PCDHA10-201ENST00000307360 APLP2Q06481 763 aa24.52■■□□□ 1.52
PCDHA10-201ENST00000307360 FAM9AQ8IZU1 332 aaPredicted RBP24.2■■□□□ 1.46
PCDHA10-201ENST00000307360 PCGF6Q9BYE7 350 aa23.96■■□□□ 1.43
PCDHA10-201ENST00000307360 TTBK1Q5TCY1 1321 aaPredicted RBP23.79■■□□□ 1.4
PCDHA10-201ENST00000307360 ZEB1P37275 1124 aaPredicted RBP23.76■■□□□ 1.39
PCDHA10-201ENST00000307360 TRIM41Q8WV44 630 aa23.74■■□□□ 1.39
PCDHA10-201ENST00000307360 CENPBP07199 599 aaPredicted RBP23.66■■□□□ 1.38
PCDHA10-201ENST00000307360 RANGAP1P46060 587 aaPredicted RBP23.58■■□□□ 1.37
PCDHA10-201ENST00000307360 CCER1Q8TC90 406 aaPredicted RBP23.58■■□□□ 1.36
PCDHA10-201ENST00000307360 ATP1B4Q9UN42 357 aaPredicted RBP23.49■■□□□ 1.35
PCDHA10-201ENST00000307360 UBTFP17480 764 aaKnown RBP23.48■■□□□ 1.35
PCDHA10-201ENST00000307360 ERICH6Q7L0X2 663 aa23.43■■□□□ 1.34
PCDHA10-201ENST00000307360 NEFLP07196 543 aa23.2■■□□□ 1.3
PCDHA10-201ENST00000307360 CHIC1Q5VXU3 224 aa23.19■■□□□ 1.3
PCDHA10-201ENST00000307360 HRCP23327 699 aa23.17■■□□□ 1.3
PCDHA10-201ENST00000307360 TRIM26Q12899 539 aaPredicted RBP23.14■■□□□ 1.3
PCDHA10-201ENST00000307360 LOC105371045A0A1W2PR82 267 aa22.94■■□□□ 1.26
PCDHA10-201ENST00000307360 YTHDC1Q96MU7 727 aaKnown RBP22.94■■□□□ 1.26
PCDHA10-201ENST00000307360 PPARGC1BQ86YN6 1023 aaKnown RBP22.86■■□□□ 1.25
PCDHA10-201ENST00000307360 MYT1Q01538 1121 aa22.79■■□□□ 1.24
PCDHA10-201ENST00000307360 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.7■■□□□ 1.22
PCDHA10-201ENST00000307360 HNRNPUL2Q1KMD3 747 aaKnown RBP22.7■■□□□ 1.22
PCDHA10-201ENST00000307360 ITGAEP38570 1179 aa22.66■■□□□ 1.22
PCDHA10-201ENST00000307360 MYT1LQ9UL68 1186 aa22.65■■□□□ 1.22
PCDHA10-201ENST00000307360 POLR3GLQ9BT43 218 aa22.54■■□□□ 1.2
PCDHA10-201ENST00000307360 DAXXQ9UER7 740 aaPredicted RBP22.52■■□□□ 1.2
PCDHA10-201ENST00000307360 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
PCDHA10-201ENST00000307360 CCDC180Q9P1Z9 1646 aa22.26■■□□□ 1.15
PCDHA10-201ENST00000307360 CNGB1Q14028 1251 aaPredicted RBP22.2■■□□□ 1.14
PCDHA10-201ENST00000307360 DIEXFQ68CQ4 756 aaKnown RBP22.19■■□□□ 1.14
PCDHA10-201ENST00000307360 ABCC9O60706 1549 aa22.18■■□□□ 1.14
PCDHA10-201ENST00000307360 FAM50AQ14320 339 aaKnown RBP22.15■■□□□ 1.14
PCDHA10-201ENST00000307360 SLC4A1APQ9BWU0 796 aaKnown RBP22.14■■□□□ 1.14
PCDHA10-201ENST00000307360 TRIM52Q96A61 297 aa22.06■■□□□ 1.12
PCDHA10-201ENST00000307360 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
PCDHA10-201ENST00000307360 CLSPNQ9HAW4 1339 aa22.01■■□□□ 1.11
PCDHA10-201ENST00000307360 PABPN1Q86U42 306 aaKnown RBP eCLIP22■■□□□ 1.11
PCDHA10-201ENST00000307360 ZNF316A6NFI3 1004 aaPredicted RBP21.96■■□□□ 1.11
PCDHA10-201ENST00000307360 RTL5Q5HYW3 569 aaPredicted RBP21.96■■□□□ 1.11
PCDHA10-201ENST00000307360 NEUROD1Q13562 356 aa21.92■■□□□ 1.1
PCDHA10-201ENST00000307360 ANP32CO43423 234 aa21.84■■□□□ 1.09
PCDHA10-201ENST00000307360 CSRNP3Q8WYN3 585 aa21.81■■□□□ 1.08
PCDHA10-201ENST00000307360 GTF3C3Q9Y5Q9 886 aa21.76■■□□□ 1.07
PCDHA10-201ENST00000307360 ZNF326Q5BKZ1 582 aaKnown RBP21.75■■□□□ 1.07
PCDHA10-201ENST00000307360 SCRIBQ14160 1630 aa21.75■■□□□ 1.07
PCDHA10-201ENST00000307360 FBLN2P98095 1184 aa21.7■■□□□ 1.06
PCDHA10-201ENST00000307360 ZBTB47Q9UFB7 747 aaPredicted RBP21.68■■□□□ 1.06
PCDHA10-201ENST00000307360 ACIN1Q9UKV3 1341 aaKnown RBP21.64■■□□□ 1.06
PCDHA10-201ENST00000307360 CDK11AQ9UQ88 783 aaPredicted RBP21.64■■□□□ 1.05
PCDHA10-201ENST00000307360 MYO15BQ96JP2 1530 aa21.6■■□□□ 1.05
PCDHA10-201ENST00000307360 BCANQ96GW7 911 aa21.59■■□□□ 1.05
PCDHA10-201ENST00000307360 NEFMP07197 916 aa21.56■■□□□ 1.04
PCDHA10-201ENST00000307360 CANXP27824 592 aaKnown RBP21.52■■□□□ 1.04
PCDHA10-201ENST00000307360 P3H3Q8IVL6 736 aa21.51■■□□□ 1.03
PCDHA10-201ENST00000307360 RSF1Q96T23 1441 aaPredicted RBP21.41■■□□□ 1.02
PCDHA10-201ENST00000307360 ZNF777Q9ULD5 760 aaPredicted RBP21.41■■□□□ 1.02
PCDHA10-201ENST00000307360 ARID3CA6NKF2 412 aa21.4■■□□□ 1.02
PCDHA10-201ENST00000307360 SLC24A1O60721 1099 aa21.36■■□□□ 1.01
PCDHA10-201ENST00000307360 EEA1Q15075 1411 aa21.34■■□□□ 1.01
PCDHA10-201ENST00000307360 TONSLQ96HA7 1378 aa21.3■■□□□ 1
PCDHA10-201ENST00000307360 ANP32AP39687 249 aaKnown RBP21.3■■□□□ 1
PCDHA10-201ENST00000307360 NACADO15069 1562 aa21.29■■□□□ 1
PCDHA10-201ENST00000307360 ESF1Q9H501 851 aaKnown RBP21.25■□□□□ 0.99
PCDHA10-201ENST00000307360 RB1CC1Q8TDY2 1594 aa21.25■□□□□ 0.99
PCDHA10-201ENST00000307360 BCL11AQ9H165 835 aa21.22■□□□□ 0.99
PCDHA10-201ENST00000307360 CLIP1P30622 1438 aa21.15■□□□□ 0.98
PCDHA10-201ENST00000307360 NPM1P06748 294 aaKnown RBP eCLIP21.14■□□□□ 0.98
PCDHA10-201ENST00000307360 STAG3Q9UJ98 1225 aa21.13■□□□□ 0.97
PCDHA10-201ENST00000307360 CHGAP10645 457 aaKnown RBP21.13■□□□□ 0.97
PCDHA10-201ENST00000307360 CEP162Q5TB80 1403 aa21.12■□□□□ 0.97
PCDHA10-201ENST00000307360 SCAF1Q9H7N4 1312 aaKnown RBP21.11■□□□□ 0.97
PCDHA10-201ENST00000307360 GOLGA3Q08378 1498 aa21.1■□□□□ 0.97
PCDHA10-201ENST00000307360 HNRNPUQ00839 825 aaKnown RBP eCLIP21.09■□□□□ 0.97
PCDHA10-201ENST00000307360 FKBP8Q14318 412 aa21.06■□□□□ 0.96
PCDHA10-201ENST00000307360 NPM2Q86SE8 214 aaKnown RBP21.06■□□□□ 0.96
PCDHA10-201ENST00000307360 DDX10Q13206 875 aaKnown RBP21.05■□□□□ 0.96
PCDHA10-201ENST00000307360 UPF2Q9HAU5 1272 aaKnown RBP21.05■□□□□ 0.96
PCDHA10-201ENST00000307360 TNIKQ9UKE5 1360 aa21.02■□□□□ 0.96
PCDHA10-201ENST00000307360 TSPY4P0CV99 314 aa21.01■□□□□ 0.95
PCDHA10-201ENST00000307360 TSPY10P0CW01 314 aa21.01■□□□□ 0.95
PCDHA10-201ENST00000307360 FAM9BQ8IZU0 186 aa21.01■□□□□ 0.95
PCDHA10-201ENST00000307360 MIER1Q8N108 512 aa21■□□□□ 0.95
PCDHA10-201ENST00000307360 ANP32BQ92688 251 aaKnown RBP21■□□□□ 0.95
PCDHA10-201ENST00000307360 HSP90AA1P07900 732 aaKnown RBP20.99■□□□□ 0.95
PCDHA10-201ENST00000307360 TMC1Q8TDI8 760 aa20.99■□□□□ 0.95
PCDHA10-201ENST00000307360 BAZ1AQ9NRL2 1556 aaPredicted RBP20.98■□□□□ 0.95
PCDHA10-201ENST00000307360 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.98■□□□□ 0.95
PCDHA10-201ENST00000307360 CHIC2Q9UKJ5 165 aa20.98■□□□□ 0.95
PCDHA10-201ENST00000307360 WRNQ14191 1432 aaPredicted RBP eCLIP20.97■□□□□ 0.95
PCDHA10-201ENST00000307360 MTUS2Q5JR59 1369 aa20.96■□□□□ 0.95
PCDHA10-201ENST00000307360 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.93■□□□□ 0.94
PCDHA10-201ENST00000307360 CEP164Q9UPV0 1460 aa20.91■□□□□ 0.94
PCDHA10-201ENST00000307360 WDR43Q15061 677 aaKnown RBP eCLIP20.91■□□□□ 0.94
PCDHA10-201ENST00000307360 CCDC136Q96JN2 1154 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms