RNA–Protein interactions for RNA: ENST00000304400.11

PAM-201, Transcript of peptidylglycine alpha-amidating monooxygenase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAM, Length 3,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM-201ENST00000304400 NISCHQ9Y2I1 1504 aa27.33■■□□□ 1.97
PAM-201ENST00000304400 SHROOM4Q9ULL8 1493 aa24.65■■□□□ 1.54
PAM-201ENST00000304400 SUPT5HO00267 1087 aaKnown RBP24.43■■□□□ 1.5
PAM-201ENST00000304400 PCGF6Q9BYE7 350 aa23.73■■□□□ 1.39
PAM-201ENST00000304400 HRCP23327 699 aa23.7■■□□□ 1.38
PAM-201ENST00000304400 DCAF8L2P0C7V8 631 aa23.69■■□□□ 1.38
PAM-201ENST00000304400 PPARGC1BQ86YN6 1023 aaKnown RBP23.62■■□□□ 1.37
PAM-201ENST00000304400 MYO15BQ96JP2 1530 aa23.59■■□□□ 1.37
PAM-201ENST00000304400 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
PAM-201ENST00000304400 LOC105371045A0A1W2PR82 267 aa23.27■■□□□ 1.32
PAM-201ENST00000304400 ZCCHC6Q5VYS8 1495 aaKnown RBP23.12■■□□□ 1.29
PAM-201ENST00000304400 CCDC180Q9P1Z9 1646 aa22.91■■□□□ 1.26
PAM-201ENST00000304400 EHMT2Q96KQ7 1210 aa22.87■■□□□ 1.25
PAM-201ENST00000304400 TRIM26Q12899 539 aaPredicted RBP22.75■■□□□ 1.23
PAM-201ENST00000304400 FAM9AQ8IZU1 332 aaPredicted RBP22.71■■□□□ 1.23
PAM-201ENST00000304400 DCAF1Q9Y4B6 1507 aa22.67■■□□□ 1.22
PAM-201ENST00000304400 TRIM41Q8WV44 630 aa22.42■■□□□ 1.18
PAM-201ENST00000304400 SCAF1Q9H7N4 1312 aaKnown RBP22.36■■□□□ 1.17
PAM-201ENST00000304400 ZEB1P37275 1124 aaPredicted RBP22.29■■□□□ 1.16
PAM-201ENST00000304400 TTBK1Q5TCY1 1321 aaPredicted RBP22.19■■□□□ 1.14
PAM-201ENST00000304400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.14■■□□□ 1.14
PAM-201ENST00000304400 PELP1Q8IZL8 1130 aaKnown RBP22.07■■□□□ 1.12
PAM-201ENST00000304400 CCER1Q8TC90 406 aaPredicted RBP22.02■■□□□ 1.12
PAM-201ENST00000304400 RSF1Q96T23 1441 aaPredicted RBP22■■□□□ 1.11
PAM-201ENST00000304400 SCRIBQ14160 1630 aa21.95■■□□□ 1.1
PAM-201ENST00000304400 ABCC9O60706 1549 aa21.94■■□□□ 1.1
PAM-201ENST00000304400 NEUROD1Q13562 356 aa21.93■■□□□ 1.1
PAM-201ENST00000304400 RB1CC1Q8TDY2 1594 aa21.91■■□□□ 1.1
PAM-201ENST00000304400 ACIN1Q9UKV3 1341 aaKnown RBP21.83■■□□□ 1.09
PAM-201ENST00000304400 GTF3C3Q9Y5Q9 886 aa21.81■■□□□ 1.08
PAM-201ENST00000304400 DIEXFQ68CQ4 756 aaKnown RBP21.77■■□□□ 1.08
PAM-201ENST00000304400 YTHDC1Q96MU7 727 aaKnown RBP21.71■■□□□ 1.07
PAM-201ENST00000304400 CECR2Q9BXF3 1484 aa21.63■■□□□ 1.05
PAM-201ENST00000304400 CENPBP07199 599 aaPredicted RBP21.62■■□□□ 1.05
PAM-201ENST00000304400 MROH2BQ7Z745 1585 aa21.48■■□□□ 1.03
PAM-201ENST00000304400 UBTFP17480 764 aaKnown RBP21.43■■□□□ 1.02
PAM-201ENST00000304400 NACADO15069 1562 aa21.42■■□□□ 1.02
PAM-201ENST00000304400 WIZO95785 1651 aa21.4■■□□□ 1.02
PAM-201ENST00000304400 HNRNPUL2Q1KMD3 747 aaKnown RBP21.39■■□□□ 1.01
PAM-201ENST00000304400 RANGAP1P46060 587 aaPredicted RBP21.35■■□□□ 1.01
PAM-201ENST00000304400 ZNF316A6NFI3 1004 aaPredicted RBP21.33■■□□□ 1.01
PAM-201ENST00000304400 MIER1Q8N108 512 aa21.29■■□□□ 1
PAM-201ENST00000304400 ABCC8Q09428 1581 aa21.29■■□□□ 1
PAM-201ENST00000304400 CEP162Q5TB80 1403 aa21.26■□□□□ 0.99
PAM-201ENST00000304400 CCDC88BA6NC98 1476 aa21.25■□□□□ 0.99
PAM-201ENST00000304400 SOGA1O94964 1423 aa21.22■□□□□ 0.99
PAM-201ENST00000304400 CSRNP3Q8WYN3 585 aa21.13■□□□□ 0.97
PAM-201ENST00000304400 RUSC2Q8N2Y8 1516 aa21.13■□□□□ 0.97
PAM-201ENST00000304400 WRNQ14191 1432 aaPredicted RBP eCLIP21.02■□□□□ 0.96
PAM-201ENST00000304400 TNIKQ9UKE5 1360 aa21.01■□□□□ 0.95
PAM-201ENST00000304400 BAZ1AQ9NRL2 1556 aaPredicted RBP20.99■□□□□ 0.95
PAM-201ENST00000304400 APLP2Q06481 763 aa20.97■□□□□ 0.95
PAM-201ENST00000304400 MYT1Q01538 1121 aa20.97■□□□□ 0.95
PAM-201ENST00000304400 EIF4G1Q04637 1599 aaKnown RBP20.91■□□□□ 0.94
PAM-201ENST00000304400 PABPN1Q86U42 306 aaKnown RBP eCLIP20.87■□□□□ 0.93
PAM-201ENST00000304400 GOLGA3Q08378 1498 aa20.81■□□□□ 0.92
PAM-201ENST00000304400 UNC13AQ9UPW8 1703 aa20.79■□□□□ 0.92
PAM-201ENST00000304400 SMARCA2P51531 1590 aa20.79■□□□□ 0.92
PAM-201ENST00000304400 TOP2AP11388 1531 aaKnown RBP20.79■□□□□ 0.92
PAM-201ENST00000304400 ITGAEP38570 1179 aa20.78■□□□□ 0.92
PAM-201ENST00000304400 CLIP1P30622 1438 aa20.77■□□□□ 0.92
PAM-201ENST00000304400 SUPT16HQ9Y5B9 1047 aaKnown RBP20.72■□□□□ 0.91
PAM-201ENST00000304400 BCANQ96GW7 911 aa20.71■□□□□ 0.91
PAM-201ENST00000304400 EEA1Q15075 1411 aa20.68■□□□□ 0.9
PAM-201ENST00000304400 SMARCA4P51532 1647 aa20.68■□□□□ 0.9
PAM-201ENST00000304400 KCNH8Q96L42 1107 aa20.65■□□□□ 0.9
PAM-201ENST00000304400 BICRAQ9NZM4 1560 aa20.61■□□□□ 0.89
PAM-201ENST00000304400 CEP164Q9UPV0 1460 aa20.59■□□□□ 0.89
PAM-201ENST00000304400 VPS8Q8N3P4 1428 aa20.59■□□□□ 0.89
PAM-201ENST00000304400 RAPGEF2Q9Y4G8 1499 aa20.59■□□□□ 0.89
PAM-201ENST00000304400 KANK4Q5T7N3 995 aaPredicted RBP20.59■□□□□ 0.89
PAM-201ENST00000304400 DHX57Q6P158 1386 aaKnown RBP20.53■□□□□ 0.88
PAM-201ENST00000304400 TSHZ2Q9NRE2 1034 aa20.53■□□□□ 0.88
PAM-201ENST00000304400 SYNJ1O43426 1573 aa20.52■□□□□ 0.87
PAM-201ENST00000304400 HIRIP3Q9BW71 556 aaPredicted RBP20.46■□□□□ 0.87
PAM-201ENST00000304400 KIF21BO75037 1637 aa20.42■□□□□ 0.86
PAM-201ENST00000304400 DDX10Q13206 875 aaKnown RBP20.41■□□□□ 0.86
PAM-201ENST00000304400 FKBP8Q14318 412 aa20.41■□□□□ 0.86
PAM-201ENST00000304400 ATP1B4Q9UN42 357 aaPredicted RBP20.34■□□□□ 0.85
PAM-201ENST00000304400 TRIM52Q96A61 297 aa20.34■□□□□ 0.85
PAM-201ENST00000304400 ANP32EQ9BTT0 268 aa20.33■□□□□ 0.85
PAM-201ENST00000304400 SIN3AQ96ST3 1273 aa20.32■□□□□ 0.84
PAM-201ENST00000304400 CLSPNQ9HAW4 1339 aa20.28■□□□□ 0.84
PAM-201ENST00000304400 FAM50AQ14320 339 aaKnown RBP20.26■□□□□ 0.83
PAM-201ENST00000304400 BAZ1BQ9UIG0 1483 aaKnown RBP20.25■□□□□ 0.83
PAM-201ENST00000304400 ARAP1Q96P48 1450 aa20.22■□□□□ 0.83
PAM-201ENST00000304400 P3H3Q8IVL6 736 aa20.21■□□□□ 0.83
PAM-201ENST00000304400 CCNB3Q8WWL7 1395 aa20.21■□□□□ 0.83
PAM-201ENST00000304400 NEFLP07196 543 aa20.19■□□□□ 0.82
PAM-201ENST00000304400 RAB3GAP2Q9H2M9 1393 aa20.19■□□□□ 0.82
PAM-201ENST00000304400 IRX6P78412 446 aaPredicted RBP20.14■□□□□ 0.82
PAM-201ENST00000304400 ATAD2BQ9ULI0 1458 aa20.14■□□□□ 0.81
PAM-201ENST00000304400 BCL11AQ9H165 835 aa20.12■□□□□ 0.81
PAM-201ENST00000304400 RBM19Q9Y4C8 960 aaKnown RBP20.11■□□□□ 0.81
PAM-201ENST00000304400 RRBP1Q9P2E9 1410 aaKnown RBP20.08■□□□□ 0.81
PAM-201ENST00000304400 ANP32CO43423 234 aa20.05■□□□□ 0.8
PAM-201ENST00000304400 PRXQ9BXM0 1461 aa20.04■□□□□ 0.8
PAM-201ENST00000304400 WDR97A6NE52 1622 aa20.03■□□□□ 0.8
PAM-201ENST00000304400 TOP2BQ02880 1626 aa20.01■□□□□ 0.79
PAM-201ENST00000304400 ARHGAP35Q9NRY4 1499 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms