RNA–Protein interactions for RNA: ENST00000302243.11

DDX19A-201, Transcript of DEAD-box helicase 19A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX19A, Length 2,997 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX19A-201ENST00000302243 NISCHQ9Y2I1 1504 aa24.65■■□□□ 1.54
DDX19A-201ENST00000302243 CCDC180Q9P1Z9 1646 aa21.2■□□□□ 0.98
DDX19A-201ENST00000302243 ZCCHC6Q5VYS8 1495 aaKnown RBP20.73■□□□□ 0.91
DDX19A-201ENST00000302243 SHROOM4Q9ULL8 1493 aa20.69■□□□□ 0.9
DDX19A-201ENST00000302243 DCAF8L2P0C7V8 631 aa20.67■□□□□ 0.9
DDX19A-201ENST00000302243 ABCC9O60706 1549 aa20.18■□□□□ 0.82
DDX19A-201ENST00000302243 DCAF1Q9Y4B6 1507 aa20.18■□□□□ 0.82
DDX19A-201ENST00000302243 SUPT5HO00267 1087 aaKnown RBP20.01■□□□□ 0.79
DDX19A-201ENST00000302243 SCRIBQ14160 1630 aa19.84■□□□□ 0.77
DDX19A-201ENST00000302243 MYO15BQ96JP2 1530 aa19.78■□□□□ 0.76
DDX19A-201ENST00000302243 NACADO15069 1562 aa19.72■□□□□ 0.75
DDX19A-201ENST00000302243 RB1CC1Q8TDY2 1594 aa19.54■□□□□ 0.72
DDX19A-201ENST00000302243 CECR2Q9BXF3 1484 aa19.31■□□□□ 0.68
DDX19A-201ENST00000302243 RSF1Q96T23 1441 aaPredicted RBP19.3■□□□□ 0.68
DDX19A-201ENST00000302243 UNC13AQ9UPW8 1703 aa19.3■□□□□ 0.68
DDX19A-201ENST00000302243 PABPN1Q86U42 306 aaKnown RBP eCLIP19.2■□□□□ 0.66
DDX19A-201ENST00000302243 MROH2BQ7Z745 1585 aa19.17■□□□□ 0.66
DDX19A-201ENST00000302243 CHIC1Q5VXU3 224 aa19.16■□□□□ 0.66
DDX19A-201ENST00000302243 BICRAQ9NZM4 1560 aa19.06■□□□□ 0.64
DDX19A-201ENST00000302243 WIZO95785 1651 aa19.05■□□□□ 0.64
DDX19A-201ENST00000302243 BAZ1AQ9NRL2 1556 aaPredicted RBP18.96■□□□□ 0.63
DDX19A-201ENST00000302243 SMARCA4P51532 1647 aa18.9■□□□□ 0.62
DDX19A-201ENST00000302243 TOP2AP11388 1531 aaKnown RBP18.69■□□□□ 0.58
DDX19A-201ENST00000302243 TRIM41Q8WV44 630 aa18.63■□□□□ 0.57
DDX19A-201ENST00000302243 CCDC88BA6NC98 1476 aa18.62■□□□□ 0.57
DDX19A-201ENST00000302243 LOC105371045A0A1W2PR82 267 aa18.61■□□□□ 0.57
DDX19A-201ENST00000302243 SMARCA2P51531 1590 aa18.6■□□□□ 0.57
DDX19A-201ENST00000302243 ATAD2BQ9ULI0 1458 aa18.55■□□□□ 0.56
DDX19A-201ENST00000302243 FAM9AQ8IZU1 332 aaPredicted RBP18.54■□□□□ 0.56
DDX19A-201ENST00000302243 PEG3Q9GZU2 1588 aa18.52■□□□□ 0.56
DDX19A-201ENST00000302243 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
DDX19A-201ENST00000302243 BAZ1BQ9UIG0 1483 aaKnown RBP18.46■□□□□ 0.55
DDX19A-201ENST00000302243 ABCC8Q09428 1581 aa18.43■□□□□ 0.54
DDX19A-201ENST00000302243 EHMT2Q96KQ7 1210 aa18.43■□□□□ 0.54
DDX19A-201ENST00000302243 NCAPD3P42695 1498 aa18.26■□□□□ 0.51
DDX19A-201ENST00000302243 HMGXB3Q12766 1538 aa18.2■□□□□ 0.5
DDX19A-201ENST00000302243 CC2D2AQ9P2K1 1620 aa18.15■□□□□ 0.5
DDX19A-201ENST00000302243 WRNQ14191 1432 aaPredicted RBP eCLIP18.14■□□□□ 0.49
DDX19A-201ENST00000302243 SOGA1O94964 1423 aa18.13■□□□□ 0.49
DDX19A-201ENST00000302243 SYNJ1O43426 1573 aa18.1■□□□□ 0.49
DDX19A-201ENST00000302243 RUSC2Q8N2Y8 1516 aa18.1■□□□□ 0.49
DDX19A-201ENST00000302243 PCGF6Q9BYE7 350 aa18■□□□□ 0.47
DDX19A-201ENST00000302243 CFTRP13569 1480 aa17.96■□□□□ 0.47
DDX19A-201ENST00000302243 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
DDX19A-201ENST00000302243 DNAJC5BQ9UF47 199 aa17.94■□□□□ 0.46
DDX19A-201ENST00000302243 TOP2BQ02880 1626 aa17.89■□□□□ 0.45
DDX19A-201ENST00000302243 CADPSQ9ULU8 1353 aa17.88■□□□□ 0.45
DDX19A-201ENST00000302243 CUX1P39880 1505 aa17.87■□□□□ 0.45
DDX19A-201ENST00000302243 UBTFP17480 764 aaKnown RBP17.85■□□□□ 0.45
DDX19A-201ENST00000302243 EEA1Q15075 1411 aa17.85■□□□□ 0.45
DDX19A-201ENST00000302243 PPARGC1BQ86YN6 1023 aaKnown RBP17.85■□□□□ 0.45
DDX19A-201ENST00000302243 BIVM-ERCC5R4GMW8 1640 aa17.84■□□□□ 0.45
DDX19A-201ENST00000302243 NESP48681 1621 aa17.83■□□□□ 0.44
DDX19A-201ENST00000302243 PRDM2Q13029 1718 aa17.8■□□□□ 0.44
DDX19A-201ENST00000302243 CEP162Q5TB80 1403 aa17.75■□□□□ 0.43
DDX19A-201ENST00000302243 GOLGA3Q08378 1498 aa17.75■□□□□ 0.43
DDX19A-201ENST00000302243 TNIKQ9UKE5 1360 aa17.74■□□□□ 0.43
DDX19A-201ENST00000302243 TRIM26Q12899 539 aaPredicted RBP17.73■□□□□ 0.43
DDX19A-201ENST00000302243 FANCD2Q9BXW9 1451 aa17.72■□□□□ 0.43
DDX19A-201ENST00000302243 RANGAP1P46060 587 aaPredicted RBP17.71■□□□□ 0.43
DDX19A-201ENST00000302243 RAPGEF2Q9Y4G8 1499 aa17.71■□□□□ 0.43
DDX19A-201ENST00000302243 CEP164Q9UPV0 1460 aa17.7■□□□□ 0.42
DDX19A-201ENST00000302243 TTBK1Q5TCY1 1321 aaPredicted RBP17.68■□□□□ 0.42
DDX19A-201ENST00000302243 KIF21BO75037 1637 aa17.67■□□□□ 0.42
DDX19A-201ENST00000302243 FGD5Q6ZNL6 1462 aa17.64■□□□□ 0.41
DDX19A-201ENST00000302243 KIF27Q86VH2 1401 aa17.61■□□□□ 0.41
DDX19A-201ENST00000302243 CUX2O14529 1486 aa17.6■□□□□ 0.41
DDX19A-201ENST00000302243 LAMC3Q9Y6N6 1575 aa17.57■□□□□ 0.4
DDX19A-201ENST00000302243 PRXQ9BXM0 1461 aa17.56■□□□□ 0.4
DDX19A-201ENST00000302243 RAD54L2Q9Y4B4 1467 aa17.56■□□□□ 0.4
DDX19A-201ENST00000302243 HRCP23327 699 aa17.56■□□□□ 0.4
DDX19A-201ENST00000302243 TOPBP1Q92547 1522 aa17.55■□□□□ 0.4
DDX19A-201ENST00000302243 CLIP1P30622 1438 aa17.54■□□□□ 0.4
DDX19A-201ENST00000302243 DNMBPQ6XZF7 1577 aa17.52■□□□□ 0.4
DDX19A-201ENST00000302243 URB2Q14146 1524 aaKnown RBP17.51■□□□□ 0.39
DDX19A-201ENST00000302243 POLA1P09884 1462 aaPredicted RBP17.5■□□□□ 0.39
DDX19A-201ENST00000302243 KIF21AQ7Z4S6 1674 aa17.5■□□□□ 0.39
DDX19A-201ENST00000302243 IGF1RP08069 1367 aa17.5■□□□□ 0.39
DDX19A-201ENST00000302243 ERICH3Q5RHP9 1530 aa17.47■□□□□ 0.39
DDX19A-201ENST00000302243 PDS5BQ9NTI5 1447 aa17.47■□□□□ 0.39
DDX19A-201ENST00000302243 CARMIL1Q5VZK9 1371 aa17.41■□□□□ 0.38
DDX19A-201ENST00000302243 ABCA10Q8WWZ4 1543 aa17.39■□□□□ 0.37
DDX19A-201ENST00000302243 TDRD9Q8NDG6 1382 aaKnown RBP17.38■□□□□ 0.37
DDX19A-201ENST00000302243 VPS8Q8N3P4 1428 aa17.37■□□□□ 0.37
DDX19A-201ENST00000302243 ARAP1Q96P48 1450 aa17.34■□□□□ 0.37
DDX19A-201ENST00000302243 WDR97A6NE52 1622 aa17.3■□□□□ 0.36
DDX19A-201ENST00000302243 ARHGAP35Q9NRY4 1499 aa17.29■□□□□ 0.36
DDX19A-201ENST00000302243 APLP2Q06481 763 aa17.27■□□□□ 0.36
DDX19A-201ENST00000302243 P3H3Q8IVL6 736 aa17.27■□□□□ 0.35
DDX19A-201ENST00000302243 MRC2Q9UBG0 1479 aa17.25■□□□□ 0.35
DDX19A-201ENST00000302243 GAPVD1Q14C86 1478 aa17.24■□□□□ 0.35
DDX19A-201ENST00000302243 TARBP1Q13395 1621 aaKnown RBP17.23■□□□□ 0.35
DDX19A-201ENST00000302243 ABCA5Q8WWZ7 1642 aa17.23■□□□□ 0.35
DDX19A-201ENST00000302243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.22■□□□□ 0.35
DDX19A-201ENST00000302243 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.352e-6■■■■□ 25.6
DDX19A-201ENST00000302243 KANK4Q5T7N3 995 aaPredicted RBP17.2■□□□□ 0.34
DDX19A-201ENST00000302243 ERCC6Q03468 1493 aa17.19■□□□□ 0.34
DDX19A-201ENST00000302243 CUL7Q14999 1698 aa17.19■□□□□ 0.34
DDX19A-201ENST00000302243 ZNF608Q9ULD9 1512 aaPredicted RBP17.15■□□□□ 0.34
DDX19A-201ENST00000302243 HNRNPUL2Q1KMD3 747 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms