RNA–Protein interactions for RNA: ENST00000298999.7

R3HCC1L-201, Transcript of R3H domain and coiled-coil containing 1 like, humanhuman

APPRIS P1 TSL 5 BASIC

Gene R3HCC1L, Length 3,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1L-201ENST00000298999 NISCHQ9Y2I1 1504 aa11.43□□□□□ -0.58
R3HCC1L-201ENST00000298999 CCDC180Q9P1Z9 1646 aa10.7□□□□□ -0.7
R3HCC1L-201ENST00000298999 AEBP2Q6ZN18 517 aaPredicted RBP10.51□□□□□ -0.73
R3HCC1L-201ENST00000298999 CHIC1Q5VXU3 224 aa10.47□□□□□ -0.73
R3HCC1L-201ENST00000298999 MYO15BQ96JP2 1530 aa10.04□□□□□ -0.8
R3HCC1L-201ENST00000298999 DCAF1Q9Y4B6 1507 aa9.98□□□□□ -0.81
R3HCC1L-201ENST00000298999 UNC13AQ9UPW8 1703 aa9.81□□□□□ -0.84
R3HCC1L-201ENST00000298999 ZCCHC6Q5VYS8 1495 aaKnown RBP9.73□□□□□ -0.85
R3HCC1L-201ENST00000298999 NACADO15069 1562 aa9.62□□□□□ -0.87
R3HCC1L-201ENST00000298999 SHROOM4Q9ULL8 1493 aa9.6□□□□□ -0.87
R3HCC1L-201ENST00000298999 ABCC9O60706 1549 aa9.59□□□□□ -0.87
R3HCC1L-201ENST00000298999 BICRAQ9NZM4 1560 aa9.46□□□□□ -0.9
R3HCC1L-201ENST00000298999 RB1CC1Q8TDY2 1594 aa9.44□□□□□ -0.9
R3HCC1L-201ENST00000298999 DCAF8L2P0C7V8 631 aa9.39□□□□□ -0.91
R3HCC1L-201ENST00000298999 DNAJC5BQ9UF47 199 aa9.32□□□□□ -0.92
R3HCC1L-201ENST00000298999 PEG3Q9GZU2 1588 aa9.28□□□□□ -0.92
R3HCC1L-201ENST00000298999 PHF23Q9BUL5 403 aaPredicted RBP9.22□□□□□ -0.93
R3HCC1L-201ENST00000298999 PRDM2Q13029 1718 aa9.13□□□□□ -0.95
R3HCC1L-201ENST00000298999 SMARCA2P51531 1590 aa9.02□□□□□ -0.97
R3HCC1L-201ENST00000298999 EIF4G1Q04637 1599 aaKnown RBP8.99□□□□□ -0.97
R3HCC1L-201ENST00000298999 PABPN1Q86U42 306 aaKnown RBP eCLIP8.98□□□□□ -0.97
R3HCC1L-201ENST00000298999 SMARCA4P51532 1647 aa8.97□□□□□ -0.97
R3HCC1L-201ENST00000298999 HMGXB3Q12766 1538 aa8.96□□□□□ -0.97
R3HCC1L-201ENST00000298999 SENP3Q9H4L4 574 aaPredicted RBP8.95□□□□□ -0.98
R3HCC1L-201ENST00000298999 SCRIBQ14160 1630 aa8.94□□□□□ -0.98
R3HCC1L-201ENST00000298999 BAZ1AQ9NRL2 1556 aaPredicted RBP8.89□□□□□ -0.99
R3HCC1L-201ENST00000298999 CC2D2AQ9P2K1 1620 aa8.78□□□□□ -1
R3HCC1L-201ENST00000298999 NCAPD3P42695 1498 aa8.73□□□□□ -1.01
R3HCC1L-201ENST00000298999 TOP2AP11388 1531 aaKnown RBP8.73□□□□□ -1.01
R3HCC1L-201ENST00000298999 WDR97A6NE52 1622 aa8.71□□□□□ -1.01
R3HCC1L-201ENST00000298999 PLPPR3Q6T4P5 718 aa8.71□□□□□ -1.02
R3HCC1L-201ENST00000298999 DNAJC5Q9H3Z4 198 aa8.71□□□□□ -1.02
R3HCC1L-201ENST00000298999 MROH2BQ7Z745 1585 aa8.67□□□□□ -1.02
R3HCC1L-201ENST00000298999 WIZO95785 1651 aa8.67□□□□□ -1.02
R3HCC1L-201ENST00000298999 THOC2Q8NI27 1593 aaKnown RBP8.64□□□□□ -1.03
R3HCC1L-201ENST00000298999 SUPT5HO00267 1087 aaKnown RBP8.62□□□□□ -1.03
R3HCC1L-201ENST00000298999 ATAD2BQ9ULI0 1458 aa8.62□□□□□ -1.03
R3HCC1L-201ENST00000298999 CECR2Q9BXF3 1484 aa8.6□□□□□ -1.03
R3HCC1L-201ENST00000298999 LAMC3Q9Y6N6 1575 aa8.59□□□□□ -1.03
R3HCC1L-201ENST00000298999 BIVM-ERCC5R4GMW8 1640 aa8.59□□□□□ -1.03
R3HCC1L-201ENST00000298999 KIF21AQ7Z4S6 1674 aa8.54□□□□□ -1.04
R3HCC1L-201ENST00000298999 RSF1Q96T23 1441 aaPredicted RBP8.53□□□□□ -1.04
R3HCC1L-201ENST00000298999 WDR62O43379 1518 aa8.48□□□□□ -1.05
R3HCC1L-201ENST00000298999 CFTRP13569 1480 aa8.43□□□□□ -1.06
R3HCC1L-201ENST00000298999 TARBP1Q13395 1621 aaKnown RBP8.42□□□□□ -1.06
R3HCC1L-201ENST00000298999 TRIM41Q8WV44 630 aa8.41□□□□□ -1.06
R3HCC1L-201ENST00000298999 ABCA5Q8WWZ7 1642 aa8.37□□□□□ -1.07
R3HCC1L-201ENST00000298999 TOP2BQ02880 1626 aa8.35□□□□□ -1.07
R3HCC1L-201ENST00000298999 BAZ1BQ9UIG0 1483 aaKnown RBP8.34□□□□□ -1.07
R3HCC1L-201ENST00000298999 PBRM1Q86U86 1689 aa8.32□□□□□ -1.08
R3HCC1L-201ENST00000298999 DNMBPQ6XZF7 1577 aa8.32□□□□□ -1.08
R3HCC1L-201ENST00000298999 CCDC88BA6NC98 1476 aa8.31□□□□□ -1.08
R3HCC1L-201ENST00000298999 ADRA2BP18089 450 aa8.29□□□□□ -1.08
R3HCC1L-201ENST00000298999 ERCC6Q03468 1493 aa8.29□□□□□ -1.08
R3HCC1L-201ENST00000298999 FOXD1Q16676 465 aa8.27□□□□□ -1.09
R3HCC1L-201ENST00000298999 CUX2O14529 1486 aa8.26□□□□□ -1.09
R3HCC1L-201ENST00000298999 SHROOM2Q13796 1616 aa8.25□□□□□ -1.09
R3HCC1L-201ENST00000298999 SYNJ1O43426 1573 aa8.21□□□□□ -1.09
R3HCC1L-201ENST00000298999 CUX1P39880 1505 aa8.2□□□□□ -1.1
R3HCC1L-201ENST00000298999 URB2Q14146 1524 aaKnown RBP8.2□□□□□ -1.1
R3HCC1L-201ENST00000298999 ABCC8Q09428 1581 aa8.18□□□□□ -1.1
R3HCC1L-201ENST00000298999 PPP6R1Q9UPN7 881 aa8.17□□□□□ -1.1
R3HCC1L-201ENST00000298999 CUL7Q14999 1698 aa8.16□□□□□ -1.1
R3HCC1L-201ENST00000298999 MRC2Q9UBG0 1479 aa8.15□□□□□ -1.1
R3HCC1L-201ENST00000298999 EIF4G3O43432 1585 aaKnown RBP8.14□□□□□ -1.11
R3HCC1L-201ENST00000298999 CADPSQ9ULU8 1353 aa8.13□□□□□ -1.11
R3HCC1L-201ENST00000298999 CTTNBP2Q8WZ74 1663 aa8.13□□□□□ -1.11
R3HCC1L-201ENST00000298999 NESP48681 1621 aa8.13□□□□□ -1.11
R3HCC1L-201ENST00000298999 CLASP1Q7Z460 1538 aa8.13□□□□□ -1.11
R3HCC1L-201ENST00000298999 ABCA10Q8WWZ4 1543 aa8.12□□□□□ -1.11
R3HCC1L-201ENST00000298999 ADAMTS12P58397 1594 aa8.12□□□□□ -1.11
R3HCC1L-201ENST00000298999 EHMT2Q96KQ7 1210 aa8.12□□□□□ -1.11
R3HCC1L-201ENST00000298999 TOPBP1Q92547 1522 aa8.12□□□□□ -1.11
R3HCC1L-201ENST00000298999 ERICH3Q5RHP9 1530 aa8.11□□□□□ -1.11
R3HCC1L-201ENST00000298999 CHD1O14646 1710 aa8.09□□□□□ -1.11
R3HCC1L-201ENST00000298999 KIF21BO75037 1637 aa8.08□□□□□ -1.12
R3HCC1L-201ENST00000298999 FANCD2Q9BXW9 1451 aa8.07□□□□□ -1.12
R3HCC1L-201ENST00000298999 RUSC2Q8N2Y8 1516 aa8.05□□□□□ -1.12
R3HCC1L-201ENST00000298999 FAM9AQ8IZU1 332 aaPredicted RBP8.05□□□□□ -1.12
R3HCC1L-201ENST00000298999 CEP164Q9UPV0 1460 aa8.04□□□□□ -1.12
R3HCC1L-201ENST00000298999 PIAS4Q8N2W9 510 aaPredicted RBP8.04□□□□□ -1.12
R3HCC1L-201ENST00000298999 SAMD9Q5K651 1589 aa8.03□□□□□ -1.12
R3HCC1L-201ENST00000298999 POLA1P09884 1462 aaPredicted RBP8.01□□□□□ -1.13
R3HCC1L-201ENST00000298999 IFT140Q96RY7 1462 aa8.01□□□□□ -1.13
R3HCC1L-201ENST00000298999 LRRIQ1Q96JM4 1722 aa8.01□□□□□ -1.13
R3HCC1L-201ENST00000298999 PDS5BQ9NTI5 1447 aa7.99□□□□□ -1.13
R3HCC1L-201ENST00000298999 TRHP20396 242 aaPredicted RBP7.96□□□□□ -1.13
R3HCC1L-201ENST00000298999 OSCARQ8IYS5 282 aa7.94□□□□□ -1.14
R3HCC1L-201ENST00000298999 CEP170Q5SW79 1584 aa7.94□□□□□ -1.14
R3HCC1L-201ENST00000298999 MAGI1Q96QZ7 1491 aaPredicted RBP7.93□□□□□ -1.14
R3HCC1L-201ENST00000298999 FGD5Q6ZNL6 1462 aa7.93□□□□□ -1.14
R3HCC1L-201ENST00000298999 NUP160Q12769 1436 aa7.9□□□□□ -1.14
R3HCC1L-201ENST00000298999 CYB5RLQ6IPT4 315 aa7.9□□□□□ -1.14
R3HCC1L-201ENST00000298999 ADCY10Q96PN6 1610 aa7.9□□□□□ -1.15
R3HCC1L-201ENST00000298999 PRXQ9BXM0 1461 aa7.89□□□□□ -1.15
R3HCC1L-201ENST00000298999 RANGAP1P46060 587 aaPredicted RBP7.89□□□□□ -1.15
R3HCC1L-201ENST00000298999 KCNA4P22459 653 aa7.88□□□□□ -1.15
R3HCC1L-201ENST00000298999 UGGT2Q9NYU1 1516 aa7.88□□□□□ -1.15
R3HCC1L-201ENST00000298999 CFAP43Q8NDM7 1665 aa7.86□□□□□ -1.15
R3HCC1L-201ENST00000298999 PPRC1Q5VV67 1664 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms