RNA–Protein interactions for RNA: ENST00000296530.12

FAM198B-201, Transcript of family with sequence similarity 198 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM198B, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM198B-201ENST00000296530 DCAF8L2P0C7V8 631 aa25.86■■□□□ 1.73
FAM198B-201ENST00000296530 NISCHQ9Y2I1 1504 aa24.65■■□□□ 1.54
FAM198B-201ENST00000296530 SUPT5HO00267 1087 aaKnown RBP23.71■■□□□ 1.39
FAM198B-201ENST00000296530 SHROOM4Q9ULL8 1493 aa23.51■■□□□ 1.35
FAM198B-201ENST00000296530 EHMT2Q96KQ7 1210 aa22.88■■□□□ 1.25
FAM198B-201ENST00000296530 FAM9AQ8IZU1 332 aaPredicted RBP22.86■■□□□ 1.25
FAM198B-201ENST00000296530 APLP2Q06481 763 aa22.6■■□□□ 1.21
FAM198B-201ENST00000296530 RANGAP1P46060 587 aaPredicted RBP22.2■■□□□ 1.14
FAM198B-201ENST00000296530 ATP1B4Q9UN42 357 aaPredicted RBP22.13■■□□□ 1.13
FAM198B-201ENST00000296530 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
FAM198B-201ENST00000296530 ABCC9O60706 1549 aa21.99■■□□□ 1.11
FAM198B-201ENST00000296530 TTBK1Q5TCY1 1321 aaPredicted RBP21.96■■□□□ 1.11
FAM198B-201ENST00000296530 UBTFP17480 764 aaKnown RBP21.89■■□□□ 1.09
FAM198B-201ENST00000296530 PABPN1Q86U42 306 aaKnown RBP eCLIP21.8■■□□□ 1.08
FAM198B-201ENST00000296530 MYT1LQ9UL68 1186 aa21.62■■□□□ 1.05
FAM198B-201ENST00000296530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.61■■□□□ 1.05
FAM198B-201ENST00000296530 HNRNPUL2Q1KMD3 747 aaKnown RBP21.61■■□□□ 1.05
FAM198B-201ENST00000296530 PCGF6Q9BYE7 350 aa21.37■■□□□ 1.01
FAM198B-201ENST00000296530 FBLN2P98095 1184 aa21.18■□□□□ 0.98
FAM198B-201ENST00000296530 CCER1Q8TC90 406 aaPredicted RBP21.13■□□□□ 0.97
FAM198B-201ENST00000296530 PELP1Q8IZL8 1130 aaKnown RBP21.09■□□□□ 0.97
FAM198B-201ENST00000296530 CHIC1Q5VXU3 224 aa21.05■□□□□ 0.96
FAM198B-201ENST00000296530 ITGAEP38570 1179 aa21.04■□□□□ 0.96
FAM198B-201ENST00000296530 PPARGC1BQ86YN6 1023 aaKnown RBP21.01■□□□□ 0.95
FAM198B-201ENST00000296530 ZEB1P37275 1124 aaPredicted RBP20.8■□□□□ 0.92
FAM198B-201ENST00000296530 POLR3GLQ9BT43 218 aa20.72■□□□□ 0.91
FAM198B-201ENST00000296530 SCRIBQ14160 1630 aa20.68■□□□□ 0.9
FAM198B-201ENST00000296530 LOC105371045A0A1W2PR82 267 aa20.65■□□□□ 0.9
FAM198B-201ENST00000296530 SLC4A1APQ9BWU0 796 aaKnown RBP20.61■□□□□ 0.89
FAM198B-201ENST00000296530 FAM50AQ14320 339 aaKnown RBP20.6■□□□□ 0.89
FAM198B-201ENST00000296530 NPM1P06748 294 aaKnown RBP eCLIP20.58■□□□□ 0.89
FAM198B-201ENST00000296530 ARID3CA6NKF2 412 aa20.51■□□□□ 0.87
FAM198B-201ENST00000296530 TRIM52Q96A61 297 aa20.51■□□□□ 0.87
FAM198B-201ENST00000296530 P3H3Q8IVL6 736 aa20.46■□□□□ 0.87
FAM198B-201ENST00000296530 TRIM26Q12899 539 aaPredicted RBP20.46■□□□□ 0.87
FAM198B-201ENST00000296530 ESF1Q9H501 851 aaKnown RBP20.46■□□□□ 0.87
FAM198B-201ENST00000296530 CENPBP07199 599 aaPredicted RBP20.43■□□□□ 0.86
FAM198B-201ENST00000296530 BCANQ96GW7 911 aa20.41■□□□□ 0.86
FAM198B-201ENST00000296530 CNGB1Q14028 1251 aaPredicted RBP20.4■□□□□ 0.86
FAM198B-201ENST00000296530 CDK11AQ9UQ88 783 aaPredicted RBP20.4■□□□□ 0.86
FAM198B-201ENST00000296530 RB1CC1Q8TDY2 1594 aa20.38■□□□□ 0.85
FAM198B-201ENST00000296530 NEFLP07196 543 aa20.34■□□□□ 0.85
FAM198B-201ENST00000296530 ZNF777Q9ULD5 760 aaPredicted RBP20.32■□□□□ 0.84
FAM198B-201ENST00000296530 CCDC180Q9P1Z9 1646 aa20.3■□□□□ 0.84
FAM198B-201ENST00000296530 CSRNP3Q8WYN3 585 aa20.29■□□□□ 0.84
FAM198B-201ENST00000296530 CHMP7Q8WUX9 453 aaPredicted RBP20.29■□□□□ 0.84
FAM198B-201ENST00000296530 PLPPR3Q6T4P5 718 aa20.27■□□□□ 0.83
FAM198B-201ENST00000296530 ZCCHC6Q5VYS8 1495 aaKnown RBP20.25■□□□□ 0.83
FAM198B-201ENST00000296530 YTHDC1Q96MU7 727 aaKnown RBP20.2■□□□□ 0.82
FAM198B-201ENST00000296530 ZNF326Q5BKZ1 582 aaKnown RBP20.2■□□□□ 0.82
FAM198B-201ENST00000296530 STAG3Q9UJ98 1225 aa20.14■□□□□ 0.81
FAM198B-201ENST00000296530 NEUROD1Q13562 356 aa20.11■□□□□ 0.81
FAM198B-201ENST00000296530 ERICH6Q7L0X2 663 aa20.11■□□□□ 0.81
FAM198B-201ENST00000296530 NACADO15069 1562 aa20.06■□□□□ 0.8
FAM198B-201ENST00000296530 ERCC6Q03468 1493 aa20.05■□□□□ 0.8
FAM198B-201ENST00000296530 CHGAP10645 457 aaKnown RBP20.02■□□□□ 0.8
FAM198B-201ENST00000296530 SLC24A1O60721 1099 aa19.91■□□□□ 0.78
FAM198B-201ENST00000296530 BAZ1BQ9UIG0 1483 aaKnown RBP19.89■□□□□ 0.78
FAM198B-201ENST00000296530 KCNH8Q96L42 1107 aa19.88■□□□□ 0.77
FAM198B-201ENST00000296530 TSPY4P0CV99 314 aa19.86■□□□□ 0.77
FAM198B-201ENST00000296530 TSPY10P0CW01 314 aa19.86■□□□□ 0.77
FAM198B-201ENST00000296530 NEFMP07197 916 aa19.84■□□□□ 0.77
FAM198B-201ENST00000296530 TRHP20396 242 aaPredicted RBP19.83■□□□□ 0.76
FAM198B-201ENST00000296530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.82■□□□□ 0.767e-11■■□□□ 13.6
FAM198B-201ENST00000296530 HRCP23327 699 aa19.78■□□□□ 0.76
FAM198B-201ENST00000296530 ARID4BQ4LE39 1312 aaPredicted RBP19.78■□□□□ 0.76
FAM198B-201ENST00000296530 PLEKHD1A6NEE1 506 aa19.77■□□□□ 0.75
FAM198B-201ENST00000296530 DAXXQ9UER7 740 aaPredicted RBP19.73■□□□□ 0.75
FAM198B-201ENST00000296530 MTUS2Q5JR59 1369 aa19.71■□□□□ 0.75
FAM198B-201ENST00000296530 CHIC2Q9UKJ5 165 aa19.71■□□□□ 0.75
FAM198B-201ENST00000296530 CLSPNQ9HAW4 1339 aa19.65■□□□□ 0.74
FAM198B-201ENST00000296530 PPP1R15AO75807 674 aaPredicted RBP19.61■□□□□ 0.73
FAM198B-201ENST00000296530 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
FAM198B-201ENST00000296530 ZBTB47Q9UFB7 747 aaPredicted RBP19.61■□□□□ 0.73
FAM198B-201ENST00000296530 RSF1Q96T23 1441 aaPredicted RBP19.6■□□□□ 0.73
FAM198B-201ENST00000296530 C14orf37Q86TY3 774 aa19.59■□□□□ 0.73
FAM198B-201ENST00000296530 ANP32CO43423 234 aa19.57■□□□□ 0.72
FAM198B-201ENST00000296530 WRNQ14191 1432 aaPredicted RBP eCLIP19.55■□□□□ 0.72
FAM198B-201ENST00000296530 MYT1Q01538 1121 aa19.54■□□□□ 0.72
FAM198B-201ENST00000296530 KIF27Q86VH2 1401 aa19.53■□□□□ 0.72
FAM198B-201ENST00000296530 BAZ1AQ9NRL2 1556 aaPredicted RBP19.51■□□□□ 0.71
FAM198B-201ENST00000296530 PDS5BQ9NTI5 1447 aa19.49■□□□□ 0.71
FAM198B-201ENST00000296530 TONSLQ96HA7 1378 aa19.48■□□□□ 0.71
FAM198B-201ENST00000296530 DIEXFQ68CQ4 756 aaKnown RBP19.46■□□□□ 0.71
FAM198B-201ENST00000296530 SENP3Q9H4L4 574 aaPredicted RBP19.46■□□□□ 0.71
FAM198B-201ENST00000296530 CFDP1Q9UEE9 299 aaPredicted RBP19.46■□□□□ 0.71
FAM198B-201ENST00000296530 CANXP27824 592 aaKnown RBP19.46■□□□□ 0.71
FAM198B-201ENST00000296530 A0A0G2JS52 829 aa19.44■□□□□ 0.7
FAM198B-201ENST00000296530 CLIP1P30622 1438 aa19.43■□□□□ 0.7
FAM198B-201ENST00000296530 KDM2AQ9Y2K7 1162 aa19.42■□□□□ 0.7
FAM198B-201ENST00000296530 BCL11AQ9H165 835 aa19.42■□□□□ 0.7
FAM198B-201ENST00000296530 CECR2Q9BXF3 1484 aa19.42■□□□□ 0.7
FAM198B-201ENST00000296530 PLEKHG5O94827 1062 aa19.41■□□□□ 0.7
FAM198B-201ENST00000296530 HAP1P54257 671 aaPredicted RBP19.39■□□□□ 0.7
FAM198B-201ENST00000296530 EEA1Q15075 1411 aa19.38■□□□□ 0.69
FAM198B-201ENST00000296530 RRP7BPQ9NSQ0 103 aa19.37■□□□□ 0.69
FAM198B-201ENST00000296530 DCAF1Q9Y4B6 1507 aa19.36■□□□□ 0.69
FAM198B-201ENST00000296530 ZBTB7CA1YPR0 619 aa19.33■□□□□ 0.68
FAM198B-201ENST00000296530 MLECQ14165 292 aa19.33■□□□□ 0.68
FAM198B-201ENST00000296530 NPM2Q86SE8 214 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms