RNA–Protein interactions for RNA: ENST00000296452.4

BSN-201, Transcript of bassoon presynaptic cytomatrix protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BSN, Length 15,955 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BSN-201ENST00000296452 DCAF8L2P0C7V8 631 aa16.38■□□□□ 0.21
BSN-201ENST00000296452 PELP1Q8IZL8 1130 aaKnown RBP15.89■□□□□ 0.13
BSN-201ENST00000296452 SUPT5HO00267 1087 aaKnown RBP15.42■□□□□ 0.06
BSN-201ENST00000296452 FAM9AQ8IZU1 332 aaPredicted RBP15.41■□□□□ 0.06
BSN-201ENST00000296452 APLP2Q06481 763 aa15.34■□□□□ 0.05
BSN-201ENST00000296452 CCER1Q8TC90 406 aaPredicted RBP15.16■□□□□ 0.02
BSN-201ENST00000296452 ERICH6Q7L0X2 663 aa14.99□□□□□ -0.01
BSN-201ENST00000296452 CENPBP07199 599 aaPredicted RBP14.91□□□□□ -0.02
BSN-201ENST00000296452 ZEB1P37275 1124 aaPredicted RBP14.9□□□□□ -0.02
BSN-201ENST00000296452 EHMT2Q96KQ7 1210 aa14.88□□□□□ -0.03
BSN-201ENST00000296452 MYT1Q01538 1121 aa14.87□□□□□ -0.03
BSN-201ENST00000296452 SHROOM4Q9ULL8 1493 aa14.82□□□□□ -0.04
BSN-201ENST00000296452 NISCHQ9Y2I1 1504 aa14.74□□□□□ -0.05
BSN-201ENST00000296452 NEFLP07196 543 aa14.68□□□□□ -0.06
BSN-201ENST00000296452 PCGF6Q9BYE7 350 aa14.66□□□□□ -0.06
BSN-201ENST00000296452 YTHDC1Q96MU7 727 aaKnown RBP14.53□□□□□ -0.08
BSN-201ENST00000296452 ATP1B4Q9UN42 357 aaPredicted RBP14.52□□□□□ -0.08
BSN-201ENST00000296452 DAXXQ9UER7 740 aaPredicted RBP14.48□□□□□ -0.09
BSN-201ENST00000296452 TRIM41Q8WV44 630 aa14.46□□□□□ -0.09
BSN-201ENST00000296452 TTBK1Q5TCY1 1321 aaPredicted RBP14.43□□□□□ -0.1
BSN-201ENST00000296452 UBTFP17480 764 aaKnown RBP14.43□□□□□ -0.1
BSN-201ENST00000296452 RANGAP1P46060 587 aaPredicted RBP14.36□□□□□ -0.11
BSN-201ENST00000296452 TRIM26Q12899 539 aaPredicted RBP14.1□□□□□ -0.15
BSN-201ENST00000296452 MYT1LQ9UL68 1186 aa14.1□□□□□ -0.15
BSN-201ENST00000296452 ZNF316A6NFI3 1004 aaPredicted RBP14.02□□□□□ -0.16
BSN-201ENST00000296452 RTL5Q5HYW3 569 aaPredicted RBP14□□□□□ -0.17
BSN-201ENST00000296452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14□□□□□ -0.17
BSN-201ENST00000296452 HNRNPUL2Q1KMD3 747 aaKnown RBP14□□□□□ -0.17
BSN-201ENST00000296452 POLR3GLQ9BT43 218 aa13.97□□□□□ -0.17
BSN-201ENST00000296452 CLSPNQ9HAW4 1339 aa13.93□□□□□ -0.18
BSN-201ENST00000296452 HRCP23327 699 aa13.89□□□□□ -0.19
BSN-201ENST00000296452 SLC4A1APQ9BWU0 796 aaKnown RBP13.88□□□□□ -0.19
BSN-201ENST00000296452 ITGAEP38570 1179 aa13.85□□□□□ -0.19
BSN-201ENST00000296452 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.19
BSN-201ENST00000296452 PPARGC1BQ86YN6 1023 aaKnown RBP13.79□□□□□ -0.2
BSN-201ENST00000296452 CHIC1Q5VXU3 224 aa13.67□□□□□ -0.22
BSN-201ENST00000296452 DIEXFQ68CQ4 756 aaKnown RBP13.66□□□□□ -0.22
BSN-201ENST00000296452 NEFMP07197 916 aa13.66□□□□□ -0.22
BSN-201ENST00000296452 CDK11AQ9UQ88 783 aaPredicted RBP13.66□□□□□ -0.22
BSN-201ENST00000296452 CNGB1Q14028 1251 aaPredicted RBP13.64□□□□□ -0.23
BSN-201ENST00000296452 ANP32CO43423 234 aa13.64□□□□□ -0.23
BSN-201ENST00000296452 TRIM52Q96A61 297 aa13.6□□□□□ -0.23
BSN-201ENST00000296452 FAM50AQ14320 339 aaKnown RBP13.57□□□□□ -0.24
BSN-201ENST00000296452 ANP32BQ92688 251 aaKnown RBP13.55□□□□□ -0.24
BSN-201ENST00000296452 LOC105371045A0A1W2PR82 267 aa13.53□□□□□ -0.24
BSN-201ENST00000296452 CANXP27824 592 aaKnown RBP13.49□□□□□ -0.25
BSN-201ENST00000296452 NEUROD1Q13562 356 aa13.47□□□□□ -0.25
BSN-201ENST00000296452 ANP32AP39687 249 aaKnown RBP13.45□□□□□ -0.26
BSN-201ENST00000296452 SLC24A1O60721 1099 aa13.43□□□□□ -0.26
BSN-201ENST00000296452 BCANQ96GW7 911 aa13.39□□□□□ -0.27
BSN-201ENST00000296452 HSP90AA1P07900 732 aaKnown RBP13.36□□□□□ -0.27
BSN-201ENST00000296452 UPF2Q9HAU5 1272 aaKnown RBP13.36□□□□□ -0.27
BSN-201ENST00000296452 ZNF326Q5BKZ1 582 aaKnown RBP13.32□□□□□ -0.28
BSN-201ENST00000296452 GLIPR1L2Q4G1C9 344 aa13.29□□□□□ -0.28
BSN-201ENST00000296452 GTF3C3Q9Y5Q9 886 aa13.29□□□□□ -0.28
BSN-201ENST00000296452 ESF1Q9H501 851 aaKnown RBP13.27□□□□□ -0.28
BSN-201ENST00000296452 BCL11AQ9H165 835 aa13.22□□□□□ -0.29
BSN-201ENST00000296452 FBLN2P98095 1184 aa13.21□□□□□ -0.29
BSN-201ENST00000296452 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.2□□□□□ -0.3
BSN-201ENST00000296452 CDK11BP21127 795 aaKnown RBP13.18□□□□□ -0.3
BSN-201ENST00000296452 STAG3Q9UJ98 1225 aa13.18□□□□□ -0.3
BSN-201ENST00000296452 ANP32EQ9BTT0 268 aa13.16□□□□□ -0.3
BSN-201ENST00000296452 EIF5BO60841 1220 aaKnown RBP13.13□□□□□ -0.31
BSN-201ENST00000296452 NPM2Q86SE8 214 aaKnown RBP13.1□□□□□ -0.31
BSN-201ENST00000296452 ACIN1Q9UKV3 1341 aaKnown RBP13.09□□□□□ -0.31
BSN-201ENST00000296452 MYH16Q9H6N6 1097 aa13.07□□□□□ -0.32
BSN-201ENST00000296452 TMC1Q8TDI8 760 aa13.06□□□□□ -0.32
BSN-201ENST00000296452 CSRNP3Q8WYN3 585 aa13.05□□□□□ -0.32
BSN-201ENST00000296452 ZNF777Q9ULD5 760 aaPredicted RBP13.05□□□□□ -0.32
BSN-201ENST00000296452 NPM1P06748 294 aaKnown RBP eCLIP13.05□□□□□ -0.32
BSN-201ENST00000296452 PABPN1Q86U42 306 aaKnown RBP eCLIP13.05□□□□□ -0.32
BSN-201ENST00000296452 CCDC136Q96JN2 1154 aa13.03□□□□□ -0.32
BSN-201ENST00000296452 TONSLQ96HA7 1378 aa13.02□□□□□ -0.33
BSN-201ENST00000296452 WDR43Q15061 677 aaKnown RBP eCLIP13.01□□□□□ -0.33
BSN-201ENST00000296452 CHGAP10645 457 aaKnown RBP13.01□□□□□ -0.33
BSN-201ENST00000296452 BECN1Q14457 450 aa13.01□□□□□ -0.33
BSN-201ENST00000296452 NCLP19338 710 aaKnown RBP13.01□□□□□ -0.33
BSN-201ENST00000296452 GOLGA6L22H0YM25 854 aa12.99□□□□□ -0.33
BSN-201ENST00000296452 TNNT2P45379 298 aaPredicted RBP12.98□□□□□ -0.33
BSN-201ENST00000296452 HNRNPUQ00839 825 aaKnown RBP eCLIP12.98□□□□□ -0.33
BSN-201ENST00000296452 FKBP8Q14318 412 aa12.98□□□□□ -0.33
BSN-201ENST00000296452 DDRGK1Q96HY6 314 aa12.98□□□□□ -0.33
BSN-201ENST00000296452 P3H3Q8IVL6 736 aa12.96□□□□□ -0.34
BSN-201ENST00000296452 TSPY4P0CV99 314 aa12.94□□□□□ -0.34
BSN-201ENST00000296452 TSPY10P0CW01 314 aa12.94□□□□□ -0.34
BSN-201ENST00000296452 TRIM44Q96DX7 344 aaPredicted RBP12.92□□□□□ -0.34
BSN-201ENST00000296452 FAM9BQ8IZU0 186 aa12.92□□□□□ -0.34
BSN-201ENST00000296452 CASC1Q6TDU7 716 aa12.9□□□□□ -0.34
BSN-201ENST00000296452 ZRSR1Q15695 479 aaKnown RBP12.89□□□□□ -0.35
BSN-201ENST00000296452 DDX10Q13206 875 aaKnown RBP12.88□□□□□ -0.35
BSN-201ENST00000296452 CDCA8Q53HL2 280 aa12.88□□□□□ -0.35
BSN-201ENST00000296452 ARID3CA6NKF2 412 aa12.87□□□□□ -0.35
BSN-201ENST00000296452 CHMP4BQ9H444 224 aaKnown RBP12.85□□□□□ -0.35
BSN-201ENST00000296452 MRS2Q9HD23 443 aa12.85□□□□□ -0.35
BSN-201ENST00000296452 NBR1Q14596 966 aa12.83□□□□□ -0.36
BSN-201ENST00000296452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.82□□□□□ -0.36
BSN-201ENST00000296452 SALL2Q9Y467 1007 aaPredicted RBP12.82□□□□□ -0.36
BSN-201ENST00000296452 NRDCO43847 1150 aa12.79□□□□□ -0.36
BSN-201ENST00000296452 CFAP53Q96M91 514 aa12.79□□□□□ -0.36
BSN-201ENST00000296452 EIF4G2P78344 907 aaKnown RBP eCLIP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms