RNA–Protein interactions for RNA: ENST00000296266.7

IFT122-201, Transcript of intraflagellar transport 122, humanhuman

TSL 1 (best) BASIC

Gene IFT122, Length 4,151 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT122-201ENST00000296266 NISCHQ9Y2I1 1504 aa19.23■□□□□ 0.67
IFT122-201ENST00000296266 DCAF8L2P0C7V8 631 aa16.9■□□□□ 0.3
IFT122-201ENST00000296266 SHROOM4Q9ULL8 1493 aa16.67■□□□□ 0.26
IFT122-201ENST00000296266 CCDC180Q9P1Z9 1646 aa16.33■□□□□ 0.2
IFT122-201ENST00000296266 SUPT5HO00267 1087 aaKnown RBP16.25■□□□□ 0.19
IFT122-201ENST00000296266 ZCCHC6Q5VYS8 1495 aaKnown RBP16.11■□□□□ 0.17
IFT122-201ENST00000296266 ABCC9O60706 1549 aa15.99■□□□□ 0.15
IFT122-201ENST00000296266 SCRIBQ14160 1630 aa15.59■□□□□ 0.09
IFT122-201ENST00000296266 DCAF1Q9Y4B6 1507 aa15.56■□□□□ 0.08
IFT122-201ENST00000296266 PABPN1Q86U42 306 aaKnown RBP eCLIP15.37■□□□□ 0.05
IFT122-201ENST00000296266 NACADO15069 1562 aa15.35■□□□□ 0.05
IFT122-201ENST00000296266 RB1CC1Q8TDY2 1594 aa15.28■□□□□ 0.04
IFT122-201ENST00000296266 CHIC1Q5VXU3 224 aa15.27■□□□□ 0.03
IFT122-201ENST00000296266 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
IFT122-201ENST00000296266 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
IFT122-201ENST00000296266 RSF1Q96T23 1441 aaPredicted RBP15.14■□□□□ 0.01
IFT122-201ENST00000296266 CECR2Q9BXF3 1484 aa15.13■□□□□ 0.01
IFT122-201ENST00000296266 FAM9AQ8IZU1 332 aaPredicted RBP15.12■□□□□ 0.01
IFT122-201ENST00000296266 TRIM41Q8WV44 630 aa15.07■□□□□ 0
IFT122-201ENST00000296266 MROH2BQ7Z745 1585 aa14.98□□□□□ -0.01
IFT122-201ENST00000296266 LOC105371045A0A1W2PR82 267 aa14.96□□□□□ -0.01
IFT122-201ENST00000296266 WIZO95785 1651 aa14.85□□□□□ -0.03
IFT122-201ENST00000296266 BAZ1AQ9NRL2 1556 aaPredicted RBP14.84□□□□□ -0.03
IFT122-201ENST00000296266 UNC13AQ9UPW8 1703 aa14.74□□□□□ -0.05
IFT122-201ENST00000296266 SMARCA4P51532 1647 aa14.69□□□□□ -0.06
IFT122-201ENST00000296266 BICRAQ9NZM4 1560 aa14.67□□□□□ -0.06
IFT122-201ENST00000296266 PCGF6Q9BYE7 350 aa14.66□□□□□ -0.06
IFT122-201ENST00000296266 CCDC88BA6NC98 1476 aa14.61□□□□□ -0.07
IFT122-201ENST00000296266 TOP2AP11388 1531 aaKnown RBP14.58□□□□□ -0.08
IFT122-201ENST00000296266 BAZ1BQ9UIG0 1483 aaKnown RBP14.58□□□□□ -0.08
IFT122-201ENST00000296266 RANGAP1P46060 587 aaPredicted RBP14.56□□□□□ -0.08
IFT122-201ENST00000296266 TTBK1Q5TCY1 1321 aaPredicted RBP14.56□□□□□ -0.08
IFT122-201ENST00000296266 PPARGC1BQ86YN6 1023 aaKnown RBP14.55□□□□□ -0.08
IFT122-201ENST00000296266 UBTFP17480 764 aaKnown RBP14.54□□□□□ -0.08
IFT122-201ENST00000296266 ATAD2BQ9ULI0 1458 aa14.51□□□□□ -0.09
IFT122-201ENST00000296266 ABCC8Q09428 1581 aa14.5□□□□□ -0.09
IFT122-201ENST00000296266 SMARCA2P51531 1590 aa14.46□□□□□ -0.09
IFT122-201ENST00000296266 EIF4G1Q04637 1599 aaKnown RBP14.37□□□□□ -0.11
IFT122-201ENST00000296266 WRNQ14191 1432 aaPredicted RBP eCLIP14.36□□□□□ -0.11
IFT122-201ENST00000296266 CSRNP3Q8WYN3 585 aa14.36□□□□□ -0.11
IFT122-201ENST00000296266 SOGA1O94964 1423 aa14.33□□□□□ -0.12
IFT122-201ENST00000296266 TRIM26Q12899 539 aaPredicted RBP14.3□□□□□ -0.12
IFT122-201ENST00000296266 PEG3Q9GZU2 1588 aa14.23□□□□□ -0.13
IFT122-201ENST00000296266 NCAPD3P42695 1498 aa14.23□□□□□ -0.13
IFT122-201ENST00000296266 RUSC2Q8N2Y8 1516 aa14.23□□□□□ -0.13
IFT122-201ENST00000296266 APLP2Q06481 763 aa14.22□□□□□ -0.13
IFT122-201ENST00000296266 CC2D2AQ9P2K1 1620 aa14.15□□□□□ -0.14
IFT122-201ENST00000296266 HRCP23327 699 aa14.14□□□□□ -0.15
IFT122-201ENST00000296266 HMGXB3Q12766 1538 aa14.12□□□□□ -0.15
IFT122-201ENST00000296266 SYNJ1O43426 1573 aa14.11□□□□□ -0.15
IFT122-201ENST00000296266 EEA1Q15075 1411 aa14.11□□□□□ -0.15
IFT122-201ENST00000296266 ATP1B4Q9UN42 357 aaPredicted RBP14.11□□□□□ -0.15
IFT122-201ENST00000296266 CEP162Q5TB80 1403 aa14.1□□□□□ -0.15
IFT122-201ENST00000296266 DNAJC5BQ9UF47 199 aa14.1□□□□□ -0.15
IFT122-201ENST00000296266 CADPSQ9ULU8 1353 aa14.09□□□□□ -0.15
IFT122-201ENST00000296266 GOLGA3Q08378 1498 aa14.07□□□□□ -0.16
IFT122-201ENST00000296266 TNIKQ9UKE5 1360 aa14.04□□□□□ -0.16
IFT122-201ENST00000296266 CFTRP13569 1480 aa14.02□□□□□ -0.17
IFT122-201ENST00000296266 CEP164Q9UPV0 1460 aa14.01□□□□□ -0.17
IFT122-201ENST00000296266 CCER1Q8TC90 406 aaPredicted RBP14□□□□□ -0.17
IFT122-201ENST00000296266 NESP48681 1621 aa14□□□□□ -0.17
IFT122-201ENST00000296266 KIF27Q86VH2 1401 aa14□□□□□ -0.17
IFT122-201ENST00000296266 P3H3Q8IVL6 736 aa13.99□□□□□ -0.17
IFT122-201ENST00000296266 CLIP1P30622 1438 aa13.99□□□□□ -0.17
IFT122-201ENST00000296266 CUX2O14529 1486 aa13.98□□□□□ -0.17
IFT122-201ENST00000296266 HNRNPUL2Q1KMD3 747 aaKnown RBP13.98□□□□□ -0.17
IFT122-201ENST00000296266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.97□□□□□ -0.17
IFT122-201ENST00000296266 RAPGEF2Q9Y4G8 1499 aa13.97□□□□□ -0.17
IFT122-201ENST00000296266 FANCD2Q9BXW9 1451 aa13.96□□□□□ -0.17
IFT122-201ENST00000296266 CUX1P39880 1505 aa13.95□□□□□ -0.18
IFT122-201ENST00000296266 TOP2BQ02880 1626 aa13.92□□□□□ -0.18
IFT122-201ENST00000296266 ITGAEP38570 1179 aa13.89□□□□□ -0.19
IFT122-201ENST00000296266 FGD5Q6ZNL6 1462 aa13.88□□□□□ -0.19
IFT122-201ENST00000296266 RAD54L2Q9Y4B4 1467 aa13.85□□□□□ -0.19
IFT122-201ENST00000296266 CARMIL1Q5VZK9 1371 aa13.84□□□□□ -0.19
IFT122-201ENST00000296266 TDRD9Q8NDG6 1382 aaKnown RBP13.84□□□□□ -0.19
IFT122-201ENST00000296266 PDS5BQ9NTI5 1447 aa13.84□□□□□ -0.19
IFT122-201ENST00000296266 ZEB1P37275 1124 aaPredicted RBP13.84□□□□□ -0.19
IFT122-201ENST00000296266 FBLN2P98095 1184 aa13.81□□□□□ -0.2
IFT122-201ENST00000296266 IGF1RP08069 1367 aa13.79□□□□□ -0.2
IFT122-201ENST00000296266 BIVM-ERCC5R4GMW8 1640 aa13.78□□□□□ -0.2
IFT122-201ENST00000296266 KIF21BO75037 1637 aa13.77□□□□□ -0.2
IFT122-201ENST00000296266 ARID3CA6NKF2 412 aa13.77□□□□□ -0.21
IFT122-201ENST00000296266 VPS8Q8N3P4 1428 aa13.76□□□□□ -0.21
IFT122-201ENST00000296266 ERCC6Q03468 1493 aa13.76□□□□□ -0.21
IFT122-201ENST00000296266 TOPBP1Q92547 1522 aa13.75□□□□□ -0.21
IFT122-201ENST00000296266 PRXQ9BXM0 1461 aa13.73□□□□□ -0.21
IFT122-201ENST00000296266 POLA1P09884 1462 aaPredicted RBP13.73□□□□□ -0.21
IFT122-201ENST00000296266 KANK4Q5T7N3 995 aaPredicted RBP13.7□□□□□ -0.22
IFT122-201ENST00000296266 FAM50AQ14320 339 aaKnown RBP13.7□□□□□ -0.22
IFT122-201ENST00000296266 DNMBPQ6XZF7 1577 aa13.68□□□□□ -0.22
IFT122-201ENST00000296266 LAMC3Q9Y6N6 1575 aa13.68□□□□□ -0.22
IFT122-201ENST00000296266 URB2Q14146 1524 aaKnown RBP13.67□□□□□ -0.22
IFT122-201ENST00000296266 ERICH3Q5RHP9 1530 aa13.65□□□□□ -0.22
IFT122-201ENST00000296266 ARAP1Q96P48 1450 aa13.62□□□□□ -0.23
IFT122-201ENST00000296266 AQRO60306 1485 aaKnown RBP eCLIP13.62□□□□□ -0.23
IFT122-201ENST00000296266 GAPVD1Q14C86 1478 aa13.62□□□□□ -0.23
IFT122-201ENST00000296266 PRDM2Q13029 1718 aa13.62□□□□□ -0.23
IFT122-201ENST00000296266 FHOD3Q2V2M9 1422 aa13.61□□□□□ -0.23
IFT122-201ENST00000296266 CHMP7Q8WUX9 453 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms