RNA–Protein interactions for RNA: ENST00000295704.6

RNF25-201, Transcript of ring finger protein 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF25, Length 1,914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25-201ENST00000295704 NISCHQ9Y2I1 1504 aa32.26■■■□□ 2.76
RNF25-201ENST00000295704 CCDC180Q9P1Z9 1646 aa27.51■■□□□ 1.99
RNF25-201ENST00000295704 ZCCHC6Q5VYS8 1495 aaKnown RBP27.3■■□□□ 1.96
RNF25-201ENST00000295704 SHROOM4Q9ULL8 1493 aa27.14■■□□□ 1.93
RNF25-201ENST00000295704 SUPT5HO00267 1087 aaKnown RBP26.73■■□□□ 1.87
RNF25-201ENST00000295704 DCAF1Q9Y4B6 1507 aa26.67■■□□□ 1.86
RNF25-201ENST00000295704 ABCC9O60706 1549 aa26.55■■□□□ 1.84
RNF25-201ENST00000295704 DCAF8L2P0C7V8 631 aa26.34■■□□□ 1.81
RNF25-201ENST00000295704 CHIC1Q5VXU3 224 aa26.22■■□□□ 1.79
RNF25-201ENST00000295704 MYO15BQ96JP2 1530 aa25.99■■□□□ 1.75
RNF25-201ENST00000295704 NACADO15069 1562 aa25.64■■□□□ 1.7
RNF25-201ENST00000295704 RB1CC1Q8TDY2 1594 aa25.57■■□□□ 1.68
RNF25-201ENST00000295704 HRCP23327 699 aa25.55■■□□□ 1.68
RNF25-201ENST00000295704 RSF1Q96T23 1441 aaPredicted RBP25.51■■□□□ 1.67
RNF25-201ENST00000295704 SCRIBQ14160 1630 aa25.49■■□□□ 1.67
RNF25-201ENST00000295704 PCGF6Q9BYE7 350 aa25.32■■□□□ 1.64
RNF25-201ENST00000295704 LOC105371045A0A1W2PR82 267 aa25.28■■□□□ 1.64
RNF25-201ENST00000295704 UNC13AQ9UPW8 1703 aa25.19■■□□□ 1.62
RNF25-201ENST00000295704 TRIM26Q12899 539 aaPredicted RBP25.05■■□□□ 1.6
RNF25-201ENST00000295704 TRIM41Q8WV44 630 aa25.05■■□□□ 1.6
RNF25-201ENST00000295704 CECR2Q9BXF3 1484 aa25.01■■□□□ 1.59
RNF25-201ENST00000295704 MROH2BQ7Z745 1585 aa24.98■■□□□ 1.59
RNF25-201ENST00000295704 PABPN1Q86U42 306 aaKnown RBP eCLIP24.97■■□□□ 1.59
RNF25-201ENST00000295704 BICRAQ9NZM4 1560 aa24.91■■□□□ 1.58
RNF25-201ENST00000295704 WIZO95785 1651 aa24.82■■□□□ 1.56
RNF25-201ENST00000295704 BAZ1AQ9NRL2 1556 aaPredicted RBP24.79■■□□□ 1.56
RNF25-201ENST00000295704 PPARGC1BQ86YN6 1023 aaKnown RBP24.72■■□□□ 1.55
RNF25-201ENST00000295704 ZEB1P37275 1124 aaPredicted RBP24.66■■□□□ 1.54
RNF25-201ENST00000295704 EIF4G1Q04637 1599 aaKnown RBP24.63■■□□□ 1.53
RNF25-201ENST00000295704 FAM9AQ8IZU1 332 aaPredicted RBP24.61■■□□□ 1.53
RNF25-201ENST00000295704 TOP2AP11388 1531 aaKnown RBP24.56■■□□□ 1.52
RNF25-201ENST00000295704 SMARCA4P51532 1647 aa24.52■■□□□ 1.52
RNF25-201ENST00000295704 CCDC88BA6NC98 1476 aa24.4■■□□□ 1.5
RNF25-201ENST00000295704 SMARCA2P51531 1590 aa24.38■■□□□ 1.49
RNF25-201ENST00000295704 EEA1Q15075 1411 aa24.21■■□□□ 1.47
RNF25-201ENST00000295704 ABCC8Q09428 1581 aa24.21■■□□□ 1.47
RNF25-201ENST00000295704 EHMT2Q96KQ7 1210 aa24.2■■□□□ 1.46
RNF25-201ENST00000295704 PEG3Q9GZU2 1588 aa24.2■■□□□ 1.46
RNF25-201ENST00000295704 WRNQ14191 1432 aaPredicted RBP eCLIP24.2■■□□□ 1.46
RNF25-201ENST00000295704 TNIKQ9UKE5 1360 aa24.11■■□□□ 1.45
RNF25-201ENST00000295704 SOGA1O94964 1423 aa24.04■■□□□ 1.44
RNF25-201ENST00000295704 CSRNP3Q8WYN3 585 aa24.04■■□□□ 1.44
RNF25-201ENST00000295704 CEP162Q5TB80 1403 aa24.02■■□□□ 1.44
RNF25-201ENST00000295704 CC2D2AQ9P2K1 1620 aa23.98■■□□□ 1.43
RNF25-201ENST00000295704 DNAJC5BQ9UF47 199 aa23.98■■□□□ 1.43
RNF25-201ENST00000295704 GOLGA3Q08378 1498 aa23.91■■□□□ 1.42
RNF25-201ENST00000295704 RUSC2Q8N2Y8 1516 aa23.89■■□□□ 1.41
RNF25-201ENST00000295704 ATAD2BQ9ULI0 1458 aa23.88■■□□□ 1.41
RNF25-201ENST00000295704 CCER1Q8TC90 406 aaPredicted RBP23.83■■□□□ 1.41
RNF25-201ENST00000295704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.8■■□□□ 1.4
RNF25-201ENST00000295704 UBTFP17480 764 aaKnown RBP23.8■■□□□ 1.4
RNF25-201ENST00000295704 KIF21BO75037 1637 aa23.8■■□□□ 1.4
RNF25-201ENST00000295704 CEP164Q9UPV0 1460 aa23.79■■□□□ 1.4
RNF25-201ENST00000295704 BAZ1BQ9UIG0 1483 aaKnown RBP23.78■■□□□ 1.4
RNF25-201ENST00000295704 SYNJ1O43426 1573 aa23.77■■□□□ 1.4
RNF25-201ENST00000295704 NCAPD3P42695 1498 aa23.68■■□□□ 1.38
RNF25-201ENST00000295704 HMGXB3Q12766 1538 aa23.59■■□□□ 1.37
RNF25-201ENST00000295704 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
RNF25-201ENST00000295704 CLIP1P30622 1438 aa23.59■■□□□ 1.37
RNF25-201ENST00000295704 VPS8Q8N3P4 1428 aa23.54■■□□□ 1.36
RNF25-201ENST00000295704 BIVM-ERCC5R4GMW8 1640 aa23.53■■□□□ 1.36
RNF25-201ENST00000295704 RAPGEF2Q9Y4G8 1499 aa23.49■■□□□ 1.35
RNF25-201ENST00000295704 TTBK1Q5TCY1 1321 aaPredicted RBP23.47■■□□□ 1.35
RNF25-201ENST00000295704 SCAF1Q9H7N4 1312 aaKnown RBP23.44■■□□□ 1.34
RNF25-201ENST00000295704 ERICH3Q5RHP9 1530 aa23.44■■□□□ 1.34
RNF25-201ENST00000295704 DIEXFQ68CQ4 756 aaKnown RBP23.44■■□□□ 1.34
RNF25-201ENST00000295704 PRXQ9BXM0 1461 aa23.39■■□□□ 1.33
RNF25-201ENST00000295704 APLP2Q06481 763 aa23.37■■□□□ 1.33
RNF25-201ENST00000295704 PELP1Q8IZL8 1130 aaKnown RBP23.34■■□□□ 1.33
RNF25-201ENST00000295704 ZNF316A6NFI3 1004 aaPredicted RBP23.33■■□□□ 1.33
RNF25-201ENST00000295704 ACIN1Q9UKV3 1341 aaKnown RBP23.33■■□□□ 1.33
RNF25-201ENST00000295704 CFTRP13569 1480 aa23.28■■□□□ 1.32
RNF25-201ENST00000295704 CUX1P39880 1505 aa23.26■■□□□ 1.31
RNF25-201ENST00000295704 KIF27Q86VH2 1401 aa23.24■■□□□ 1.31
RNF25-201ENST00000295704 CENPBP07199 599 aaPredicted RBP23.23■■□□□ 1.31
RNF25-201ENST00000295704 HNRNPUL2Q1KMD3 747 aaKnown RBP23.23■■□□□ 1.31
RNF25-201ENST00000295704 ARAP1Q96P48 1450 aa23.19■■□□□ 1.3
RNF25-201ENST00000295704 CLSPNQ9HAW4 1339 aa23.19■■□□□ 1.3
RNF25-201ENST00000295704 NEUROD1Q13562 356 aa23.18■■□□□ 1.3
RNF25-201ENST00000295704 NESP48681 1621 aa23.17■■□□□ 1.3
RNF25-201ENST00000295704 PRDM2Q13029 1718 aa23.12■■□□□ 1.29
RNF25-201ENST00000295704 CADPSQ9ULU8 1353 aa23.06■■□□□ 1.28
RNF25-201ENST00000295704 RRBP1Q9P2E9 1410 aaKnown RBP23.05■■□□□ 1.28
RNF25-201ENST00000295704 RANGAP1P46060 587 aaPredicted RBP23.04■■□□□ 1.28
RNF25-201ENST00000295704 ARHGAP35Q9NRY4 1499 aa23■■□□□ 1.27
RNF25-201ENST00000295704 KANK4Q5T7N3 995 aaPredicted RBP23■■□□□ 1.27
RNF25-201ENST00000295704 CUX2O14529 1486 aa22.99■■□□□ 1.27
RNF25-201ENST00000295704 DHX57Q6P158 1386 aaKnown RBP22.98■■□□□ 1.27
RNF25-201ENST00000295704 IGF1RP08069 1367 aa22.97■■□□□ 1.27
RNF25-201ENST00000295704 LAMC3Q9Y6N6 1575 aa22.96■■□□□ 1.27
RNF25-201ENST00000295704 MAP3K1Q13233 1512 aa22.96■■□□□ 1.27
RNF25-201ENST00000295704 GTF3C3Q9Y5Q9 886 aa22.95■■□□□ 1.26
RNF25-201ENST00000295704 MIER1Q8N108 512 aa22.88■■□□□ 1.25
RNF25-201ENST00000295704 CCNB3Q8WWL7 1395 aa22.88■■□□□ 1.25
RNF25-201ENST00000295704 KIF21AQ7Z4S6 1674 aa22.86■■□□□ 1.25
RNF25-201ENST00000295704 CARMIL1Q5VZK9 1371 aa22.85■■□□□ 1.25
RNF25-201ENST00000295704 FANCD2Q9BXW9 1451 aa22.83■■□□□ 1.25
RNF25-201ENST00000295704 FGD5Q6ZNL6 1462 aa22.82■■□□□ 1.24
RNF25-201ENST00000295704 TIAM1Q13009 1591 aa22.79■■□□□ 1.24
RNF25-201ENST00000295704 PDS5BQ9NTI5 1447 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms