RNA–Protein interactions for RNA: ENST00000293618.12

LARP4-201, Transcript of La ribonucleoprotein domain family member 4, humanhuman

TSL 1 (best) BASIC

Gene LARP4, Length 6,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-201ENST00000293618 NISCHQ9Y2I1 1504 aa22.28■■□□□ 1.16
LARP4-201ENST00000293618 DCAF8L2P0C7V8 631 aa22.06■■□□□ 1.12
LARP4-201ENST00000293618 SUPT5HO00267 1087 aaKnown RBP21.98■■□□□ 1.11
LARP4-201ENST00000293618 PELP1Q8IZL8 1130 aaKnown RBP21.8■■□□□ 1.08
LARP4-201ENST00000293618 MYT1Q01538 1121 aa21.54■■□□□ 1.04
LARP4-201ENST00000293618 PCGF6Q9BYE7 350 aa21.35■■□□□ 1.01
LARP4-201ENST00000293618 SHROOM4Q9ULL8 1493 aa21.35■■□□□ 1.01
LARP4-201ENST00000293618 ZEB1P37275 1124 aaPredicted RBP21.34■■□□□ 1.01
LARP4-201ENST00000293618 CENPBP07199 599 aaPredicted RBP21.21■□□□□ 0.99
LARP4-201ENST00000293618 HRCP23327 699 aa20.97■□□□□ 0.95
LARP4-201ENST00000293618 APLP2Q06481 763 aa20.74■□□□□ 0.91
LARP4-201ENST00000293618 EHMT2Q96KQ7 1210 aa20.74■□□□□ 0.91
LARP4-201ENST00000293618 CCER1Q8TC90 406 aaPredicted RBP20.66■□□□□ 0.9
LARP4-201ENST00000293618 TRIM26Q12899 539 aaPredicted RBP20.62■□□□□ 0.89
LARP4-201ENST00000293618 FAM9AQ8IZU1 332 aaPredicted RBP20.57■□□□□ 0.88
LARP4-201ENST00000293618 ERICH6Q7L0X2 663 aa20.55■□□□□ 0.88
LARP4-201ENST00000293618 TRIM41Q8WV44 630 aa20.47■□□□□ 0.87
LARP4-201ENST00000293618 NEFLP07196 543 aa20.31■□□□□ 0.84
LARP4-201ENST00000293618 CHIC1Q5VXU3 224 aa20.24■□□□□ 0.83
LARP4-201ENST00000293618 YTHDC1Q96MU7 727 aaKnown RBP20.23■□□□□ 0.83
LARP4-201ENST00000293618 TTBK1Q5TCY1 1321 aaPredicted RBP20.23■□□□□ 0.83
LARP4-201ENST00000293618 PPARGC1BQ86YN6 1023 aaKnown RBP20.17■□□□□ 0.82
LARP4-201ENST00000293618 UBTFP17480 764 aaKnown RBP19.98■□□□□ 0.79
LARP4-201ENST00000293618 LOC105371045A0A1W2PR82 267 aa19.96■□□□□ 0.79
LARP4-201ENST00000293618 DIEXFQ68CQ4 756 aaKnown RBP19.93■□□□□ 0.78
LARP4-201ENST00000293618 GTF3C3Q9Y5Q9 886 aa19.8■□□□□ 0.76
LARP4-201ENST00000293618 ACIN1Q9UKV3 1341 aaKnown RBP19.73■□□□□ 0.75
LARP4-201ENST00000293618 RANGAP1P46060 587 aaPredicted RBP19.68■□□□□ 0.74
LARP4-201ENST00000293618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.66■□□□□ 0.74
LARP4-201ENST00000293618 HNRNPUL2Q1KMD3 747 aaKnown RBP19.51■□□□□ 0.71
LARP4-201ENST00000293618 CLSPNQ9HAW4 1339 aa19.51■□□□□ 0.71
LARP4-201ENST00000293618 DAXXQ9UER7 740 aaPredicted RBP19.5■□□□□ 0.71
LARP4-201ENST00000293618 RTL5Q5HYW3 569 aaPredicted RBP19.49■□□□□ 0.71
LARP4-201ENST00000293618 ZNF316A6NFI3 1004 aaPredicted RBP19.47■□□□□ 0.71
LARP4-201ENST00000293618 ATP1B4Q9UN42 357 aaPredicted RBP19.45■□□□□ 0.7
LARP4-201ENST00000293618 DCAF1Q9Y4B6 1507 aa19.42■□□□□ 0.7
LARP4-201ENST00000293618 SCAF1Q9H7N4 1312 aaKnown RBP19.26■□□□□ 0.67
LARP4-201ENST00000293618 CDK11AQ9UQ88 783 aaPredicted RBP19.25■□□□□ 0.67
LARP4-201ENST00000293618 ITGAEP38570 1179 aa19.24■□□□□ 0.67
LARP4-201ENST00000293618 NEUROD1Q13562 356 aa19.18■□□□□ 0.66
LARP4-201ENST00000293618 MYT1LQ9UL68 1186 aa19.18■□□□□ 0.66
LARP4-201ENST00000293618 BCANQ96GW7 911 aa19.15■□□□□ 0.66
LARP4-201ENST00000293618 ANP32CO43423 234 aa19.12■□□□□ 0.65
LARP4-201ENST00000293618 POLR3GLQ9BT43 218 aa18.97■□□□□ 0.63
LARP4-201ENST00000293618 ANP32AP39687 249 aaKnown RBP18.91■□□□□ 0.62
LARP4-201ENST00000293618 FKBP8Q14318 412 aa18.86■□□□□ 0.61
LARP4-201ENST00000293618 CSRNP3Q8WYN3 585 aa18.82■□□□□ 0.6
LARP4-201ENST00000293618 FAM50AQ14320 339 aaKnown RBP18.82■□□□□ 0.6
LARP4-201ENST00000293618 ANP32EQ9BTT0 268 aa18.79■□□□□ 0.6
LARP4-201ENST00000293618 CNGB1Q14028 1251 aaPredicted RBP18.75■□□□□ 0.59
LARP4-201ENST00000293618 MIER1Q8N108 512 aa18.73■□□□□ 0.59
LARP4-201ENST00000293618 CCDC180Q9P1Z9 1646 aa18.72■□□□□ 0.59
LARP4-201ENST00000293618 TRIM52Q96A61 297 aa18.65■□□□□ 0.58
LARP4-201ENST00000293618 MYO15BQ96JP2 1530 aa18.65■□□□□ 0.58
LARP4-201ENST00000293618 GLIPR1L2Q4G1C9 344 aa18.65■□□□□ 0.58
LARP4-201ENST00000293618 EIF5BO60841 1220 aaKnown RBP18.61■□□□□ 0.57
LARP4-201ENST00000293618 ZCCHC6Q5VYS8 1495 aaKnown RBP18.6■□□□□ 0.57
LARP4-201ENST00000293618 HNRNPUQ00839 825 aaKnown RBP eCLIP18.58■□□□□ 0.56
LARP4-201ENST00000293618 ZBTB47Q9UFB7 747 aaPredicted RBP18.57■□□□□ 0.56
LARP4-201ENST00000293618 DDX10Q13206 875 aaKnown RBP18.55■□□□□ 0.56
LARP4-201ENST00000293618 TONSLQ96HA7 1378 aa18.48■□□□□ 0.55
LARP4-201ENST00000293618 NPM2Q86SE8 214 aaKnown RBP18.48■□□□□ 0.55
LARP4-201ENST00000293618 CCDC136Q96JN2 1154 aa18.45■□□□□ 0.54
LARP4-201ENST00000293618 NBR1Q14596 966 aa18.42■□□□□ 0.54
LARP4-201ENST00000293618 BCL11AQ9H165 835 aa18.39■□□□□ 0.53
LARP4-201ENST00000293618 SUPT16HQ9Y5B9 1047 aaKnown RBP18.39■□□□□ 0.53
LARP4-201ENST00000293618 ANP32BQ92688 251 aaKnown RBP18.36■□□□□ 0.53
LARP4-201ENST00000293618 ZNF326Q5BKZ1 582 aaKnown RBP18.36■□□□□ 0.53
LARP4-201ENST00000293618 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.52
LARP4-201ENST00000293618 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.52
LARP4-201ENST00000293618 EEA1Q15075 1411 aa18.32■□□□□ 0.52
LARP4-201ENST00000293618 UPF2Q9HAU5 1272 aaKnown RBP18.31■□□□□ 0.52
LARP4-201ENST00000293618 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
LARP4-201ENST00000293618 MRS2Q9HD23 443 aa18.27■□□□□ 0.51
LARP4-201ENST00000293618 DDRGK1Q96HY6 314 aa18.25■□□□□ 0.51
LARP4-201ENST00000293618 PPM1GO15355 546 aaPredicted RBP18.24■□□□□ 0.51
LARP4-201ENST00000293618 CLIP1P30622 1438 aa18.23■□□□□ 0.51
LARP4-201ENST00000293618 CEP162Q5TB80 1403 aa18.23■□□□□ 0.51
LARP4-201ENST00000293618 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.21■□□□□ 0.51
LARP4-201ENST00000293618 PPP4R2Q9NY27 417 aa18.21■□□□□ 0.51
LARP4-201ENST00000293618 TMC1Q8TDI8 760 aa18.21■□□□□ 0.5
LARP4-201ENST00000293618 TNIKQ9UKE5 1360 aa18.19■□□□□ 0.5
LARP4-201ENST00000293618 IRX6P78412 446 aaPredicted RBP18.17■□□□□ 0.5
LARP4-201ENST00000293618 ERICH6BQ5W0A0 696 aa18.16■□□□□ 0.5
LARP4-201ENST00000293618 NOP58Q9Y2X3 529 aaKnown RBP18.15■□□□□ 0.5
LARP4-201ENST00000293618 RBM19Q9Y4C8 960 aaKnown RBP18.14■□□□□ 0.5
LARP4-201ENST00000293618 EIF4G2P78344 907 aaKnown RBP eCLIP18.14■□□□□ 0.493e-7■■■■■ 29.3
LARP4-201ENST00000293618 GOLGA3Q08378 1498 aa18.13■□□□□ 0.49
LARP4-201ENST00000293618 HSP90AA1P07900 732 aaKnown RBP18.11■□□□□ 0.49
LARP4-201ENST00000293618 NEFMP07197 916 aa18.11■□□□□ 0.49
LARP4-201ENST00000293618 TIMELESSQ9UNS1 1208 aa18.09■□□□□ 0.49
LARP4-201ENST00000293618 RSF1Q96T23 1441 aaPredicted RBP18.09■□□□□ 0.49
LARP4-201ENST00000293618 CCER2I3L3R5 266 aa18.09■□□□□ 0.49
LARP4-201ENST00000293618 P3H3Q8IVL6 736 aa18.09■□□□□ 0.49
LARP4-201ENST00000293618 TSHZ2Q9NRE2 1034 aa18.07■□□□□ 0.48
LARP4-201ENST00000293618 BECN1Q14457 450 aa18.06■□□□□ 0.48
LARP4-201ENST00000293618 ABCC9O60706 1549 aa18.05■□□□□ 0.48
LARP4-201ENST00000293618 DEKP35659 375 aaKnown RBP18.05■□□□□ 0.48
LARP4-201ENST00000293618 PABPN1Q86U42 306 aaKnown RBP eCLIP18.04■□□□□ 0.48
LARP4-201ENST00000293618 HIRIP3Q9BW71 556 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms