RNA–Protein interactions for RNA: ENST00000291281.8

PRKD2-201, Transcript of protein kinase D2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKD2, Length 3,070 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-201ENST00000291281 NISCHQ9Y2I1 1504 aa30.94■■■□□ 2.54
PRKD2-201ENST00000291281 DCAF8L2P0C7V8 631 aa26.67■■□□□ 1.86
PRKD2-201ENST00000291281 SHROOM4Q9ULL8 1493 aa26.55■■□□□ 1.84
PRKD2-201ENST00000291281 CCDC180Q9P1Z9 1646 aa26.26■■□□□ 1.79
PRKD2-201ENST00000291281 ZCCHC6Q5VYS8 1495 aaKnown RBP25.97■■□□□ 1.75
PRKD2-201ENST00000291281 SUPT5HO00267 1087 aaKnown RBP25.89■■□□□ 1.73
PRKD2-201ENST00000291281 HRCP23327 699 aa25.6■■□□□ 1.69
PRKD2-201ENST00000291281 PELP1Q8IZL8 1130 aaKnown RBP25.59■■□□□ 1.69
PRKD2-201ENST00000291281 MYO15BQ96JP2 1530 aa25.53■■□□□ 1.68
PRKD2-201ENST00000291281 CHIC1Q5VXU3 224 aa25.5■■□□□ 1.67
PRKD2-201ENST00000291281 ABCC9O60706 1549 aa25.5■■□□□ 1.67
PRKD2-201ENST00000291281 PCGF6Q9BYE7 350 aa25.14■■□□□ 1.62
PRKD2-201ENST00000291281 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
PRKD2-201ENST00000291281 MYT1Q01538 1121 aa25.09■■□□□ 1.61
PRKD2-201ENST00000291281 SCRIBQ14160 1630 aa24.96■■□□□ 1.59
PRKD2-201ENST00000291281 PPARGC1BQ86YN6 1023 aaKnown RBP24.83■■□□□ 1.57
PRKD2-201ENST00000291281 LOC105371045A0A1W2PR82 267 aa24.67■■□□□ 1.54
PRKD2-201ENST00000291281 TRIM26Q12899 539 aaPredicted RBP24.66■■□□□ 1.54
PRKD2-201ENST00000291281 NACADO15069 1562 aa24.62■■□□□ 1.53
PRKD2-201ENST00000291281 PABPN1Q86U42 306 aaKnown RBP eCLIP24.48■■□□□ 1.51
PRKD2-201ENST00000291281 ZEB1P37275 1124 aaPredicted RBP24.42■■□□□ 1.5
PRKD2-201ENST00000291281 RB1CC1Q8TDY2 1594 aa24.41■■□□□ 1.5
PRKD2-201ENST00000291281 RSF1Q96T23 1441 aaPredicted RBP24.37■■□□□ 1.49
PRKD2-201ENST00000291281 CECR2Q9BXF3 1484 aa24.37■■□□□ 1.49
PRKD2-201ENST00000291281 TRIM41Q8WV44 630 aa24.14■■□□□ 1.46
PRKD2-201ENST00000291281 MROH2BQ7Z745 1585 aa24.12■■□□□ 1.45
PRKD2-201ENST00000291281 TTBK1Q5TCY1 1321 aaPredicted RBP24.04■■□□□ 1.44
PRKD2-201ENST00000291281 EHMT2Q96KQ7 1210 aa23.99■■□□□ 1.43
PRKD2-201ENST00000291281 FAM9AQ8IZU1 332 aaPredicted RBP23.97■■□□□ 1.43
PRKD2-201ENST00000291281 WIZO95785 1651 aa23.9■■□□□ 1.42
PRKD2-201ENST00000291281 SCAF1Q9H7N4 1312 aaKnown RBP23.84■■□□□ 1.41
PRKD2-201ENST00000291281 UNC13AQ9UPW8 1703 aa23.81■■□□□ 1.4
PRKD2-201ENST00000291281 PRKCSHP14314 528 aaPredicted RBP23.78■■□□□ 1.4
PRKD2-201ENST00000291281 BAZ1AQ9NRL2 1556 aaPredicted RBP23.78■■□□□ 1.4
PRKD2-201ENST00000291281 BICRAQ9NZM4 1560 aa23.71■■□□□ 1.39
PRKD2-201ENST00000291281 SMARCA4P51532 1647 aa23.62■■□□□ 1.37
PRKD2-201ENST00000291281 EIF4G1Q04637 1599 aaKnown RBP23.57■■□□□ 1.36
PRKD2-201ENST00000291281 ACIN1Q9UKV3 1341 aaKnown RBP23.5■■□□□ 1.35
PRKD2-201ENST00000291281 CCDC88BA6NC98 1476 aa23.5■■□□□ 1.35
PRKD2-201ENST00000291281 CCER1Q8TC90 406 aaPredicted RBP23.48■■□□□ 1.35
PRKD2-201ENST00000291281 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.46■■□□□ 1.35
PRKD2-201ENST00000291281 WRNQ14191 1432 aaPredicted RBP eCLIP23.45■■□□□ 1.34
PRKD2-201ENST00000291281 TOP2AP11388 1531 aaKnown RBP23.42■■□□□ 1.34
PRKD2-201ENST00000291281 NEUROD1Q13562 356 aa23.36■■□□□ 1.33
PRKD2-201ENST00000291281 CENPBP07199 599 aaPredicted RBP23.33■■□□□ 1.32
PRKD2-201ENST00000291281 DIEXFQ68CQ4 756 aaKnown RBP23.32■■□□□ 1.32
PRKD2-201ENST00000291281 BCL11AQ9H165 835 aa23.32■■□□□ 1.32
PRKD2-201ENST00000291281 ATAD2BQ9ULI0 1458 aa23.31■■□□□ 1.32
PRKD2-201ENST00000291281 SMARCA2P51531 1590 aa23.3■■□□□ 1.32
PRKD2-201ENST00000291281 ABCC8Q09428 1581 aa23.29■■□□□ 1.32
PRKD2-201ENST00000291281 BAZ1BQ9UIG0 1483 aaKnown RBP23.27■■□□□ 1.32
PRKD2-201ENST00000291281 CEP162Q5TB80 1403 aa23.26■■□□□ 1.31
PRKD2-201ENST00000291281 TNIKQ9UKE5 1360 aa23.21■■□□□ 1.31
PRKD2-201ENST00000291281 EEA1Q15075 1411 aa23.19■■□□□ 1.3
PRKD2-201ENST00000291281 GTF3C3Q9Y5Q9 886 aa23.18■■□□□ 1.3
PRKD2-201ENST00000291281 ERICH6Q7L0X2 663 aa23.12■■□□□ 1.29
PRKD2-201ENST00000291281 SOGA1O94964 1423 aa23.07■■□□□ 1.28
PRKD2-201ENST00000291281 ZNF316A6NFI3 1004 aaPredicted RBP23.05■■□□□ 1.28
PRKD2-201ENST00000291281 PEG3Q9GZU2 1588 aa23.02■■□□□ 1.28
PRKD2-201ENST00000291281 CSRNP3Q8WYN3 585 aa23.01■■□□□ 1.27
PRKD2-201ENST00000291281 GOLGA3Q08378 1498 aa23■■□□□ 1.27
PRKD2-201ENST00000291281 APLP2Q06481 763 aa23■■□□□ 1.27
PRKD2-201ENST00000291281 UBTFP17480 764 aaKnown RBP23■■□□□ 1.27
PRKD2-201ENST00000291281 RANGAP1P46060 587 aaPredicted RBP22.98■■□□□ 1.27
PRKD2-201ENST00000291281 RUSC2Q8N2Y8 1516 aa22.94■■□□□ 1.26
PRKD2-201ENST00000291281 NCAPD3P42695 1498 aa22.88■■□□□ 1.25
PRKD2-201ENST00000291281 KIF21BO75037 1637 aa22.83■■□□□ 1.25
PRKD2-201ENST00000291281 CEP164Q9UPV0 1460 aa22.82■■□□□ 1.24
PRKD2-201ENST00000291281 DNAJC5BQ9UF47 199 aa22.74■■□□□ 1.23
PRKD2-201ENST00000291281 SYNJ1O43426 1573 aa22.74■■□□□ 1.23
PRKD2-201ENST00000291281 MIER1Q8N108 512 aa22.72■■□□□ 1.23
PRKD2-201ENST00000291281 CLIP1P30622 1438 aa22.72■■□□□ 1.23
PRKD2-201ENST00000291281 VPS8Q8N3P4 1428 aa22.72■■□□□ 1.23
PRKD2-201ENST00000291281 YTHDC1Q96MU7 727 aaKnown RBP22.7■■□□□ 1.22
PRKD2-201ENST00000291281 HMGXB3Q12766 1538 aa22.68■■□□□ 1.22
PRKD2-201ENST00000291281 CC2D2AQ9P2K1 1620 aa22.68■■□□□ 1.22
PRKD2-201ENST00000291281 HNRNPUL2Q1KMD3 747 aaKnown RBP22.66■■□□□ 1.22
PRKD2-201ENST00000291281 SLC24A1O60721 1099 aa22.65■■□□□ 1.22
PRKD2-201ENST00000291281 CLSPNQ9HAW4 1339 aa22.58■■□□□ 1.21
PRKD2-201ENST00000291281 CADPSQ9ULU8 1353 aa22.56■■□□□ 1.2
PRKD2-201ENST00000291281 CFTRP13569 1480 aa22.55■■□□□ 1.2
PRKD2-201ENST00000291281 RAPGEF2Q9Y4G8 1499 aa22.52■■□□□ 1.19
PRKD2-201ENST00000291281 NESP48681 1621 aa22.46■■□□□ 1.19
PRKD2-201ENST00000291281 CUX1P39880 1505 aa22.45■■□□□ 1.18
PRKD2-201ENST00000291281 DHX57Q6P158 1386 aaKnown RBP22.42■■□□□ 1.18
PRKD2-201ENST00000291281 TOP2BQ02880 1626 aa22.4■■□□□ 1.18
PRKD2-201ENST00000291281 ERICH3Q5RHP9 1530 aa22.39■■□□□ 1.17
PRKD2-201ENST00000291281 FANCD2Q9BXW9 1451 aa22.33■■□□□ 1.16
PRKD2-201ENST00000291281 BIVM-ERCC5R4GMW8 1640 aa22.32■■□□□ 1.16
PRKD2-201ENST00000291281 KIF27Q86VH2 1401 aa22.32■■□□□ 1.16
PRKD2-201ENST00000291281 ARAP1Q96P48 1450 aa22.31■■□□□ 1.16
PRKD2-201ENST00000291281 CUX2O14529 1486 aa22.3■■□□□ 1.16
PRKD2-201ENST00000291281 PRXQ9BXM0 1461 aa22.3■■□□□ 1.16
PRKD2-201ENST00000291281 RRBP1Q9P2E9 1410 aaKnown RBP22.28■■□□□ 1.16
PRKD2-201ENST00000291281 SUPT16HQ9Y5B9 1047 aaKnown RBP22.25■■□□□ 1.15
PRKD2-201ENST00000291281 FGD5Q6ZNL6 1462 aa22.23■■□□□ 1.15
PRKD2-201ENST00000291281 P3H3Q8IVL6 736 aa22.21■■□□□ 1.15
PRKD2-201ENST00000291281 RAD54L2Q9Y4B4 1467 aa22.2■■□□□ 1.14
PRKD2-201ENST00000291281 ATP1B4Q9UN42 357 aaPredicted RBP22.17■■□□□ 1.14
PRKD2-201ENST00000291281 ANP32EQ9BTT0 268 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms