RNA–Protein interactions for RNA: ENST00000289746.2

CDH15-201, Transcript of cadherin 15, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH15, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15-201ENST00000289746 NISCHQ9Y2I1 1504 aa32.32■■■□□ 2.76
CDH15-201ENST00000289746 SHROOM4Q9ULL8 1493 aa28.33■■■□□ 2.13
CDH15-201ENST00000289746 SUPT5HO00267 1087 aaKnown RBP27.96■■■□□ 2.07
CDH15-201ENST00000289746 ZCCHC6Q5VYS8 1495 aaKnown RBP27.36■■□□□ 1.97
CDH15-201ENST00000289746 DCAF8L2P0C7V8 631 aa27.34■■□□□ 1.97
CDH15-201ENST00000289746 CHIC1Q5VXU3 224 aa27.12■■□□□ 1.93
CDH15-201ENST00000289746 MYO15BQ96JP2 1530 aa27.08■■□□□ 1.93
CDH15-201ENST00000289746 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
CDH15-201ENST00000289746 HRCP23327 699 aa26.86■■□□□ 1.89
CDH15-201ENST00000289746 PCGF6Q9BYE7 350 aa26.82■■□□□ 1.88
CDH15-201ENST00000289746 LOC105371045A0A1W2PR82 267 aa26.52■■□□□ 1.84
CDH15-201ENST00000289746 PPARGC1BQ86YN6 1023 aaKnown RBP26.5■■□□□ 1.83
CDH15-201ENST00000289746 DCAF1Q9Y4B6 1507 aa26.28■■□□□ 1.8
CDH15-201ENST00000289746 TRIM26Q12899 539 aaPredicted RBP26.02■■□□□ 1.76
CDH15-201ENST00000289746 FAM9AQ8IZU1 332 aaPredicted RBP25.9■■□□□ 1.74
CDH15-201ENST00000289746 ABCC9O60706 1549 aa25.87■■□□□ 1.73
CDH15-201ENST00000289746 TRIM41Q8WV44 630 aa25.87■■□□□ 1.73
CDH15-201ENST00000289746 EHMT2Q96KQ7 1210 aa25.87■■□□□ 1.73
CDH15-201ENST00000289746 SCRIBQ14160 1630 aa25.83■■□□□ 1.73
CDH15-201ENST00000289746 RSF1Q96T23 1441 aaPredicted RBP25.82■■□□□ 1.72
CDH15-201ENST00000289746 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
CDH15-201ENST00000289746 ZEB1P37275 1124 aaPredicted RBP25.51■■□□□ 1.67
CDH15-201ENST00000289746 CECR2Q9BXF3 1484 aa25.37■■□□□ 1.65
CDH15-201ENST00000289746 MROH2BQ7Z745 1585 aa25.26■■□□□ 1.63
CDH15-201ENST00000289746 WIZO95785 1651 aa25.13■■□□□ 1.61
CDH15-201ENST00000289746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.12■■□□□ 1.61
CDH15-201ENST00000289746 TTBK1Q5TCY1 1321 aaPredicted RBP25.08■■□□□ 1.61
CDH15-201ENST00000289746 NACADO15069 1562 aa25.07■■□□□ 1.6
CDH15-201ENST00000289746 SCAF1Q9H7N4 1312 aaKnown RBP25.06■■□□□ 1.6
CDH15-201ENST00000289746 CCER1Q8TC90 406 aaPredicted RBP25.04■■□□□ 1.6
CDH15-201ENST00000289746 BAZ1AQ9NRL2 1556 aaPredicted RBP24.84■■□□□ 1.57
CDH15-201ENST00000289746 ABCC8Q09428 1581 aa24.8■■□□□ 1.56
CDH15-201ENST00000289746 CCDC88BA6NC98 1476 aa24.76■■□□□ 1.55
CDH15-201ENST00000289746 EIF4G1Q04637 1599 aaKnown RBP24.72■■□□□ 1.55
CDH15-201ENST00000289746 PELP1Q8IZL8 1130 aaKnown RBP24.71■■□□□ 1.55
CDH15-201ENST00000289746 DIEXFQ68CQ4 756 aaKnown RBP24.67■■□□□ 1.54
CDH15-201ENST00000289746 UBTFP17480 764 aaKnown RBP24.67■■□□□ 1.54
CDH15-201ENST00000289746 NEUROD1Q13562 356 aa24.67■■□□□ 1.54
CDH15-201ENST00000289746 SOGA1O94964 1423 aa24.66■■□□□ 1.54
CDH15-201ENST00000289746 CEP162Q5TB80 1403 aa24.66■■□□□ 1.54
CDH15-201ENST00000289746 ACIN1Q9UKV3 1341 aaKnown RBP24.65■■□□□ 1.54
CDH15-201ENST00000289746 TOP2AP11388 1531 aaKnown RBP24.61■■□□□ 1.53
CDH15-201ENST00000289746 CSRNP3Q8WYN3 585 aa24.56■■□□□ 1.52
CDH15-201ENST00000289746 WRNQ14191 1432 aaPredicted RBP eCLIP24.54■■□□□ 1.52
CDH15-201ENST00000289746 RUSC2Q8N2Y8 1516 aa24.53■■□□□ 1.52
CDH15-201ENST00000289746 SMARCA2P51531 1590 aa24.53■■□□□ 1.52
CDH15-201ENST00000289746 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
CDH15-201ENST00000289746 TNIKQ9UKE5 1360 aa24.51■■□□□ 1.51
CDH15-201ENST00000289746 GTF3C3Q9Y5Q9 886 aa24.48■■□□□ 1.51
CDH15-201ENST00000289746 CENPBP07199 599 aaPredicted RBP24.46■■□□□ 1.51
CDH15-201ENST00000289746 PABPN1Q86U42 306 aaKnown RBP eCLIP24.44■■□□□ 1.5
CDH15-201ENST00000289746 HNRNPUL2Q1KMD3 747 aaKnown RBP24.39■■□□□ 1.49
CDH15-201ENST00000289746 ZNF316A6NFI3 1004 aaPredicted RBP24.34■■□□□ 1.49
CDH15-201ENST00000289746 RANGAP1P46060 587 aaPredicted RBP24.34■■□□□ 1.49
CDH15-201ENST00000289746 YTHDC1Q96MU7 727 aaKnown RBP24.34■■□□□ 1.49
CDH15-201ENST00000289746 EEA1Q15075 1411 aa24.33■■□□□ 1.49
CDH15-201ENST00000289746 GOLGA3Q08378 1498 aa24.31■■□□□ 1.48
CDH15-201ENST00000289746 UNC13AQ9UPW8 1703 aa24.26■■□□□ 1.47
CDH15-201ENST00000289746 APLP2Q06481 763 aa24.15■■□□□ 1.46
CDH15-201ENST00000289746 CLIP1P30622 1438 aa24.14■■□□□ 1.45
CDH15-201ENST00000289746 MIER1Q8N108 512 aa24.13■■□□□ 1.45
CDH15-201ENST00000289746 CEP164Q9UPV0 1460 aa24.11■■□□□ 1.45
CDH15-201ENST00000289746 SYNJ1O43426 1573 aa24.08■■□□□ 1.45
CDH15-201ENST00000289746 BICRAQ9NZM4 1560 aa24■■□□□ 1.43
CDH15-201ENST00000289746 VPS8Q8N3P4 1428 aa23.99■■□□□ 1.43
CDH15-201ENST00000289746 RAPGEF2Q9Y4G8 1499 aa23.99■■□□□ 1.43
CDH15-201ENST00000289746 KIF21BO75037 1637 aa23.96■■□□□ 1.43
CDH15-201ENST00000289746 BAZ1BQ9UIG0 1483 aaKnown RBP23.89■■□□□ 1.41
CDH15-201ENST00000289746 ATAD2BQ9ULI0 1458 aa23.88■■□□□ 1.41
CDH15-201ENST00000289746 PEG3Q9GZU2 1588 aa23.87■■□□□ 1.41
CDH15-201ENST00000289746 KANK4Q5T7N3 995 aaPredicted RBP23.76■■□□□ 1.39
CDH15-201ENST00000289746 ITGAEP38570 1179 aa23.69■■□□□ 1.38
CDH15-201ENST00000289746 DHX57Q6P158 1386 aaKnown RBP23.69■■□□□ 1.38
CDH15-201ENST00000289746 TOP2BQ02880 1626 aa23.66■■□□□ 1.38
CDH15-201ENST00000289746 ARAP1Q96P48 1450 aa23.63■■□□□ 1.37
CDH15-201ENST00000289746 PRXQ9BXM0 1461 aa23.57■■□□□ 1.36
CDH15-201ENST00000289746 CLSPNQ9HAW4 1339 aa23.56■■□□□ 1.36
CDH15-201ENST00000289746 ERICH3Q5RHP9 1530 aa23.51■■□□□ 1.35
CDH15-201ENST00000289746 BIVM-ERCC5R4GMW8 1640 aa23.49■■□□□ 1.35
CDH15-201ENST00000289746 MYT1Q01538 1121 aa23.47■■□□□ 1.35
CDH15-201ENST00000289746 KIF27Q86VH2 1401 aa23.47■■□□□ 1.35
CDH15-201ENST00000289746 CUX1P39880 1505 aa23.46■■□□□ 1.35
CDH15-201ENST00000289746 CCNB3Q8WWL7 1395 aa23.44■■□□□ 1.34
CDH15-201ENST00000289746 RRBP1Q9P2E9 1410 aaKnown RBP23.43■■□□□ 1.34
CDH15-201ENST00000289746 SUPT16HQ9Y5B9 1047 aaKnown RBP23.42■■□□□ 1.34
CDH15-201ENST00000289746 ARHGAP35Q9NRY4 1499 aa23.38■■□□□ 1.33
CDH15-201ENST00000289746 KCNH8Q96L42 1107 aa23.37■■□□□ 1.33
CDH15-201ENST00000289746 ATP1B4Q9UN42 357 aaPredicted RBP23.33■■□□□ 1.33
CDH15-201ENST00000289746 RAB3GAP2Q9H2M9 1393 aa23.32■■□□□ 1.32
CDH15-201ENST00000289746 FAM50AQ14320 339 aaKnown RBP23.3■■□□□ 1.32
CDH15-201ENST00000289746 P3H3Q8IVL6 736 aa23.29■■□□□ 1.32
CDH15-201ENST00000289746 NCAPD3P42695 1498 aa23.28■■□□□ 1.32
CDH15-201ENST00000289746 SIN3AQ96ST3 1273 aa23.26■■□□□ 1.31
CDH15-201ENST00000289746 CUX2O14529 1486 aa23.25■■□□□ 1.31
CDH15-201ENST00000289746 DDX10Q13206 875 aaKnown RBP23.23■■□□□ 1.31
CDH15-201ENST00000289746 CFTRP13569 1480 aa23.22■■□□□ 1.31
CDH15-201ENST00000289746 IGF1RP08069 1367 aa23.21■■□□□ 1.31
CDH15-201ENST00000289746 HMGXB3Q12766 1538 aa23.21■■□□□ 1.31
CDH15-201ENST00000289746 BCANQ96GW7 911 aa23.2■■□□□ 1.3
CDH15-201ENST00000289746 HIRIP3Q9BW71 556 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms