RNA–Protein interactions for RNA: ENST00000284995.10

TSEN2-201, Transcript of tRNA splicing endonuclease subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN2-201ENST00000284995 NISCHQ9Y2I1 1504 aa33.92■■■■□ 3.02
TSEN2-201ENST00000284995 CCDC180Q9P1Z9 1646 aa29.27■■■□□ 2.28
TSEN2-201ENST00000284995 ZCCHC6Q5VYS8 1495 aaKnown RBP28.5■■■□□ 2.15
TSEN2-201ENST00000284995 DCAF8L2P0C7V8 631 aa28.38■■■□□ 2.13
TSEN2-201ENST00000284995 SHROOM4Q9ULL8 1493 aa28.23■■■□□ 2.11
TSEN2-201ENST00000284995 ABCC9O60706 1549 aa27.9■■■□□ 2.06
TSEN2-201ENST00000284995 DCAF1Q9Y4B6 1507 aa27.84■■■□□ 2.05
TSEN2-201ENST00000284995 MYO15BQ96JP2 1530 aa27.38■■□□□ 1.97
TSEN2-201ENST00000284995 SCRIBQ14160 1630 aa27.28■■□□□ 1.96
TSEN2-201ENST00000284995 NACADO15069 1562 aa27.27■■□□□ 1.96
TSEN2-201ENST00000284995 SUPT5HO00267 1087 aaKnown RBP27.26■■□□□ 1.95
TSEN2-201ENST00000284995 RB1CC1Q8TDY2 1594 aa27.04■■□□□ 1.92
TSEN2-201ENST00000284995 UNC13AQ9UPW8 1703 aa26.64■■□□□ 1.85
TSEN2-201ENST00000284995 CECR2Q9BXF3 1484 aa26.53■■□□□ 1.84
TSEN2-201ENST00000284995 PABPN1Q86U42 306 aaKnown RBP eCLIP26.49■■□□□ 1.83
TSEN2-201ENST00000284995 RSF1Q96T23 1441 aaPredicted RBP26.49■■□□□ 1.83
TSEN2-201ENST00000284995 BICRAQ9NZM4 1560 aa26.34■■□□□ 1.81
TSEN2-201ENST00000284995 MROH2BQ7Z745 1585 aa26.34■■□□□ 1.81
TSEN2-201ENST00000284995 WIZO95785 1651 aa26.15■■□□□ 1.78
TSEN2-201ENST00000284995 BAZ1AQ9NRL2 1556 aaPredicted RBP26.11■■□□□ 1.77
TSEN2-201ENST00000284995 CHIC1Q5VXU3 224 aa26.06■■□□□ 1.76
TSEN2-201ENST00000284995 SMARCA4P51532 1647 aa26.02■■□□□ 1.76
TSEN2-201ENST00000284995 TOP2AP11388 1531 aaKnown RBP25.7■■□□□ 1.71
TSEN2-201ENST00000284995 CCDC88BA6NC98 1476 aa25.6■■□□□ 1.69
TSEN2-201ENST00000284995 ATAD2BQ9ULI0 1458 aa25.59■■□□□ 1.69
TSEN2-201ENST00000284995 PEG3Q9GZU2 1588 aa25.57■■□□□ 1.68
TSEN2-201ENST00000284995 SMARCA2P51531 1590 aa25.55■■□□□ 1.68
TSEN2-201ENST00000284995 EIF4G1Q04637 1599 aaKnown RBP25.51■■□□□ 1.68
TSEN2-201ENST00000284995 TRIM41Q8WV44 630 aa25.45■■□□□ 1.66
TSEN2-201ENST00000284995 BAZ1BQ9UIG0 1483 aaKnown RBP25.44■■□□□ 1.66
TSEN2-201ENST00000284995 LOC105371045A0A1W2PR82 267 aa25.27■■□□□ 1.64
TSEN2-201ENST00000284995 NCAPD3P42695 1498 aa25.25■■□□□ 1.63
TSEN2-201ENST00000284995 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
TSEN2-201ENST00000284995 FAM9AQ8IZU1 332 aaPredicted RBP25.22■■□□□ 1.63
TSEN2-201ENST00000284995 HMGXB3Q12766 1538 aa25.16■■□□□ 1.62
TSEN2-201ENST00000284995 CC2D2AQ9P2K1 1620 aa25.13■■□□□ 1.61
TSEN2-201ENST00000284995 EHMT2Q96KQ7 1210 aa25.03■■□□□ 1.6
TSEN2-201ENST00000284995 WRNQ14191 1432 aaPredicted RBP eCLIP24.9■■□□□ 1.58
TSEN2-201ENST00000284995 SYNJ1O43426 1573 aa24.82■■□□□ 1.56
TSEN2-201ENST00000284995 DNAJC5BQ9UF47 199 aa24.81■■□□□ 1.56
TSEN2-201ENST00000284995 SOGA1O94964 1423 aa24.8■■□□□ 1.56
TSEN2-201ENST00000284995 CFTRP13569 1480 aa24.78■■□□□ 1.56
TSEN2-201ENST00000284995 RUSC2Q8N2Y8 1516 aa24.75■■□□□ 1.55
TSEN2-201ENST00000284995 CADPSQ9ULU8 1353 aa24.7■■□□□ 1.54
TSEN2-201ENST00000284995 NESP48681 1621 aa24.59■■□□□ 1.53
TSEN2-201ENST00000284995 TOP2BQ02880 1626 aa24.59■■□□□ 1.53
TSEN2-201ENST00000284995 CUX1P39880 1505 aa24.57■■□□□ 1.52
TSEN2-201ENST00000284995 CSRNP3Q8WYN3 585 aa24.57■■□□□ 1.52
TSEN2-201ENST00000284995 PRDM2Q13029 1718 aa24.53■■□□□ 1.52
TSEN2-201ENST00000284995 BIVM-ERCC5R4GMW8 1640 aa24.52■■□□□ 1.52
TSEN2-201ENST00000284995 EEA1Q15075 1411 aa24.46■■□□□ 1.51
TSEN2-201ENST00000284995 FANCD2Q9BXW9 1451 aa24.45■■□□□ 1.5
TSEN2-201ENST00000284995 UBTFP17480 764 aaKnown RBP24.37■■□□□ 1.49
TSEN2-201ENST00000284995 LAMC3Q9Y6N6 1575 aa24.31■■□□□ 1.48
TSEN2-201ENST00000284995 PCGF6Q9BYE7 350 aa24.29■■□□□ 1.48
TSEN2-201ENST00000284995 FGD5Q6ZNL6 1462 aa24.27■■□□□ 1.48
TSEN2-201ENST00000284995 GOLGA3Q08378 1498 aa24.27■■□□□ 1.48
TSEN2-201ENST00000284995 TNIKQ9UKE5 1360 aa24.25■■□□□ 1.47
TSEN2-201ENST00000284995 CEP164Q9UPV0 1460 aa24.23■■□□□ 1.47
TSEN2-201ENST00000284995 RAPGEF2Q9Y4G8 1499 aa24.23■■□□□ 1.47
TSEN2-201ENST00000284995 CEP162Q5TB80 1403 aa24.22■■□□□ 1.47
TSEN2-201ENST00000284995 KIF27Q86VH2 1401 aa24.2■■□□□ 1.46
TSEN2-201ENST00000284995 KIF21BO75037 1637 aa24.19■■□□□ 1.46
TSEN2-201ENST00000284995 TOPBP1Q92547 1522 aa24.19■■□□□ 1.46
TSEN2-201ENST00000284995 PPARGC1BQ86YN6 1023 aaKnown RBP24.19■■□□□ 1.46
TSEN2-201ENST00000284995 CUX2O14529 1486 aa24.18■■□□□ 1.46
TSEN2-201ENST00000284995 PDS5BQ9NTI5 1447 aa24.18■■□□□ 1.46
TSEN2-201ENST00000284995 DNMBPQ6XZF7 1577 aa24.17■■□□□ 1.46
TSEN2-201ENST00000284995 URB2Q14146 1524 aaKnown RBP24.16■■□□□ 1.46
TSEN2-201ENST00000284995 KIF21AQ7Z4S6 1674 aa24.16■■□□□ 1.46
TSEN2-201ENST00000284995 RAD54L2Q9Y4B4 1467 aa24.16■■□□□ 1.46
TSEN2-201ENST00000284995 RANGAP1P46060 587 aaPredicted RBP24.16■■□□□ 1.46
TSEN2-201ENST00000284995 POLA1P09884 1462 aaPredicted RBP24.12■■□□□ 1.45
TSEN2-201ENST00000284995 PRXQ9BXM0 1461 aa24.1■■□□□ 1.45
TSEN2-201ENST00000284995 IGF1RP08069 1367 aa24.06■■□□□ 1.44
TSEN2-201ENST00000284995 TRIM26Q12899 539 aaPredicted RBP24.02■■□□□ 1.44
TSEN2-201ENST00000284995 CLIP1P30622 1438 aa23.97■■□□□ 1.43
TSEN2-201ENST00000284995 ERICH3Q5RHP9 1530 aa23.97■■□□□ 1.43
TSEN2-201ENST00000284995 ABCA10Q8WWZ4 1543 aa23.96■■□□□ 1.43
TSEN2-201ENST00000284995 TTBK1Q5TCY1 1321 aaPredicted RBP23.96■■□□□ 1.43
TSEN2-201ENST00000284995 TDRD9Q8NDG6 1382 aaKnown RBP23.93■■□□□ 1.42
TSEN2-201ENST00000284995 CARMIL1Q5VZK9 1371 aa23.92■■□□□ 1.42
TSEN2-201ENST00000284995 MRC2Q9UBG0 1479 aa23.86■■□□□ 1.41
TSEN2-201ENST00000284995 WDR97A6NE52 1622 aa23.83■■□□□ 1.41
TSEN2-201ENST00000284995 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
TSEN2-201ENST00000284995 TARBP1Q13395 1621 aaKnown RBP23.78■■□□□ 1.4
TSEN2-201ENST00000284995 GAPVD1Q14C86 1478 aa23.76■■□□□ 1.39
TSEN2-201ENST00000284995 ABCA5Q8WWZ7 1642 aa23.74■■□□□ 1.39
TSEN2-201ENST00000284995 VPS8Q8N3P4 1428 aa23.73■■□□□ 1.39
TSEN2-201ENST00000284995 AQRO60306 1485 aaKnown RBP eCLIP23.73■■□□□ 1.396e-8■■■□□ 16
TSEN2-201ENST00000284995 ARAP1Q96P48 1450 aa23.71■■□□□ 1.39
TSEN2-201ENST00000284995 WDR62O43379 1518 aa23.69■■□□□ 1.38
TSEN2-201ENST00000284995 ARHGAP35Q9NRY4 1499 aa23.67■■□□□ 1.38
TSEN2-201ENST00000284995 ZNF608Q9ULD9 1512 aaPredicted RBP23.66■■□□□ 1.38
TSEN2-201ENST00000284995 CUL7Q14999 1698 aa23.65■■□□□ 1.38
TSEN2-201ENST00000284995 HRCP23327 699 aa23.64■■□□□ 1.38
TSEN2-201ENST00000284995 P3H3Q8IVL6 736 aa23.63■■□□□ 1.37
TSEN2-201ENST00000284995 THOC2Q8NI27 1593 aaKnown RBP23.62■■□□□ 1.37
TSEN2-201ENST00000284995 IFT140Q96RY7 1462 aa23.58■■□□□ 1.37
TSEN2-201ENST00000284995 APLP2Q06481 763 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms