RNA–Protein interactions for RNA: ENST00000284483.12

TNIK-201, Transcript of TRAF2 and NCK interacting kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIK, Length 4,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-201ENST00000284483 PELP1Q8IZL8 1130 aaKnown RBP15.93■□□□□ 0.14
TNIK-201ENST00000284483 MYT1Q01538 1121 aa15.51■□□□□ 0.07
TNIK-201ENST00000284483 HRCP23327 699 aa15.39■□□□□ 0.05
TNIK-201ENST00000284483 SUPT5HO00267 1087 aaKnown RBP15.26■□□□□ 0.03
TNIK-201ENST00000284483 PPARGC1BQ86YN6 1023 aaKnown RBP15.16■□□□□ 0.02
TNIK-201ENST00000284483 DCAF8L2P0C7V8 631 aa15.15■□□□□ 0.02
TNIK-201ENST00000284483 SCAF1Q9H7N4 1312 aaKnown RBP15.04■□□□□ -0
TNIK-201ENST00000284483 PCGF6Q9BYE7 350 aa14.97□□□□□ -0.01
TNIK-201ENST00000284483 SHROOM4Q9ULL8 1493 aa14.94□□□□□ -0.02
TNIK-201ENST00000284483 NISCHQ9Y2I1 1504 aa14.87□□□□□ -0.03
TNIK-201ENST00000284483 EHMT2Q96KQ7 1210 aa14.79□□□□□ -0.04
TNIK-201ENST00000284483 TTBK1Q5TCY1 1321 aaPredicted RBP14.76□□□□□ -0.05
TNIK-201ENST00000284483 PRKCSHP14314 528 aaPredicted RBP14.6□□□□□ -0.07
TNIK-201ENST00000284483 BCL11AQ9H165 835 aa14.55□□□□□ -0.08
TNIK-201ENST00000284483 FAM9AQ8IZU1 332 aaPredicted RBP14.44□□□□□ -0.1
TNIK-201ENST00000284483 ACIN1Q9UKV3 1341 aaKnown RBP14.39□□□□□ -0.11
TNIK-201ENST00000284483 GTF3C3Q9Y5Q9 886 aa14.37□□□□□ -0.11
TNIK-201ENST00000284483 NEUROD1Q13562 356 aa14.36□□□□□ -0.11
TNIK-201ENST00000284483 CENPBP07199 599 aaPredicted RBP14.3□□□□□ -0.12
TNIK-201ENST00000284483 MYO15BQ96JP2 1530 aa14.24□□□□□ -0.13
TNIK-201ENST00000284483 YTHDC1Q96MU7 727 aaKnown RBP14.24□□□□□ -0.13
TNIK-201ENST00000284483 ZEB1P37275 1124 aaPredicted RBP14.19□□□□□ -0.14
TNIK-201ENST00000284483 CCER1Q8TC90 406 aaPredicted RBP14.17□□□□□ -0.14
TNIK-201ENST00000284483 ERICH6Q7L0X2 663 aa14.14□□□□□ -0.15
TNIK-201ENST00000284483 LOC105371045A0A1W2PR82 267 aa14.1□□□□□ -0.15
TNIK-201ENST00000284483 APLP2Q06481 763 aa14.05□□□□□ -0.16
TNIK-201ENST00000284483 TRIM26Q12899 539 aaPredicted RBP14.05□□□□□ -0.16
TNIK-201ENST00000284483 ANP32EQ9BTT0 268 aa14□□□□□ -0.17
TNIK-201ENST00000284483 CHIC1Q5VXU3 224 aa13.97□□□□□ -0.17
TNIK-201ENST00000284483 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
TNIK-201ENST00000284483 TRIM41Q8WV44 630 aa13.9□□□□□ -0.18
TNIK-201ENST00000284483 DCAF1Q9Y4B6 1507 aa13.89□□□□□ -0.19
TNIK-201ENST00000284483 CCDC180Q9P1Z9 1646 aa13.84□□□□□ -0.19
TNIK-201ENST00000284483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.79□□□□□ -0.2
TNIK-201ENST00000284483 RANGAP1P46060 587 aaPredicted RBP13.78□□□□□ -0.2
TNIK-201ENST00000284483 DIEXFQ68CQ4 756 aaKnown RBP13.75□□□□□ -0.21
TNIK-201ENST00000284483 NEFLP07196 543 aa13.64□□□□□ -0.23
TNIK-201ENST00000284483 ANO8Q9HCE9 1232 aaPredicted RBP13.62□□□□□ -0.23
TNIK-201ENST00000284483 TSHZ2Q9NRE2 1034 aa13.61□□□□□ -0.23
TNIK-201ENST00000284483 UBTFP17480 764 aaKnown RBP13.59□□□□□ -0.23
TNIK-201ENST00000284483 HNRNPUL2Q1KMD3 747 aaKnown RBP13.53□□□□□ -0.24
TNIK-201ENST00000284483 BCANQ96GW7 911 aa13.52□□□□□ -0.25
TNIK-201ENST00000284483 SUPT16HQ9Y5B9 1047 aaKnown RBP13.45□□□□□ -0.26
TNIK-201ENST00000284483 SLC24A1O60721 1099 aa13.42□□□□□ -0.26
TNIK-201ENST00000284483 ITGAEP38570 1179 aa13.36□□□□□ -0.27
TNIK-201ENST00000284483 SALL2Q9Y467 1007 aaPredicted RBP13.35□□□□□ -0.27
TNIK-201ENST00000284483 MIER1Q8N108 512 aa13.35□□□□□ -0.27
TNIK-201ENST00000284483 UBE2Q2Q8WVN8 375 aa13.35□□□□□ -0.27
TNIK-201ENST00000284483 CCDC136Q96JN2 1154 aa13.34□□□□□ -0.27
TNIK-201ENST00000284483 EIF5BO60841 1220 aaKnown RBP13.32□□□□□ -0.28
TNIK-201ENST00000284483 ATP1B4Q9UN42 357 aaPredicted RBP13.32□□□□□ -0.28
TNIK-201ENST00000284483 ZNF316A6NFI3 1004 aaPredicted RBP13.3□□□□□ -0.28
TNIK-201ENST00000284483 CNGB1Q14028 1251 aaPredicted RBP13.27□□□□□ -0.29
TNIK-201ENST00000284483 CLSPNQ9HAW4 1339 aa13.23□□□□□ -0.29
TNIK-201ENST00000284483 RBM19Q9Y4C8 960 aaKnown RBP13.22□□□□□ -0.29
TNIK-201ENST00000284483 MSH5O43196 834 aa13.2□□□□□ -0.3
TNIK-201ENST00000284483 DEKP35659 375 aaKnown RBP13.18□□□□□ -0.3
TNIK-201ENST00000284483 PLEKHG5O94827 1062 aa13.17□□□□□ -0.3
TNIK-201ENST00000284483 RTL5Q5HYW3 569 aaPredicted RBP13.14□□□□□ -0.31
TNIK-201ENST00000284483 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.14□□□□□ -0.31
TNIK-201ENST00000284483 POLR3GLQ9BT43 218 aa13.1□□□□□ -0.31
TNIK-201ENST00000284483 FKBP8Q14318 412 aa13.08□□□□□ -0.31
TNIK-201ENST00000284483 PKNOX2Q96KN3 472 aa13.08□□□□□ -0.32
TNIK-201ENST00000284483 ERICH6BQ5W0A0 696 aa13.07□□□□□ -0.32
TNIK-201ENST00000284483 DAXXQ9UER7 740 aaPredicted RBP13.07□□□□□ -0.32
TNIK-201ENST00000284483 MYT1LQ9UL68 1186 aa13.04□□□□□ -0.32
TNIK-201ENST00000284483 CDK11AQ9UQ88 783 aaPredicted RBP13.03□□□□□ -0.32
TNIK-201ENST00000284483 RTN4Q9NQC3 1192 aaKnown RBP13□□□□□ -0.33
TNIK-201ENST00000284483 PODXL2Q9NZ53 605 aa12.97□□□□□ -0.33
TNIK-201ENST00000284483 IL27Q8NEV9 243 aa12.97□□□□□ -0.33
TNIK-201ENST00000284483 NBR1Q14596 966 aa12.93□□□□□ -0.34
TNIK-201ENST00000284483 TRIM52Q96A61 297 aa12.92□□□□□ -0.34
TNIK-201ENST00000284483 FANCIQ9NVI1 1328 aa12.91□□□□□ -0.34
TNIK-201ENST00000284483 ANP32CO43423 234 aa12.91□□□□□ -0.34
TNIK-201ENST00000284483 IRX6P78412 446 aaPredicted RBP12.88□□□□□ -0.35
TNIK-201ENST00000284483 DDX10Q13206 875 aaKnown RBP12.86□□□□□ -0.35
TNIK-201ENST00000284483 NPM2Q86SE8 214 aaKnown RBP12.85□□□□□ -0.35
TNIK-201ENST00000284483 FAM50AQ14320 339 aaKnown RBP12.84□□□□□ -0.35
TNIK-201ENST00000284483 HNRNPUQ00839 825 aaKnown RBP eCLIP12.78□□□□□ -0.36
TNIK-201ENST00000284483 HIRIP3Q9BW71 556 aaPredicted RBP12.78□□□□□ -0.36
TNIK-201ENST00000284483 ANP32AP39687 249 aaKnown RBP12.77□□□□□ -0.37
TNIK-201ENST00000284483 KCNH8Q96L42 1107 aa12.72□□□□□ -0.37
TNIK-201ENST00000284483 TIMELESSQ9UNS1 1208 aa12.7□□□□□ -0.38
TNIK-201ENST00000284483 ZMYND15Q9H091 742 aa12.68□□□□□ -0.38
TNIK-201ENST00000284483 PAK3O75914 559 aaPredicted RBP12.66□□□□□ -0.38
TNIK-201ENST00000284483 FAM9BQ8IZU0 186 aa12.66□□□□□ -0.38
TNIK-201ENST00000284483 NOP58Q9Y2X3 529 aaKnown RBP12.66□□□□□ -0.38
TNIK-201ENST00000284483 ZNF326Q5BKZ1 582 aaKnown RBP12.64□□□□□ -0.39
TNIK-201ENST00000284483 SENP3-EIF4A1A0A087X0R7 540 aa12.63□□□□□ -0.39
TNIK-201ENST00000284483 VSIG10Q8N0Z9 540 aa12.63□□□□□ -0.39
TNIK-201ENST00000284483 ZBTB47Q9UFB7 747 aaPredicted RBP12.63□□□□□ -0.39
TNIK-201ENST00000284483 ARXQ96QS3 562 aa12.6□□□□□ -0.39
TNIK-201ENST00000284483 GLIPR1L2Q4G1C9 344 aa12.58□□□□□ -0.4
TNIK-201ENST00000284483 A0A0U1RQG5 324 aaPredicted RBP12.56□□□□□ -0.4
TNIK-201ENST00000284483 P3H3Q8IVL6 736 aa12.53□□□□□ -0.4
TNIK-201ENST00000284483 BRPF3Q9ULD4 1205 aa12.53□□□□□ -0.4
TNIK-201ENST00000284483 RSPH6AQ9H0K4 717 aa12.49□□□□□ -0.41
TNIK-201ENST00000284483 C11orf95C9JLR9 678 aaPredicted RBP12.49□□□□□ -0.41
TNIK-201ENST00000284483 LAS1LQ9Y4W2 734 aaKnown RBP12.48□□□□□ -0.41
TNIK-201ENST00000284483 B4GALNT3Q6L9W6 998 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms