RNA–Protein interactions for RNA: ENST00000281455.6

ACSL1-201, Transcript of acyl-CoA synthetase long chain family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACSL1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL1-201ENST00000281455 NISCHQ9Y2I1 1504 aa28.25■■■□□ 2.11
ACSL1-201ENST00000281455 DCAF8L2P0C7V8 631 aa26.65■■□□□ 1.86
ACSL1-201ENST00000281455 SHROOM4Q9ULL8 1493 aa25.95■■□□□ 1.74
ACSL1-201ENST00000281455 SUPT5HO00267 1087 aaKnown RBP25.65■■□□□ 1.7
ACSL1-201ENST00000281455 EHMT2Q96KQ7 1210 aa24.48■■□□□ 1.51
ACSL1-201ENST00000281455 FAM9AQ8IZU1 332 aaPredicted RBP24.05■■□□□ 1.44
ACSL1-201ENST00000281455 ABCC9O60706 1549 aa23.88■■□□□ 1.41
ACSL1-201ENST00000281455 CHIC1Q5VXU3 224 aa23.61■■□□□ 1.37
ACSL1-201ENST00000281455 TRIM41Q8WV44 630 aa23.56■■□□□ 1.36
ACSL1-201ENST00000281455 ZCCHC6Q5VYS8 1495 aaKnown RBP23.56■■□□□ 1.36
ACSL1-201ENST00000281455 PCGF6Q9BYE7 350 aa23.55■■□□□ 1.36
ACSL1-201ENST00000281455 LOC105371045A0A1W2PR82 267 aa23.52■■□□□ 1.36
ACSL1-201ENST00000281455 TTBK1Q5TCY1 1321 aaPredicted RBP23.49■■□□□ 1.35
ACSL1-201ENST00000281455 PABPN1Q86U42 306 aaKnown RBP eCLIP23.42■■□□□ 1.34
ACSL1-201ENST00000281455 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
ACSL1-201ENST00000281455 RANGAP1P46060 587 aaPredicted RBP23.29■■□□□ 1.32
ACSL1-201ENST00000281455 PPARGC1BQ86YN6 1023 aaKnown RBP23.27■■□□□ 1.32
ACSL1-201ENST00000281455 SCRIBQ14160 1630 aa23.13■■□□□ 1.29
ACSL1-201ENST00000281455 UBTFP17480 764 aaKnown RBP22.92■■□□□ 1.26
ACSL1-201ENST00000281455 MYO15BQ96JP2 1530 aa22.68■■□□□ 1.22
ACSL1-201ENST00000281455 APLP2Q06481 763 aa22.65■■□□□ 1.22
ACSL1-201ENST00000281455 RSF1Q96T23 1441 aaPredicted RBP22.57■■□□□ 1.2
ACSL1-201ENST00000281455 TRIM26Q12899 539 aaPredicted RBP22.53■■□□□ 1.2
ACSL1-201ENST00000281455 ATP1B4Q9UN42 357 aaPredicted RBP22.51■■□□□ 1.19
ACSL1-201ENST00000281455 CECR2Q9BXF3 1484 aa22.5■■□□□ 1.19
ACSL1-201ENST00000281455 CCER1Q8TC90 406 aaPredicted RBP22.46■■□□□ 1.19
ACSL1-201ENST00000281455 HRCP23327 699 aa22.45■■□□□ 1.18
ACSL1-201ENST00000281455 DCAF1Q9Y4B6 1507 aa22.38■■□□□ 1.17
ACSL1-201ENST00000281455 NACADO15069 1562 aa22.26■■□□□ 1.15
ACSL1-201ENST00000281455 RB1CC1Q8TDY2 1594 aa22.25■■□□□ 1.15
ACSL1-201ENST00000281455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.25■■□□□ 1.15
ACSL1-201ENST00000281455 HNRNPUL2Q1KMD3 747 aaKnown RBP22.23■■□□□ 1.15
ACSL1-201ENST00000281455 ITGAEP38570 1179 aa22.19■■□□□ 1.14
ACSL1-201ENST00000281455 MROH2BQ7Z745 1585 aa22.14■■□□□ 1.14
ACSL1-201ENST00000281455 CSRNP3Q8WYN3 585 aa22.1■■□□□ 1.13
ACSL1-201ENST00000281455 ZEB1P37275 1124 aaPredicted RBP22■■□□□ 1.11
ACSL1-201ENST00000281455 P3H3Q8IVL6 736 aa21.89■■□□□ 1.1
ACSL1-201ENST00000281455 WIZO95785 1651 aa21.88■■□□□ 1.09
ACSL1-201ENST00000281455 BAZ1AQ9NRL2 1556 aaPredicted RBP21.83■■□□□ 1.09
ACSL1-201ENST00000281455 YTHDC1Q96MU7 727 aaKnown RBP21.77■■□□□ 1.08
ACSL1-201ENST00000281455 ABCC8Q09428 1581 aa21.75■■□□□ 1.07
ACSL1-201ENST00000281455 CCDC88BA6NC98 1476 aa21.72■■□□□ 1.07
ACSL1-201ENST00000281455 SOGA1O94964 1423 aa21.7■■□□□ 1.06
ACSL1-201ENST00000281455 ARID3CA6NKF2 412 aa21.7■■□□□ 1.06
ACSL1-201ENST00000281455 BAZ1BQ9UIG0 1483 aaKnown RBP21.69■■□□□ 1.06
ACSL1-201ENST00000281455 WRNQ14191 1432 aaPredicted RBP eCLIP21.63■■□□□ 1.05
ACSL1-201ENST00000281455 FAM50AQ14320 339 aaKnown RBP21.61■■□□□ 1.05
ACSL1-201ENST00000281455 FBLN2P98095 1184 aa21.56■■□□□ 1.04
ACSL1-201ENST00000281455 CEP162Q5TB80 1403 aa21.51■■□□□ 1.03
ACSL1-201ENST00000281455 RUSC2Q8N2Y8 1516 aa21.43■■□□□ 1.02
ACSL1-201ENST00000281455 SMARCA4P51532 1647 aa21.42■■□□□ 1.02
ACSL1-201ENST00000281455 CLIP1P30622 1438 aa21.4■■□□□ 1.02
ACSL1-201ENST00000281455 DIEXFQ68CQ4 756 aaKnown RBP21.4■■□□□ 1.02
ACSL1-201ENST00000281455 NEUROD1Q13562 356 aa21.39■■□□□ 1.01
ACSL1-201ENST00000281455 TOP2AP11388 1531 aaKnown RBP21.38■■□□□ 1.01
ACSL1-201ENST00000281455 ATAD2BQ9ULI0 1458 aa21.34■■□□□ 1.01
ACSL1-201ENST00000281455 CNGB1Q14028 1251 aaPredicted RBP21.31■■□□□ 1
ACSL1-201ENST00000281455 CENPBP07199 599 aaPredicted RBP21.3■■□□□ 1
ACSL1-201ENST00000281455 GOLGA3Q08378 1498 aa21.29■■□□□ 1
ACSL1-201ENST00000281455 TNIKQ9UKE5 1360 aa21.27■■□□□ 1
ACSL1-201ENST00000281455 SMARCA2P51531 1590 aa21.2■□□□□ 0.98
ACSL1-201ENST00000281455 EEA1Q15075 1411 aa21.18■□□□□ 0.98
ACSL1-201ENST00000281455 TRIM52Q96A61 297 aa21.16■□□□□ 0.98
ACSL1-201ENST00000281455 POLR3GLQ9BT43 218 aa21.15■□□□□ 0.98
ACSL1-201ENST00000281455 CEP164Q9UPV0 1460 aa21.14■□□□□ 0.98
ACSL1-201ENST00000281455 KIF27Q86VH2 1401 aa21.13■□□□□ 0.97
ACSL1-201ENST00000281455 CUX2O14529 1486 aa21.09■□□□□ 0.97
ACSL1-201ENST00000281455 KANK4Q5T7N3 995 aaPredicted RBP21.08■□□□□ 0.97
ACSL1-201ENST00000281455 CHIC2Q9UKJ5 165 aa21.07■□□□□ 0.96
ACSL1-201ENST00000281455 ZNF316A6NFI3 1004 aaPredicted RBP21.07■□□□□ 0.96
ACSL1-201ENST00000281455 MYT1LQ9UL68 1186 aa21.06■□□□□ 0.96
ACSL1-201ENST00000281455 ZNF777Q9ULD5 760 aaPredicted RBP21.05■□□□□ 0.96
ACSL1-201ENST00000281455 RAPGEF2Q9Y4G8 1499 aa21.05■□□□□ 0.96
ACSL1-201ENST00000281455 BICRAQ9NZM4 1560 aa21.02■□□□□ 0.96
ACSL1-201ENST00000281455 DNAJC5BQ9UF47 199 aa21.01■□□□□ 0.95
ACSL1-201ENST00000281455 TDRD9Q8NDG6 1382 aaKnown RBP21■□□□□ 0.95
ACSL1-201ENST00000281455 HIRIP3Q9BW71 556 aaPredicted RBP20.98■□□□□ 0.95
ACSL1-201ENST00000281455 CARMIL1Q5VZK9 1371 aa20.97■□□□□ 0.95
ACSL1-201ENST00000281455 ZNF326Q5BKZ1 582 aaKnown RBP20.94■□□□□ 0.94
ACSL1-201ENST00000281455 CADPSQ9ULU8 1353 aa20.94■□□□□ 0.94
ACSL1-201ENST00000281455 EIF4G1Q04637 1599 aaKnown RBP20.9■□□□□ 0.94
ACSL1-201ENST00000281455 CHMP7Q8WUX9 453 aaPredicted RBP20.89■□□□□ 0.93
ACSL1-201ENST00000281455 MTUS2Q5JR59 1369 aa20.87■□□□□ 0.93
ACSL1-201ENST00000281455 VPS8Q8N3P4 1428 aa20.85■□□□□ 0.93
ACSL1-201ENST00000281455 UNC13AQ9UPW8 1703 aa20.84■□□□□ 0.93
ACSL1-201ENST00000281455 RRP7BPQ9NSQ0 103 aa20.84■□□□□ 0.93
ACSL1-201ENST00000281455 GTF3C3Q9Y5Q9 886 aa20.83■□□□□ 0.92
ACSL1-201ENST00000281455 SYNJ1O43426 1573 aa20.82■□□□□ 0.92
ACSL1-201ENST00000281455 PELP1Q8IZL8 1130 aaKnown RBP20.78■□□□□ 0.92
ACSL1-201ENST00000281455 NCAPD3P42695 1498 aa20.77■□□□□ 0.92
ACSL1-201ENST00000281455 MIER1Q8N108 512 aa20.77■□□□□ 0.92
ACSL1-201ENST00000281455 SIN3AQ96ST3 1273 aa20.77■□□□□ 0.92
ACSL1-201ENST00000281455 NESP48681 1621 aa20.74■□□□□ 0.91
ACSL1-201ENST00000281455 DDX10Q13206 875 aaKnown RBP20.73■□□□□ 0.91
ACSL1-201ENST00000281455 RAD54L2Q9Y4B4 1467 aa20.72■□□□□ 0.91
ACSL1-201ENST00000281455 FANCD2Q9BXW9 1451 aa20.71■□□□□ 0.91
ACSL1-201ENST00000281455 ERCC6Q03468 1493 aa20.67■□□□□ 0.9
ACSL1-201ENST00000281455 FHOD3Q2V2M9 1422 aa20.67■□□□□ 0.9
ACSL1-201ENST00000281455 IGF1RP08069 1367 aa20.66■□□□□ 0.9
ACSL1-201ENST00000281455 CDK11AQ9UQ88 783 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms