RNA–Protein interactions for RNA: ENST00000278616.8

ATM-201, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ATM, Length 13,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-201ENST00000278616 DCAF8L2P0C7V8 631 aa12.46□□□□□ -0.42
ATM-201ENST00000278616 PELP1Q8IZL8 1130 aaKnown RBP12.36□□□□□ -0.43
ATM-201ENST00000278616 EHMT2Q96KQ7 1210 aa12.06□□□□□ -0.48
ATM-201ENST00000278616 SUPT5HO00267 1087 aaKnown RBP11.88□□□□□ -0.51
ATM-201ENST00000278616 ERICH6Q7L0X2 663 aa11.82□□□□□ -0.52
ATM-201ENST00000278616 MYT1Q01538 1121 aa11.77□□□□□ -0.52
ATM-201ENST00000278616 CCER1Q8TC90 406 aaPredicted RBP11.77□□□□□ -0.53
ATM-201ENST00000278616 SHROOM4Q9ULL8 1493 aa11.69□□□□□ -0.54
ATM-201ENST00000278616 TTBK1Q5TCY1 1321 aaPredicted RBP11.62□□□□□ -0.55
ATM-201ENST00000278616 CENPBP07199 599 aaPredicted RBP11.58□□□□□ -0.56
ATM-201ENST00000278616 APLP2Q06481 763 aa11.53□□□□□ -0.56
ATM-201ENST00000278616 NEFLP07196 543 aa11.37□□□□□ -0.59
ATM-201ENST00000278616 FAM9AQ8IZU1 332 aaPredicted RBP11.36□□□□□ -0.59
ATM-201ENST00000278616 PCGF6Q9BYE7 350 aa11.32□□□□□ -0.6
ATM-201ENST00000278616 YTHDC1Q96MU7 727 aaKnown RBP11.32□□□□□ -0.6
ATM-201ENST00000278616 ZEB1P37275 1124 aaPredicted RBP11.31□□□□□ -0.6
ATM-201ENST00000278616 RANGAP1P46060 587 aaPredicted RBP11.31□□□□□ -0.6
ATM-201ENST00000278616 DAXXQ9UER7 740 aaPredicted RBP11.23□□□□□ -0.61
ATM-201ENST00000278616 PPARGC1BQ86YN6 1023 aaKnown RBP11.09□□□□□ -0.63
ATM-201ENST00000278616 ATP1B4Q9UN42 357 aaPredicted RBP11.08□□□□□ -0.64
ATM-201ENST00000278616 RTL5Q5HYW3 569 aaPredicted RBP10.95□□□□□ -0.66
ATM-201ENST00000278616 NISCHQ9Y2I1 1504 aa10.95□□□□□ -0.66
ATM-201ENST00000278616 ZNF316A6NFI3 1004 aaPredicted RBP10.93□□□□□ -0.66
ATM-201ENST00000278616 CNGB1Q14028 1251 aaPredicted RBP10.92□□□□□ -0.66
ATM-201ENST00000278616 POLR3GLQ9BT43 218 aa10.82□□□□□ -0.68
ATM-201ENST00000278616 TRIM41Q8WV44 630 aa10.81□□□□□ -0.68
ATM-201ENST00000278616 UBTFP17480 764 aaKnown RBP10.8□□□□□ -0.68
ATM-201ENST00000278616 CLSPNQ9HAW4 1339 aa10.79□□□□□ -0.68
ATM-201ENST00000278616 ITGAEP38570 1179 aa10.73□□□□□ -0.69
ATM-201ENST00000278616 TRIM26Q12899 539 aaPredicted RBP10.71□□□□□ -0.69
ATM-201ENST00000278616 HRCP23327 699 aa10.7□□□□□ -0.7
ATM-201ENST00000278616 CHIC1Q5VXU3 224 aa10.69□□□□□ -0.7
ATM-201ENST00000278616 GLIPR1L2Q4G1C9 344 aa10.62□□□□□ -0.71
ATM-201ENST00000278616 LOC105371045A0A1W2PR82 267 aa10.58□□□□□ -0.72
ATM-201ENST00000278616 HNRNPUL2Q1KMD3 747 aaKnown RBP10.58□□□□□ -0.72
ATM-201ENST00000278616 SLC4A1APQ9BWU0 796 aaKnown RBP10.58□□□□□ -0.72
ATM-201ENST00000278616 MYT1LQ9UL68 1186 aa10.57□□□□□ -0.72
ATM-201ENST00000278616 DIEXFQ68CQ4 756 aaKnown RBP10.57□□□□□ -0.72
ATM-201ENST00000278616 CDK11AQ9UQ88 783 aaPredicted RBP10.56□□□□□ -0.72
ATM-201ENST00000278616 BCANQ96GW7 911 aa10.54□□□□□ -0.72
ATM-201ENST00000278616 ZBTB47Q9UFB7 747 aaPredicted RBP10.53□□□□□ -0.72
ATM-201ENST00000278616 EIF5BO60841 1220 aaKnown RBP10.52□□□□□ -0.73
ATM-201ENST00000278616 BCL11AQ9H165 835 aa10.5□□□□□ -0.73
ATM-201ENST00000278616 ANP32BQ92688 251 aaKnown RBP10.48□□□□□ -0.73
ATM-201ENST00000278616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.47□□□□□ -0.73
ATM-201ENST00000278616 ANP32AP39687 249 aaKnown RBP10.46□□□□□ -0.73
ATM-201ENST00000278616 GTF3C3Q9Y5Q9 886 aa10.44□□□□□ -0.74
ATM-201ENST00000278616 CANXP27824 592 aaKnown RBP10.38□□□□□ -0.75
ATM-201ENST00000278616 ANP32CO43423 234 aa10.34□□□□□ -0.75
ATM-201ENST00000278616 NEUROD1Q13562 356 aa10.34□□□□□ -0.75
ATM-201ENST00000278616 HSP90AA1P07900 732 aaKnown RBP10.32□□□□□ -0.76
ATM-201ENST00000278616 SLC24A1O60721 1099 aa10.31□□□□□ -0.76
ATM-201ENST00000278616 FAM50AQ14320 339 aaKnown RBP10.28□□□□□ -0.76
ATM-201ENST00000278616 NPM2Q86SE8 214 aaKnown RBP10.27□□□□□ -0.76
ATM-201ENST00000278616 UPF2Q9HAU5 1272 aaKnown RBP10.27□□□□□ -0.77
ATM-201ENST00000278616 NEFMP07197 916 aa10.25□□□□□ -0.77
ATM-201ENST00000278616 ZNF326Q5BKZ1 582 aaKnown RBP10.25□□□□□ -0.77
ATM-201ENST00000278616 TRIM52Q96A61 297 aa10.22□□□□□ -0.77
ATM-201ENST00000278616 TNNT2P45379 298 aaPredicted RBP10.2□□□□□ -0.78
ATM-201ENST00000278616 ACIN1Q9UKV3 1341 aaKnown RBP10.17□□□□□ -0.78
ATM-201ENST00000278616 NBR1Q14596 966 aa10.17□□□□□ -0.78
ATM-201ENST00000278616 CDK11BP21127 795 aaKnown RBP10.15□□□□□ -0.78
ATM-201ENST00000278616 ARXQ96QS3 562 aa10.14□□□□□ -0.79
ATM-201ENST00000278616 ARID3CA6NKF2 412 aa10.1□□□□□ -0.79
ATM-201ENST00000278616 TRIM44Q96DX7 344 aaPredicted RBP10.1□□□□□ -0.79
ATM-201ENST00000278616 FKBP8Q14318 412 aa10.1□□□□□ -0.79
ATM-201ENST00000278616 SALL2Q9Y467 1007 aaPredicted RBP10.04□□□□□ -0.8
ATM-201ENST00000278616 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.02□□□□□ -0.81
ATM-201ENST00000278616 ANP32EQ9BTT0 268 aa10.02□□□□□ -0.81
ATM-201ENST00000278616 CCDC136Q96JN2 1154 aa10□□□□□ -0.81
ATM-201ENST00000278616 PLPPR3Q6T4P5 718 aa10□□□□□ -0.81
ATM-201ENST00000278616 P3H3Q8IVL6 736 aa10□□□□□ -0.81
ATM-201ENST00000278616 HNRNPUQ00839 825 aaKnown RBP eCLIP9.98□□□□□ -0.81
ATM-201ENST00000278616 IRX6P78412 446 aaPredicted RBP9.98□□□□□ -0.81
ATM-201ENST00000278616 BECN1Q14457 450 aa9.98□□□□□ -0.81
ATM-201ENST00000278616 NCLP19338 710 aaKnown RBP9.98□□□□□ -0.81
ATM-201ENST00000278616 DNTTIP2Q5QJE6 756 aaKnown RBP9.97□□□□□ -0.81
ATM-201ENST00000278616 DDRGK1Q96HY6 314 aa9.96□□□□□ -0.82
ATM-201ENST00000278616 SENP3-EIF4A1A0A087X0R7 540 aa9.96□□□□□ -0.82
ATM-201ENST00000278616 GOLGA6L22H0YM25 854 aa9.95□□□□□ -0.82
ATM-201ENST00000278616 SENP3Q9H4L4 574 aaPredicted RBP9.95□□□□□ -0.82
ATM-201ENST00000278616 ERICH6BQ5W0A0 696 aa9.95□□□□□ -0.82
ATM-201ENST00000278616 ZRSR1Q15695 479 aaKnown RBP9.94□□□□□ -0.82
ATM-201ENST00000278616 MYH16Q9H6N6 1097 aa9.94□□□□□ -0.82
ATM-201ENST00000278616 FBLN2P98095 1184 aa9.94□□□□□ -0.82
ATM-201ENST00000278616 PTMAP06454 111 aaKnown RBP9.93□□□□□ -0.82
ATM-201ENST00000278616 FAM9BQ8IZU0 186 aa9.92□□□□□ -0.82
ATM-201ENST00000278616 NAP1L5Q96NT1 182 aaPredicted RBP9.91□□□□□ -0.82
ATM-201ENST00000278616 TONSLQ96HA7 1378 aa9.9□□□□□ -0.82
ATM-201ENST00000278616 PABPN1Q86U42 306 aaKnown RBP eCLIP9.9□□□□□ -0.82
ATM-201ENST00000278616 TMC1Q8TDI8 760 aa9.89□□□□□ -0.83
ATM-201ENST00000278616 PLEKHG5O94827 1062 aa9.87□□□□□ -0.83
ATM-201ENST00000278616 ZNF777Q9ULD5 760 aaPredicted RBP9.87□□□□□ -0.83
ATM-201ENST00000278616 WDR43Q15061 677 aaKnown RBP eCLIP9.86□□□□□ -0.83
ATM-201ENST00000278616 HIRIP3Q9BW71 556 aaPredicted RBP9.86□□□□□ -0.83
ATM-201ENST00000278616 DDX10Q13206 875 aaKnown RBP9.86□□□□□ -0.83
ATM-201ENST00000278616 TPRNQ4KMQ1 711 aa9.85□□□□□ -0.83
ATM-201ENST00000278616 GOLGA6L6A8MZA4 724 aa9.85□□□□□ -0.83
ATM-201ENST00000278616 SCAF1Q9H7N4 1312 aaKnown RBP9.84□□□□□ -0.83
ATM-201ENST00000278616 CASC1Q6TDU7 716 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms