RNA–Protein interactions for RNA: ENST00000276127.8

CPXCR1-201, Transcript of CPX chromosome region, candidate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPXCR1, Length 1,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPXCR1-201ENST00000276127 AEBP2Q6ZN18 517 aaPredicted RBP29.71■■■□□ 2.35
CPXCR1-201ENST00000276127 CHIC1Q5VXU3 224 aa27.96■■■□□ 2.07
CPXCR1-201ENST00000276127 SENP3Q9H4L4 574 aaPredicted RBP25.73■■□□□ 1.71
CPXCR1-201ENST00000276127 PHF23Q9BUL5 403 aaPredicted RBP25.14■■□□□ 1.61
CPXCR1-201ENST00000276127 POTEDQ86YR6 584 aa24.4■■□□□ 1.5
CPXCR1-201ENST00000276127 FOXD1Q16676 465 aa23.99■■□□□ 1.43
CPXCR1-201ENST00000276127 MSH5O43196 834 aa23.08■■□□□ 1.28
CPXCR1-201ENST00000276127 PIAS4Q8N2W9 510 aaPredicted RBP22.2■■□□□ 1.15
CPXCR1-201ENST00000276127 PPP6R1Q9UPN7 881 aa21.45■■□□□ 1.02
CPXCR1-201ENST00000276127 ADRA2BP18089 450 aa21.35■■□□□ 1.01
CPXCR1-201ENST00000276127 PLPPR3Q6T4P5 718 aa21.26■□□□□ 0.99
CPXCR1-201ENST00000276127 CACNB1Q02641 598 aaPredicted RBP20.49■□□□□ 0.87
CPXCR1-201ENST00000276127 DMRT2Q9Y5R5 561 aa20.17■□□□□ 0.82
CPXCR1-201ENST00000276127 MAPK8IP2Q13387 824 aaPredicted RBP19.94■□□□□ 0.78
CPXCR1-201ENST00000276127 SCAF1Q9H7N4 1312 aaKnown RBP19.77■□□□□ 0.75
CPXCR1-201ENST00000276127 RNF39Q9H2S5 420 aa19.47■□□□□ 0.71
CPXCR1-201ENST00000276127 DCAF8L1A6NGE4 600 aa19.43■□□□□ 0.7
CPXCR1-201ENST00000276127 C1QBPQ07021 282 aaKnown RBP19.21■□□□□ 0.67
CPXCR1-201ENST00000276127 HOXD11P31277 338 aaPredicted RBP18.96■□□□□ 0.63
CPXCR1-201ENST00000276127 POTEHQ6S545 545 aa18.92■□□□□ 0.62
CPXCR1-201ENST00000276127 DNAJC5BQ9UF47 199 aa18.63■□□□□ 0.57
CPXCR1-201ENST00000276127 RNF216Q9NWF9 866 aaPredicted RBP18.52■□□□□ 0.56
CPXCR1-201ENST00000276127 PPP4R3CPQ6ZMV5 832 aa18.43■□□□□ 0.54
CPXCR1-201ENST00000276127 CNKSR2Q8WXI2 1034 aa18.4■□□□□ 0.54
CPXCR1-201ENST00000276127 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.11■□□□□ 0.49
CPXCR1-201ENST00000276127 DSG3P32926 999 aa17.83■□□□□ 0.44
CPXCR1-201ENST00000276127 NCBP3Q53F19 620 aaKnown RBP17.72■□□□□ 0.43
CPXCR1-201ENST00000276127 CAPN15O75808 1086 aa17.71■□□□□ 0.43
CPXCR1-201ENST00000276127 SPINK5Q9NQ38 1064 aaPredicted RBP17.57■□□□□ 0.4
CPXCR1-201ENST00000276127 U3KPZ7 1027 aaPredicted RBP17.5■□□□□ 0.39
CPXCR1-201ENST00000276127 NPM3O75607 178 aaKnown RBP17.35■□□□□ 0.37
CPXCR1-201ENST00000276127 SP7Q8TDD2 431 aaPredicted RBP17.21■□□□□ 0.35
CPXCR1-201ENST00000276127 RBM42Q9BTD8 480 aaKnown RBP17.2■□□□□ 0.34
CPXCR1-201ENST00000276127 CHRDL2Q6WN34 429 aa17.18■□□□□ 0.34
CPXCR1-201ENST00000276127 APLP2Q06481 763 aa17.14■□□□□ 0.33
CPXCR1-201ENST00000276127 ABCB7O75027 752 aa17.12■□□□□ 0.33
CPXCR1-201ENST00000276127 TRHP20396 242 aaPredicted RBP17.12■□□□□ 0.33
CPXCR1-201ENST00000276127 ZNF219Q9P2Y4 722 aaPredicted RBP17.12■□□□□ 0.33
CPXCR1-201ENST00000276127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.78■□□□□ 0.28
CPXCR1-201ENST00000276127 HNRNPUL2Q1KMD3 747 aaKnown RBP16.78■□□□□ 0.28
CPXCR1-201ENST00000276127 KCNA4P22459 653 aa16.69■□□□□ 0.26
CPXCR1-201ENST00000276127 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
CPXCR1-201ENST00000276127 SAMD1Q6SPF0 538 aaPredicted RBP16.59■□□□□ 0.25
CPXCR1-201ENST00000276127 HAX1O00165 279 aa16.56■□□□□ 0.24
CPXCR1-201ENST00000276127 AKT1S1Q96B36 256 aa16.49■□□□□ 0.23
CPXCR1-201ENST00000276127 PIP4P2Q8N4L2 257 aa16.48■□□□□ 0.23
CPXCR1-201ENST00000276127 POLA2Q14181 598 aa16.37■□□□□ 0.21
CPXCR1-201ENST00000276127 REM2Q8IYK8 340 aaPredicted RBP16.27■□□□□ 0.2
CPXCR1-201ENST00000276127 FXR2P51116 673 aaKnown RBP eCLIP16.22■□□□□ 0.19
CPXCR1-201ENST00000276127 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
CPXCR1-201ENST00000276127 LHX8Q68G74 356 aa16.12■□□□□ 0.17
CPXCR1-201ENST00000276127 EVX2Q03828 476 aa16.11■□□□□ 0.17
CPXCR1-201ENST00000276127 PLSCR2Q9NRY7 297 aa16.1■□□□□ 0.17
CPXCR1-201ENST00000276127 PITPNM1O00562 1244 aa16.09■□□□□ 0.17
CPXCR1-201ENST00000276127 ZBTB12Q9Y330 459 aaPredicted RBP16.09■□□□□ 0.17
CPXCR1-201ENST00000276127 OSCARQ8IYS5 282 aa15.87■□□□□ 0.13
CPXCR1-201ENST00000276127 GABBR2O75899 941 aa15.79■□□□□ 0.12
CPXCR1-201ENST00000276127 FOXD4L1Q9NU39 408 aa15.76■□□□□ 0.11
CPXCR1-201ENST00000276127 C19orf67A6NJJ6 358 aa15.75■□□□□ 0.11
CPXCR1-201ENST00000276127 SLC4A1APQ9BWU0 796 aaKnown RBP15.74■□□□□ 0.11
CPXCR1-201ENST00000276127 PRKAR2AP13861 404 aaKnown RBP15.7■□□□□ 0.1
CPXCR1-201ENST00000276127 ATF5Q9Y2D1 282 aaPredicted RBP15.64■□□□□ 0.09
CPXCR1-201ENST00000276127 SPDYE1Q8NFV5 336 aaPredicted RBP15.47■□□□□ 0.07
CPXCR1-201ENST00000276127 CLEC11AQ9Y240 323 aa15.45■□□□□ 0.06
CPXCR1-201ENST00000276127 SPDYE2BA6NHP3 402 aa15.43■□□□□ 0.06
CPXCR1-201ENST00000276127 SPDYE6P0CI01 402 aa15.43■□□□□ 0.06
CPXCR1-201ENST00000276127 SPDYE2Q495Y8 402 aa15.43■□□□□ 0.06
CPXCR1-201ENST00000276127 ATXN8OSP0DMR3 200 aa15.4■□□□□ 0.06
CPXCR1-201ENST00000276127 POTEIP0CG38 1075 aa15.37■□□□□ 0.05
CPXCR1-201ENST00000276127 CLCN6P51797 869 aa15.32■□□□□ 0.04
CPXCR1-201ENST00000276127 ZBTB22O15209 634 aa15.29■□□□□ 0.04
CPXCR1-201ENST00000276127 POTEMA6NI47 508 aa15.23■□□□□ 0.03
CPXCR1-201ENST00000276127 DCBLD2Q96PD2 775 aa15.21■□□□□ 0.02
CPXCR1-201ENST00000276127 FBLN2P98095 1184 aa15.2■□□□□ 0.02
CPXCR1-201ENST00000276127 CHADLQ6NUI6 762 aa15.2■□□□□ 0.02
CPXCR1-201ENST00000276127 PCDH10Q9P2E7 1040 aa15.18■□□□□ 0.02
CPXCR1-201ENST00000276127 CD44P16070 742 aaKnown RBP15.14■□□□□ 0.01
CPXCR1-201ENST00000276127 POTEGQ6S5H5 508 aa15.14■□□□□ 0.01
CPXCR1-201ENST00000276127 OTUD5Q96G74 571 aa15.06■□□□□ 0
CPXCR1-201ENST00000276127 PRR29P0C7W0 189 aa15.06■□□□□ 0
CPXCR1-201ENST00000276127 ZNF692Q9BU19 519 aaPredicted RBP15.03■□□□□ -0
CPXCR1-201ENST00000276127 SSUH2Q9Y2M2 353 aa15.03■□□□□ -0
CPXCR1-201ENST00000276127 MKRN4PQ13434 485 aaPredicted RBP14.93□□□□□ -0.02
CPXCR1-201ENST00000276127 FARP1Q9Y4F1 1045 aaPredicted RBP14.92□□□□□ -0.02
CPXCR1-201ENST00000276127 ZNF579Q8NAF0 562 aaKnown RBP14.86□□□□□ -0.03
CPXCR1-201ENST00000276127 POTEB2H3BUK9 544 aa14.81□□□□□ -0.04
CPXCR1-201ENST00000276127 ZRANB1Q9UGI0 708 aa14.75□□□□□ -0.05
CPXCR1-201ENST00000276127 PABPN1Q86U42 306 aaKnown RBP eCLIP14.74□□□□□ -0.05
CPXCR1-201ENST00000276127 GALR2O43603 387 aaPredicted RBP14.7□□□□□ -0.06
CPXCR1-201ENST00000276127 MAMSTRQ6ZN01 415 aa14.63□□□□□ -0.07
CPXCR1-201ENST00000276127 FAM163AQ96GL9 167 aaPredicted RBP14.56□□□□□ -0.08
CPXCR1-201ENST00000276127 LCE2DQ5TA82 110 aaPredicted RBP14.52□□□□□ -0.09
CPXCR1-201ENST00000276127 PAK3O75914 559 aaPredicted RBP14.49□□□□□ -0.09
CPXCR1-201ENST00000276127 PELP1Q8IZL8 1130 aaKnown RBP14.48□□□□□ -0.09
CPXCR1-201ENST00000276127 METRNQ9UJH8 293 aa14.48□□□□□ -0.09
CPXCR1-201ENST00000276127 SLC39A7Q92504 469 aa14.46□□□□□ -0.09
CPXCR1-201ENST00000276127 C7P10643 843 aa14.45□□□□□ -0.1
CPXCR1-201ENST00000276127 SCUBE2Q9NQ36 999 aa14.44□□□□□ -0.1
CPXCR1-201ENST00000276127 POTEJP0CG39 1038 aa14.39□□□□□ -0.11
CPXCR1-201ENST00000276127 EHMT2Q96KQ7 1210 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms