RNA–Protein interactions for RNA: ENST00000272198.10

PPFIA4-201, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 5,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-201ENST00000272198 NISCHQ9Y2I1 1504 aa24.29■■□□□ 1.48
PPFIA4-201ENST00000272198 DCAF8L2P0C7V8 631 aa23.37■■□□□ 1.33
PPFIA4-201ENST00000272198 SUPT5HO00267 1087 aaKnown RBP21.86■■□□□ 1.09
PPFIA4-201ENST00000272198 SHROOM4Q9ULL8 1493 aa21.82■■□□□ 1.08
PPFIA4-201ENST00000272198 FAM9AQ8IZU1 332 aaPredicted RBP20.88■□□□□ 0.93
PPFIA4-201ENST00000272198 ABCC9O60706 1549 aa20.75■□□□□ 0.91
PPFIA4-201ENST00000272198 APLP2Q06481 763 aa20.73■□□□□ 0.91
PPFIA4-201ENST00000272198 TRIM41Q8WV44 630 aa20.57■□□□□ 0.88
PPFIA4-201ENST00000272198 CCDC180Q9P1Z9 1646 aa20.55■□□□□ 0.88
PPFIA4-201ENST00000272198 EHMT2Q96KQ7 1210 aa20.5■□□□□ 0.87
PPFIA4-201ENST00000272198 PABPN1Q86U42 306 aaKnown RBP eCLIP20.17■□□□□ 0.82
PPFIA4-201ENST00000272198 UBTFP17480 764 aaKnown RBP20.17■□□□□ 0.82
PPFIA4-201ENST00000272198 ZCCHC6Q5VYS8 1495 aaKnown RBP20.16■□□□□ 0.82
PPFIA4-201ENST00000272198 RANGAP1P46060 587 aaPredicted RBP19.97■□□□□ 0.79
PPFIA4-201ENST00000272198 ATP1B4Q9UN42 357 aaPredicted RBP19.96■□□□□ 0.79
PPFIA4-201ENST00000272198 RB1CC1Q8TDY2 1594 aa19.92■□□□□ 0.78
PPFIA4-201ENST00000272198 SCRIBQ14160 1630 aa19.84■□□□□ 0.77
PPFIA4-201ENST00000272198 NACADO15069 1562 aa19.83■□□□□ 0.76
PPFIA4-201ENST00000272198 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.76
PPFIA4-201ENST00000272198 TTBK1Q5TCY1 1321 aaPredicted RBP19.77■□□□□ 0.75
PPFIA4-201ENST00000272198 ZEB1P37275 1124 aaPredicted RBP19.74■□□□□ 0.75
PPFIA4-201ENST00000272198 PCGF6Q9BYE7 350 aa19.68■□□□□ 0.74
PPFIA4-201ENST00000272198 DCAF1Q9Y4B6 1507 aa19.62■□□□□ 0.73
PPFIA4-201ENST00000272198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.54■□□□□ 0.72
PPFIA4-201ENST00000272198 HNRNPUL2Q1KMD3 747 aaKnown RBP19.54■□□□□ 0.72
PPFIA4-201ENST00000272198 CCER1Q8TC90 406 aaPredicted RBP19.54■□□□□ 0.72
PPFIA4-201ENST00000272198 PELP1Q8IZL8 1130 aaKnown RBP19.43■□□□□ 0.7
PPFIA4-201ENST00000272198 TRIM26Q12899 539 aaPredicted RBP19.41■□□□□ 0.7
PPFIA4-201ENST00000272198 MYT1LQ9UL68 1186 aa19.32■□□□□ 0.68
PPFIA4-201ENST00000272198 LOC105371045A0A1W2PR82 267 aa19.3■□□□□ 0.68
PPFIA4-201ENST00000272198 MYO15BQ96JP2 1530 aa19.27■□□□□ 0.68
PPFIA4-201ENST00000272198 CSRNP3Q8WYN3 585 aa19.22■□□□□ 0.67
PPFIA4-201ENST00000272198 FBLN2P98095 1184 aa19.19■□□□□ 0.66
PPFIA4-201ENST00000272198 PPARGC1BQ86YN6 1023 aaKnown RBP19.17■□□□□ 0.66
PPFIA4-201ENST00000272198 BAZ1AQ9NRL2 1556 aaPredicted RBP19.16■□□□□ 0.66
PPFIA4-201ENST00000272198 BAZ1BQ9UIG0 1483 aaKnown RBP19.14■□□□□ 0.65
PPFIA4-201ENST00000272198 RSF1Q96T23 1441 aaPredicted RBP19.13■□□□□ 0.65
PPFIA4-201ENST00000272198 ITGAEP38570 1179 aa19.12■□□□□ 0.65
PPFIA4-201ENST00000272198 CENPBP07199 599 aaPredicted RBP19.02■□□□□ 0.64
PPFIA4-201ENST00000272198 CDK11AQ9UQ88 783 aaPredicted RBP19.01■□□□□ 0.63
PPFIA4-201ENST00000272198 FAM50AQ14320 339 aaKnown RBP18.97■□□□□ 0.63
PPFIA4-201ENST00000272198 EEA1Q15075 1411 aa18.94■□□□□ 0.62
PPFIA4-201ENST00000272198 SMARCA2P51531 1590 aa18.87■□□□□ 0.61
PPFIA4-201ENST00000272198 NPM1P06748 294 aaKnown RBP eCLIP18.81■□□□□ 0.6
PPFIA4-201ENST00000272198 WRNQ14191 1432 aaPredicted RBP eCLIP18.81■□□□□ 0.6
PPFIA4-201ENST00000272198 TRIM52Q96A61 297 aa18.8■□□□□ 0.6
PPFIA4-201ENST00000272198 CECR2Q9BXF3 1484 aa18.79■□□□□ 0.6
PPFIA4-201ENST00000272198 P3H3Q8IVL6 736 aa18.78■□□□□ 0.6
PPFIA4-201ENST00000272198 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
PPFIA4-201ENST00000272198 ERCC6Q03468 1493 aa18.74■□□□□ 0.59
PPFIA4-201ENST00000272198 KIF27Q86VH2 1401 aa18.72■□□□□ 0.59
PPFIA4-201ENST00000272198 HRCP23327 699 aa18.71■□□□□ 0.59
PPFIA4-201ENST00000272198 NEFLP07196 543 aa18.69■□□□□ 0.58
PPFIA4-201ENST00000272198 GOLGA3Q08378 1498 aa18.64■□□□□ 0.57
PPFIA4-201ENST00000272198 MROH2BQ7Z745 1585 aa18.63■□□□□ 0.57
PPFIA4-201ENST00000272198 PDS5BQ9NTI5 1447 aa18.62■□□□□ 0.57
PPFIA4-201ENST00000272198 POLR3GLQ9BT43 218 aa18.62■□□□□ 0.57
PPFIA4-201ENST00000272198 CLIP1P30622 1438 aa18.56■□□□□ 0.56
PPFIA4-201ENST00000272198 ARID3CA6NKF2 412 aa18.56■□□□□ 0.56
PPFIA4-201ENST00000272198 ZNF777Q9ULD5 760 aaPredicted RBP18.56■□□□□ 0.56
PPFIA4-201ENST00000272198 TOP2AP11388 1531 aaKnown RBP18.56■□□□□ 0.56
PPFIA4-201ENST00000272198 CEP164Q9UPV0 1460 aa18.56■□□□□ 0.56
PPFIA4-201ENST00000272198 ACIN1Q9UKV3 1341 aaKnown RBP18.51■□□□□ 0.55
PPFIA4-201ENST00000272198 CCDC88BA6NC98 1476 aa18.5■□□□□ 0.55
PPFIA4-201ENST00000272198 ESF1Q9H501 851 aaKnown RBP18.5■□□□□ 0.55
PPFIA4-201ENST00000272198 MTUS2Q5JR59 1369 aa18.5■□□□□ 0.55
PPFIA4-201ENST00000272198 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.55
PPFIA4-201ENST00000272198 NEUROD1Q13562 356 aa18.46■□□□□ 0.55
PPFIA4-201ENST00000272198 SMARCA4P51532 1647 aa18.45■□□□□ 0.54
PPFIA4-201ENST00000272198 TNIKQ9UKE5 1360 aa18.44■□□□□ 0.54
PPFIA4-201ENST00000272198 SLC4A1APQ9BWU0 796 aaKnown RBP18.43■□□□□ 0.54
PPFIA4-201ENST00000272198 CADPSQ9ULU8 1353 aa18.42■□□□□ 0.54
PPFIA4-201ENST00000272198 TSPY4P0CV99 314 aa18.41■□□□□ 0.54
PPFIA4-201ENST00000272198 TSPY10P0CW01 314 aa18.41■□□□□ 0.54
PPFIA4-201ENST00000272198 PLEKHD1A6NEE1 506 aa18.4■□□□□ 0.54
PPFIA4-201ENST00000272198 YTHDC1Q96MU7 727 aaKnown RBP18.4■□□□□ 0.54
PPFIA4-201ENST00000272198 CUX2O14529 1486 aa18.38■□□□□ 0.53
PPFIA4-201ENST00000272198 CEP162Q5TB80 1403 aa18.36■□□□□ 0.53
PPFIA4-201ENST00000272198 CARMIL1Q5VZK9 1371 aa18.34■□□□□ 0.53
PPFIA4-201ENST00000272198 WIZO95785 1651 aa18.33■□□□□ 0.53
PPFIA4-201ENST00000272198 ZNF326Q5BKZ1 582 aaKnown RBP18.33■□□□□ 0.52
PPFIA4-201ENST00000272198 ABCC8Q09428 1581 aa18.31■□□□□ 0.52
PPFIA4-201ENST00000272198 FHAD1B1AJZ9 1412 aa18.31■□□□□ 0.52
PPFIA4-201ENST00000272198 SOGA1O94964 1423 aa18.29■□□□□ 0.52
PPFIA4-201ENST00000272198 BCANQ96GW7 911 aa18.26■□□□□ 0.51
PPFIA4-201ENST00000272198 ERICH6Q7L0X2 663 aa18.26■□□□□ 0.51
PPFIA4-201ENST00000272198 DIEXFQ68CQ4 756 aaKnown RBP18.25■□□□□ 0.51
PPFIA4-201ENST00000272198 TONSLQ96HA7 1378 aa18.24■□□□□ 0.51
PPFIA4-201ENST00000272198 STAG3Q9UJ98 1225 aa18.23■□□□□ 0.51
PPFIA4-201ENST00000272198 NCAPD3P42695 1498 aa18.22■□□□□ 0.51
PPFIA4-201ENST00000272198 CARMIL2Q6F5E8 1435 aa18.21■□□□□ 0.51
PPFIA4-201ENST00000272198 ANP32CO43423 234 aa18.21■□□□□ 0.51
PPFIA4-201ENST00000272198 CNGB1Q14028 1251 aaPredicted RBP18.16■□□□□ 0.5
PPFIA4-201ENST00000272198 EIF4G1Q04637 1599 aaKnown RBP18.15■□□□□ 0.5
PPFIA4-201ENST00000272198 ZNF316A6NFI3 1004 aaPredicted RBP18.15■□□□□ 0.5
PPFIA4-201ENST00000272198 KCNH8Q96L42 1107 aa18.14■□□□□ 0.5
PPFIA4-201ENST00000272198 CFDP1Q9UEE9 299 aaPredicted RBP18.14■□□□□ 0.49
PPFIA4-201ENST00000272198 CHIC2Q9UKJ5 165 aa18.14■□□□□ 0.49
PPFIA4-201ENST00000272198 FANCD2Q9BXW9 1451 aa18.13■□□□□ 0.49
PPFIA4-201ENST00000272198 CHGAP10645 457 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms