RNA–Protein interactions for RNA: ENST00000271277.10

CTTNBP2NL-201, Transcript of CTTNBP2 N-terminal like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTTNBP2NL, Length 5,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2NL-201ENST00000271277 NISCHQ9Y2I1 1504 aa15.71■□□□□ 0.11
CTTNBP2NL-201ENST00000271277 CCDC180Q9P1Z9 1646 aa13.96□□□□□ -0.17
CTTNBP2NL-201ENST00000271277 ZCCHC6Q5VYS8 1495 aaKnown RBP13.44□□□□□ -0.26
CTTNBP2NL-201ENST00000271277 DCAF1Q9Y4B6 1507 aa13.31□□□□□ -0.28
CTTNBP2NL-201ENST00000271277 UNC13AQ9UPW8 1703 aa13.07□□□□□ -0.32
CTTNBP2NL-201ENST00000271277 MYO15BQ96JP2 1530 aa13.07□□□□□ -0.32
CTTNBP2NL-201ENST00000271277 EIF4G1Q04637 1599 aaKnown RBP12.75□□□□□ -0.37
CTTNBP2NL-201ENST00000271277 ABCC9O60706 1549 aa12.72□□□□□ -0.37
CTTNBP2NL-201ENST00000271277 BICRAQ9NZM4 1560 aa12.56□□□□□ -0.4
CTTNBP2NL-201ENST00000271277 NACADO15069 1562 aa12.48□□□□□ -0.41
CTTNBP2NL-201ENST00000271277 PEG3Q9GZU2 1588 aa12.37□□□□□ -0.43
CTTNBP2NL-201ENST00000271277 SCRIBQ14160 1630 aa12.3□□□□□ -0.44
CTTNBP2NL-201ENST00000271277 WIZO95785 1651 aa12.23□□□□□ -0.45
CTTNBP2NL-201ENST00000271277 BAZ1AQ9NRL2 1556 aaPredicted RBP12.22□□□□□ -0.45
CTTNBP2NL-201ENST00000271277 RB1CC1Q8TDY2 1594 aa12.22□□□□□ -0.45
CTTNBP2NL-201ENST00000271277 MROH2BQ7Z745 1585 aa12.19□□□□□ -0.46
CTTNBP2NL-201ENST00000271277 RSF1Q96T23 1441 aaPredicted RBP12.16□□□□□ -0.46
CTTNBP2NL-201ENST00000271277 SMARCA4P51532 1647 aa12.15□□□□□ -0.47
CTTNBP2NL-201ENST00000271277 CECR2Q9BXF3 1484 aa12.14□□□□□ -0.47
CTTNBP2NL-201ENST00000271277 PRDM2Q13029 1718 aa12.04□□□□□ -0.48
CTTNBP2NL-201ENST00000271277 SMARCA2P51531 1590 aa12.02□□□□□ -0.49
CTTNBP2NL-201ENST00000271277 SHROOM4Q9ULL8 1493 aa11.96□□□□□ -0.5
CTTNBP2NL-201ENST00000271277 TOP2AP11388 1531 aaKnown RBP11.94□□□□□ -0.5
CTTNBP2NL-201ENST00000271277 BIVM-ERCC5R4GMW8 1640 aa11.78□□□□□ -0.52
CTTNBP2NL-201ENST00000271277 HMGXB3Q12766 1538 aa11.71□□□□□ -0.54
CTTNBP2NL-201ENST00000271277 WDR97A6NE52 1622 aa11.7□□□□□ -0.54
CTTNBP2NL-201ENST00000271277 CCDC88BA6NC98 1476 aa11.68□□□□□ -0.54
CTTNBP2NL-201ENST00000271277 SYNJ1O43426 1573 aa11.66□□□□□ -0.54
CTTNBP2NL-201ENST00000271277 ATAD2BQ9ULI0 1458 aa11.61□□□□□ -0.55
CTTNBP2NL-201ENST00000271277 CHIC1Q5VXU3 224 aa11.58□□□□□ -0.56
CTTNBP2NL-201ENST00000271277 ABCC8Q09428 1581 aa11.56□□□□□ -0.56
CTTNBP2NL-201ENST00000271277 TOP2BQ02880 1626 aa11.55□□□□□ -0.56
CTTNBP2NL-201ENST00000271277 LRRIQ1Q96JM4 1722 aa11.51□□□□□ -0.57
CTTNBP2NL-201ENST00000271277 NCAPD3P42695 1498 aa11.5□□□□□ -0.57
CTTNBP2NL-201ENST00000271277 KIF21BO75037 1637 aa11.44□□□□□ -0.58
CTTNBP2NL-201ENST00000271277 CUX1P39880 1505 aa11.4□□□□□ -0.58
CTTNBP2NL-201ENST00000271277 CC2D2AQ9P2K1 1620 aa11.4□□□□□ -0.59
CTTNBP2NL-201ENST00000271277 RUSC2Q8N2Y8 1516 aa11.39□□□□□ -0.59
CTTNBP2NL-201ENST00000271277 CFTRP13569 1480 aa11.35□□□□□ -0.59
CTTNBP2NL-201ENST00000271277 KIF21AQ7Z4S6 1674 aa11.31□□□□□ -0.6
CTTNBP2NL-201ENST00000271277 ABCA5Q8WWZ7 1642 aa11.28□□□□□ -0.6
CTTNBP2NL-201ENST00000271277 TARBP1Q13395 1621 aaKnown RBP11.28□□□□□ -0.6
CTTNBP2NL-201ENST00000271277 WRNQ14191 1432 aaPredicted RBP eCLIP11.22□□□□□ -0.61
CTTNBP2NL-201ENST00000271277 SOGA1O94964 1423 aa11.2□□□□□ -0.62
CTTNBP2NL-201ENST00000271277 PRXQ9BXM0 1461 aa11.2□□□□□ -0.62
CTTNBP2NL-201ENST00000271277 SUPT5HO00267 1087 aaKnown RBP11.18□□□□□ -0.62
CTTNBP2NL-201ENST00000271277 BAZ1BQ9UIG0 1483 aaKnown RBP11.18□□□□□ -0.62
CTTNBP2NL-201ENST00000271277 ERICH3Q5RHP9 1530 aa11.18□□□□□ -0.62
CTTNBP2NL-201ENST00000271277 CTTNBP2Q8WZ74 1663 aa11.14□□□□□ -0.63
CTTNBP2NL-201ENST00000271277 THOC2Q8NI27 1593 aaKnown RBP11.13□□□□□ -0.63
CTTNBP2NL-201ENST00000271277 PBRM1Q86U86 1689 aa11.12□□□□□ -0.63
CTTNBP2NL-201ENST00000271277 SAMD9Q5K651 1589 aa11.11□□□□□ -0.63
CTTNBP2NL-201ENST00000271277 CFAP43Q8NDM7 1665 aa11.1□□□□□ -0.63
CTTNBP2NL-201ENST00000271277 LAMC3Q9Y6N6 1575 aa11.09□□□□□ -0.63
CTTNBP2NL-201ENST00000271277 DNMBPQ6XZF7 1577 aa11.06□□□□□ -0.64
CTTNBP2NL-201ENST00000271277 URB2Q14146 1524 aaKnown RBP11.06□□□□□ -0.64
CTTNBP2NL-201ENST00000271277 ARAP1Q96P48 1450 aa11.05□□□□□ -0.64
CTTNBP2NL-201ENST00000271277 RAPGEF2Q9Y4G8 1499 aa11□□□□□ -0.65
CTTNBP2NL-201ENST00000271277 ABCA10Q8WWZ4 1543 aa10.99□□□□□ -0.65
CTTNBP2NL-201ENST00000271277 NESP48681 1621 aa10.98□□□□□ -0.65
CTTNBP2NL-201ENST00000271277 CUL7Q14999 1698 aa10.97□□□□□ -0.65
CTTNBP2NL-201ENST00000271277 WDR62O43379 1518 aa10.97□□□□□ -0.65
CTTNBP2NL-201ENST00000271277 ARHGEF11O15085 1522 aa10.96□□□□□ -0.66
CTTNBP2NL-201ENST00000271277 DNAJC5BQ9UF47 199 aa10.96□□□□□ -0.66
CTTNBP2NL-201ENST00000271277 PABPN1Q86U42 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
CTTNBP2NL-201ENST00000271277 CUX2O14529 1486 aa10.94□□□□□ -0.66
CTTNBP2NL-201ENST00000271277 LOC105371045A0A1W2PR82 267 aa10.94□□□□□ -0.66
CTTNBP2NL-201ENST00000271277 TOPBP1Q92547 1522 aa10.94□□□□□ -0.66
CTTNBP2NL-201ENST00000271277 EEA1Q15075 1411 aa10.93□□□□□ -0.66
CTTNBP2NL-201ENST00000271277 POLA1P09884 1462 aaPredicted RBP10.91□□□□□ -0.66
CTTNBP2NL-201ENST00000271277 SNAPC4Q5SXM2 1469 aa10.9□□□□□ -0.66
CTTNBP2NL-201ENST00000271277 TNIKQ9UKE5 1360 aa10.9□□□□□ -0.67
CTTNBP2NL-201ENST00000271277 DCAF8L2P0C7V8 631 aa10.89□□□□□ -0.67
CTTNBP2NL-201ENST00000271277 MAP3K1Q13233 1512 aa10.88□□□□□ -0.67
CTTNBP2NL-201ENST00000271277 FGD5Q6ZNL6 1462 aa10.87□□□□□ -0.67
CTTNBP2NL-201ENST00000271277 ADAMTS12P58397 1594 aa10.87□□□□□ -0.67
CTTNBP2NL-201ENST00000271277 ARHGAP35Q9NRY4 1499 aa10.87□□□□□ -0.67
CTTNBP2NL-201ENST00000271277 MAGI3Q5TCQ9 1506 aa10.85□□□□□ -0.67
CTTNBP2NL-201ENST00000271277 CADPSQ9ULU8 1353 aa10.85□□□□□ -0.67
CTTNBP2NL-201ENST00000271277 KDM5BQ9UGL1 1544 aa10.84□□□□□ -0.67
CTTNBP2NL-201ENST00000271277 CEP162Q5TB80 1403 aa10.84□□□□□ -0.67
CTTNBP2NL-201ENST00000271277 SHROOM2Q13796 1616 aa10.83□□□□□ -0.68
CTTNBP2NL-201ENST00000271277 PCF11O94913 1555 aaKnown RBP10.81□□□□□ -0.68
CTTNBP2NL-201ENST00000271277 GOLGA3Q08378 1498 aa10.8□□□□□ -0.68
CTTNBP2NL-201ENST00000271277 FANCD2Q9BXW9 1451 aa10.8□□□□□ -0.68
CTTNBP2NL-201ENST00000271277 CEP164Q9UPV0 1460 aa10.8□□□□□ -0.68
CTTNBP2NL-201ENST00000271277 DENND4BO75064 1496 aaPredicted RBP10.79□□□□□ -0.68
CTTNBP2NL-201ENST00000271277 EIF4G3O43432 1585 aaKnown RBP10.79□□□□□ -0.68
CTTNBP2NL-201ENST00000271277 IGF1RP08069 1367 aa10.78□□□□□ -0.68
CTTNBP2NL-201ENST00000271277 CLIP1P30622 1438 aa10.77□□□□□ -0.68
CTTNBP2NL-201ENST00000271277 ADCY10Q96PN6 1610 aa10.77□□□□□ -0.69
CTTNBP2NL-201ENST00000271277 TIAM1Q13009 1591 aa10.76□□□□□ -0.69
CTTNBP2NL-201ENST00000271277 CROCC2H7BZ55 1655 aa10.75□□□□□ -0.69
CTTNBP2NL-201ENST00000271277 CEP170Q5SW79 1584 aa10.73□□□□□ -0.69
CTTNBP2NL-201ENST00000271277 RAD54L2Q9Y4B4 1467 aa10.72□□□□□ -0.69
CTTNBP2NL-201ENST00000271277 GRIN2BQ13224 1484 aa10.7□□□□□ -0.7
CTTNBP2NL-201ENST00000271277 AQRO60306 1485 aaKnown RBP eCLIP10.7□□□□□ -0.7
CTTNBP2NL-201ENST00000271277 RRBP1Q9P2E9 1410 aaKnown RBP10.69□□□□□ -0.7
CTTNBP2NL-201ENST00000271277 VPS8Q8N3P4 1428 aa10.68□□□□□ -0.7
CTTNBP2NL-201ENST00000271277 MAPKBP1O60336 1514 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms