RNA–Protein interactions for RNA: ENST00000269122.7

CLTC-201, Transcript of clathrin heavy chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTC, Length 7,760 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-201ENST00000269122 DCAF8L2P0C7V8 631 aa13.55□□□□□ -0.24
CLTC-201ENST00000269122 EHMT2Q96KQ7 1210 aa13.08□□□□□ -0.32
CLTC-201ENST00000269122 SUPT5HO00267 1087 aaKnown RBP12.96□□□□□ -0.33
CLTC-201ENST00000269122 PELP1Q8IZL8 1130 aaKnown RBP12.8□□□□□ -0.36
CLTC-201ENST00000269122 PCGF6Q9BYE7 350 aa12.67□□□□□ -0.38
CLTC-201ENST00000269122 TTBK1Q5TCY1 1321 aaPredicted RBP12.66□□□□□ -0.38
CLTC-201ENST00000269122 SHROOM4Q9ULL8 1493 aa12.66□□□□□ -0.38
CLTC-201ENST00000269122 ERICH6Q7L0X2 663 aa12.62□□□□□ -0.39
CLTC-201ENST00000269122 MYT1Q01538 1121 aa12.58□□□□□ -0.4
CLTC-201ENST00000269122 YTHDC1Q96MU7 727 aaKnown RBP12.5□□□□□ -0.41
CLTC-201ENST00000269122 CENPBP07199 599 aaPredicted RBP12.39□□□□□ -0.43
CLTC-201ENST00000269122 FAM9AQ8IZU1 332 aaPredicted RBP12.36□□□□□ -0.43
CLTC-201ENST00000269122 CCER1Q8TC90 406 aaPredicted RBP12.24□□□□□ -0.45
CLTC-201ENST00000269122 RANGAP1P46060 587 aaPredicted RBP12.2□□□□□ -0.46
CLTC-201ENST00000269122 PPARGC1BQ86YN6 1023 aaKnown RBP12.16□□□□□ -0.46
CLTC-201ENST00000269122 APLP2Q06481 763 aa12.14□□□□□ -0.47
CLTC-201ENST00000269122 NEFLP07196 543 aa12.06□□□□□ -0.48
CLTC-201ENST00000269122 ZEB1P37275 1124 aaPredicted RBP12.02□□□□□ -0.49
CLTC-201ENST00000269122 ATP1B4Q9UN42 357 aaPredicted RBP11.94□□□□□ -0.5
CLTC-201ENST00000269122 HRCP23327 699 aa11.91□□□□□ -0.5
CLTC-201ENST00000269122 CNGB1Q14028 1251 aaPredicted RBP11.89□□□□□ -0.51
CLTC-201ENST00000269122 DAXXQ9UER7 740 aaPredicted RBP11.83□□□□□ -0.52
CLTC-201ENST00000269122 BCANQ96GW7 911 aa11.77□□□□□ -0.52
CLTC-201ENST00000269122 POLR3GLQ9BT43 218 aa11.75□□□□□ -0.53
CLTC-201ENST00000269122 TRIM41Q8WV44 630 aa11.74□□□□□ -0.53
CLTC-201ENST00000269122 GTF3C3Q9Y5Q9 886 aa11.74□□□□□ -0.53
CLTC-201ENST00000269122 TRIM26Q12899 539 aaPredicted RBP11.71□□□□□ -0.54
CLTC-201ENST00000269122 UBTFP17480 764 aaKnown RBP11.7□□□□□ -0.54
CLTC-201ENST00000269122 RTL5Q5HYW3 569 aaPredicted RBP11.69□□□□□ -0.54
CLTC-201ENST00000269122 LOC105371045A0A1W2PR82 267 aa11.68□□□□□ -0.54
CLTC-201ENST00000269122 ITGAEP38570 1179 aa11.67□□□□□ -0.54
CLTC-201ENST00000269122 NISCHQ9Y2I1 1504 aa11.66□□□□□ -0.54
CLTC-201ENST00000269122 DIEXFQ68CQ4 756 aaKnown RBP11.64□□□□□ -0.55
CLTC-201ENST00000269122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.63□□□□□ -0.55
CLTC-201ENST00000269122 CHIC1Q5VXU3 224 aa11.61□□□□□ -0.55
CLTC-201ENST00000269122 ZNF316A6NFI3 1004 aaPredicted RBP11.61□□□□□ -0.55
CLTC-201ENST00000269122 HNRNPUL2Q1KMD3 747 aaKnown RBP11.57□□□□□ -0.56
CLTC-201ENST00000269122 EIF5BO60841 1220 aaKnown RBP11.57□□□□□ -0.56
CLTC-201ENST00000269122 CLSPNQ9HAW4 1339 aa11.51□□□□□ -0.57
CLTC-201ENST00000269122 MYT1LQ9UL68 1186 aa11.5□□□□□ -0.57
CLTC-201ENST00000269122 BCL11AQ9H165 835 aa11.43□□□□□ -0.58
CLTC-201ENST00000269122 SLC4A1APQ9BWU0 796 aaKnown RBP11.37□□□□□ -0.59
CLTC-201ENST00000269122 CDK11AQ9UQ88 783 aaPredicted RBP11.37□□□□□ -0.59
CLTC-201ENST00000269122 NPM2Q86SE8 214 aaKnown RBP11.37□□□□□ -0.59
CLTC-201ENST00000269122 ACIN1Q9UKV3 1341 aaKnown RBP11.36□□□□□ -0.59
CLTC-201ENST00000269122 NBR1Q14596 966 aa11.35□□□□□ -0.59
CLTC-201ENST00000269122 NEUROD1Q13562 356 aa11.3□□□□□ -0.6
CLTC-201ENST00000269122 ARXQ96QS3 562 aa11.3□□□□□ -0.6
CLTC-201ENST00000269122 SCAF1Q9H7N4 1312 aaKnown RBP11.27□□□□□ -0.61
CLTC-201ENST00000269122 FKBP8Q14318 412 aa11.21□□□□□ -0.62
CLTC-201ENST00000269122 ANP32AP39687 249 aaKnown RBP11.18□□□□□ -0.62
CLTC-201ENST00000269122 RTN4Q9NQC3 1192 aaKnown RBP11.14□□□□□ -0.63
CLTC-201ENST00000269122 ANP32CO43423 234 aa11.14□□□□□ -0.63
CLTC-201ENST00000269122 FAM50AQ14320 339 aaKnown RBP11.14□□□□□ -0.63
CLTC-201ENST00000269122 ZNF326Q5BKZ1 582 aaKnown RBP11.11□□□□□ -0.63
CLTC-201ENST00000269122 GLIPR1L2Q4G1C9 344 aa11.1□□□□□ -0.63
CLTC-201ENST00000269122 IRX6P78412 446 aaPredicted RBP11.09□□□□□ -0.63
CLTC-201ENST00000269122 TRIM52Q96A61 297 aa11.06□□□□□ -0.64
CLTC-201ENST00000269122 CANXP27824 592 aaKnown RBP11.05□□□□□ -0.64
CLTC-201ENST00000269122 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
CLTC-201ENST00000269122 SALL2Q9Y467 1007 aaPredicted RBP11.03□□□□□ -0.64
CLTC-201ENST00000269122 AMER1Q5JTC6 1135 aaPredicted RBP10.98□□□□□ -0.65
CLTC-201ENST00000269122 ZBTB47Q9UFB7 747 aaPredicted RBP10.97□□□□□ -0.65
CLTC-201ENST00000269122 PLPPR3Q6T4P5 718 aa10.97□□□□□ -0.65
CLTC-201ENST00000269122 ANP32BQ92688 251 aaKnown RBP10.95□□□□□ -0.66
CLTC-201ENST00000269122 HSP90AA1P07900 732 aaKnown RBP10.95□□□□□ -0.66
CLTC-201ENST00000269122 SENP3-EIF4A1A0A087X0R7 540 aa10.95□□□□□ -0.66
CLTC-201ENST00000269122 FAM9BQ8IZU0 186 aa10.94□□□□□ -0.66
CLTC-201ENST00000269122 ARID3CA6NKF2 412 aa10.94□□□□□ -0.66
CLTC-201ENST00000269122 HNRNPUQ00839 825 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLTC-201ENST00000269122 ANP32EQ9BTT0 268 aa10.92□□□□□ -0.66
CLTC-201ENST00000269122 DDX10Q13206 875 aaKnown RBP10.9□□□□□ -0.66
CLTC-201ENST00000269122 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.9□□□□□ -0.67
CLTC-201ENST00000269122 MIER1Q8N108 512 aa10.89□□□□□ -0.67
CLTC-201ENST00000269122 FBLN2P98095 1184 aa10.89□□□□□ -0.67
CLTC-201ENST00000269122 HIRIP3Q9BW71 556 aaPredicted RBP10.87□□□□□ -0.67
CLTC-201ENST00000269122 PABPN1Q86U42 306 aaKnown RBP eCLIP10.87□□□□□ -0.67
CLTC-201ENST00000269122 ARID4BQ4LE39 1312 aaPredicted RBP10.86□□□□□ -0.67
CLTC-201ENST00000269122 CCDC136Q96JN2 1154 aa10.85□□□□□ -0.67
CLTC-201ENST00000269122 TPRNQ4KMQ1 711 aa10.85□□□□□ -0.67
CLTC-201ENST00000269122 LAS1LQ9Y4W2 734 aaKnown RBP10.82□□□□□ -0.68
CLTC-201ENST00000269122 NAP1L5Q96NT1 182 aaPredicted RBP10.82□□□□□ -0.68
CLTC-201ENST00000269122 SENP3Q9H4L4 574 aaPredicted RBP10.78□□□□□ -0.68
CLTC-201ENST00000269122 P3H3Q8IVL6 736 aa10.77□□□□□ -0.69
CLTC-201ENST00000269122 UPF2Q9HAU5 1272 aaKnown RBP10.77□□□□□ -0.69
CLTC-201ENST00000269122 ARID3AQ99856 593 aa10.76□□□□□ -0.69
CLTC-201ENST00000269122 TRIM44Q96DX7 344 aaPredicted RBP10.75□□□□□ -0.69
CLTC-201ENST00000269122 ZBTB7CA1YPR0 619 aa10.73□□□□□ -0.69
CLTC-201ENST00000269122 NEFMP07197 916 aa10.72□□□□□ -0.69
CLTC-201ENST00000269122 PLEKHG5O94827 1062 aa10.71□□□□□ -0.69
CLTC-201ENST00000269122 DEKP35659 375 aaKnown RBP10.71□□□□□ -0.69
CLTC-201ENST00000269122 NCLP19338 710 aaKnown RBP10.7□□□□□ -0.7
CLTC-201ENST00000269122 DNTTIP2Q5QJE6 756 aaKnown RBP10.69□□□□□ -0.7
CLTC-201ENST00000269122 SUPT16HQ9Y5B9 1047 aaKnown RBP10.69□□□□□ -0.7
CLTC-201ENST00000269122 CSRNP3Q8WYN3 585 aa10.67□□□□□ -0.7
CLTC-201ENST00000269122 TNNT2P45379 298 aaPredicted RBP10.67□□□□□ -0.7
CLTC-201ENST00000269122 ZNF777Q9ULD5 760 aaPredicted RBP10.66□□□□□ -0.7
CLTC-201ENST00000269122 TMC1Q8TDI8 760 aa10.64□□□□□ -0.71
CLTC-201ENST00000269122 ABCC9O60706 1549 aa10.63□□□□□ -0.71
CLTC-201ENST00000269122 MRS2Q9HD23 443 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms